RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 USF2Q15853 346 aaPredicted RBP12.78□□□□□ -0.36
CAPN1-214ENST00000528165 P4HA3Q7Z4N8 544 aa12.78□□□□□ -0.36
CAPN1-214ENST00000528165 CPEB2Q7Z5Q1 589 aaKnown RBP12.78□□□□□ -0.36
CAPN1-214ENST00000528165 SLC35G3Q8N808 338 aa12.78□□□□□ -0.36
CAPN1-214ENST00000528165 PP6455Q8WZ26 134 aa12.78□□□□□ -0.36
CAPN1-214ENST00000528165 RBMXL1Q96E39 390 aaKnown RBP12.78□□□□□ -0.36
CAPN1-214ENST00000528165 MISP3Q96FF7 219 aa12.78□□□□□ -0.36
CAPN1-214ENST00000528165 HIST1H2BLQ99880 126 aa12.78□□□□□ -0.36
CAPN1-214ENST00000528165 IER2Q9BTL4 223 aa12.78□□□□□ -0.36
CAPN1-214ENST00000528165 CRLF2Q9HC73 371 aa12.78□□□□□ -0.36
CAPN1-214ENST00000528165 CA14Q9ULX7 337 aa12.78□□□□□ -0.36
CAPN1-214ENST00000528165 A0A087WZY1 265 aa12.78□□□□□ -0.36
CAPN1-214ENST00000528165 DHRS3O75911 302 aa12.78□□□□□ -0.36
CAPN1-214ENST00000528165 OR11L1Q8NGX0 322 aa12.78□□□□□ -0.36
CAPN1-214ENST00000528165 PHOSPHO2Q8TCD6 241 aa12.78□□□□□ -0.36
CAPN1-214ENST00000528165 ZNF160Q9HCG1 818 aa12.78□□□□□ -0.36
CAPN1-214ENST00000528165 ATXN7O15265 892 aaPredicted RBP12.77□□□□□ -0.36
CAPN1-214ENST00000528165 THEGLP0DJG4 465 aa12.77□□□□□ -0.36
CAPN1-214ENST00000528165 FOLR1P15328 257 aa12.77□□□□□ -0.36
CAPN1-214ENST00000528165 FBXW4P57775 412 aa12.77□□□□□ -0.36
CAPN1-214ENST00000528165 CHAF1BQ13112 559 aa12.77□□□□□ -0.36
CAPN1-214ENST00000528165 MYBPHQ13203 477 aa12.77□□□□□ -0.36
CAPN1-214ENST00000528165 SMAD4Q13485 552 aaKnown RBP12.77□□□□□ -0.36
CAPN1-214ENST00000528165 TAF9Q16594 264 aa12.77□□□□□ -0.36
CAPN1-214ENST00000528165 ZNF385CQ66K41 422 aaPredicted RBP12.77□□□□□ -0.36
CAPN1-214ENST00000528165 SLC25A47Q6Q0C1 308 aa12.77□□□□□ -0.36
CAPN1-214ENST00000528165 C16orf47Q6ZP98 133 aaPredicted RBP12.77□□□□□ -0.36
CAPN1-214ENST00000528165 SNX22Q96L94 193 aa12.77□□□□□ -0.36
CAPN1-214ENST00000528165 PLEKHF2Q9H8W4 249 aa12.77□□□□□ -0.36
CAPN1-214ENST00000528165 PIGLQ9Y2B2 252 aa12.77□□□□□ -0.36
CAPN1-214ENST00000528165 CDH23Q9H251 3354 aa12.77□□□□□ -0.37
CAPN1-214ENST00000528165 ADAMTS9Q9P2N4 1935 aa12.77□□□□□ -0.37
CAPN1-214ENST00000528165 PHOX2AO14813 284 aa12.77□□□□□ -0.37
CAPN1-214ENST00000528165 ONECUT2O95948 504 aa12.77□□□□□ -0.37
CAPN1-214ENST00000528165 DTYMKP23919 212 aa12.77□□□□□ -0.37
CAPN1-214ENST00000528165 TLE4Q04727 773 aa12.77□□□□□ -0.37
CAPN1-214ENST00000528165 MYO7BQ6PIF6 2116 aa12.77□□□□□ -0.37
CAPN1-214ENST00000528165 CCDC71LQ8N9Z2 235 aa12.77□□□□□ -0.37
CAPN1-214ENST00000528165 SUMF1Q8NBK3 374 aa12.77□□□□□ -0.37
CAPN1-214ENST00000528165 OR5C1Q8NGR4 320 aa12.77□□□□□ -0.37
CAPN1-214ENST00000528165 CLDND2Q8NHS1 167 aa12.77□□□□□ -0.37
CAPN1-214ENST00000528165 TMEM171Q8WVE6 324 aa12.77□□□□□ -0.37
CAPN1-214ENST00000528165 GNPNAT1Q96EK6 184 aaPredicted RBP12.77□□□□□ -0.37
CAPN1-214ENST00000528165 ANGPTL4Q9BY76 406 aa12.77□□□□□ -0.37
CAPN1-214ENST00000528165 UNC80Q8N2C7 3258 aa12.77□□□□□ -0.37
CAPN1-214ENST00000528165 F5H5K5 113 aa12.76□□□□□ -0.37
CAPN1-214ENST00000528165 MKRN2OSH3BPM6 223 aa12.76□□□□□ -0.37
CAPN1-214ENST00000528165 HBE1P02100 147 aa12.76□□□□□ -0.37
CAPN1-214ENST00000528165 OPN1LWP04000 364 aa12.76□□□□□ -0.37
CAPN1-214ENST00000528165 MYOGP15173 224 aa12.76□□□□□ -0.37
CAPN1-214ENST00000528165 FGF7P21781 194 aa12.76□□□□□ -0.37
CAPN1-214ENST00000528165 NKX2-1P43699 371 aaPredicted RBP12.76□□□□□ -0.37
CAPN1-214ENST00000528165 C9orf50Q5SZB4 431 aa12.76□□□□□ -0.37
CAPN1-214ENST00000528165 NKX2-4Q9H2Z4 354 aa12.76□□□□□ -0.37
CAPN1-214ENST00000528165 PITPNC1Q9UKF7 332 aa12.76□□□□□ -0.37
CAPN1-214ENST00000528165 DOCK8Q8NF50 2099 aa12.76□□□□□ -0.37
CAPN1-214ENST00000528165 CLDN34H7C241 214 aa12.76□□□□□ -0.37
CAPN1-214ENST00000528165 CDS2O95674 445 aa12.76□□□□□ -0.37
CAPN1-214ENST00000528165 PGA5P0DJD9 388 aa12.76□□□□□ -0.37
CAPN1-214ENST00000528165 CD200P41217 278 aa12.76□□□□□ -0.37
CAPN1-214ENST00000528165 SUMO3P55854 103 aaPredicted RBP12.76□□□□□ -0.37
CAPN1-214ENST00000528165 VAMP2P63027 116 aa12.76□□□□□ -0.37
CAPN1-214ENST00000528165 MVB12AQ96EY5 273 aa12.76□□□□□ -0.37
CAPN1-214ENST00000528165 CRISPLD2Q9H0B8 497 aa12.76□□□□□ -0.37
CAPN1-214ENST00000528165 NKX2-6A6NCS4 301 aa12.75□□□□□ -0.37
CAPN1-214ENST00000528165 C9J4A7 227 aa12.75□□□□□ -0.37
CAPN1-214ENST00000528165 SSSCA1O60232 199 aa12.75□□□□□ -0.37
CAPN1-214ENST00000528165 PAX1P15863 534 aa12.75□□□□□ -0.37
CAPN1-214ENST00000528165 MTCP1P56278 107 aa12.75□□□□□ -0.37
CAPN1-214ENST00000528165 RAB4BP61018 213 aa12.75□□□□□ -0.37
CAPN1-214ENST00000528165 FOXO1Q12778 655 aa12.75□□□□□ -0.37
CAPN1-214ENST00000528165 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-214ENST00000528165 CDCP2Q5VXM1 449 aa12.75□□□□□ -0.37
CAPN1-214ENST00000528165 CMTM1Q8IZ96 169 aa12.75□□□□□ -0.37
CAPN1-214ENST00000528165 TMEM252Q8N6L7 170 aa12.75□□□□□ -0.37
CAPN1-214ENST00000528165 TP53RKQ96S44 253 aa12.75□□□□□ -0.37
CAPN1-214ENST00000528165 LRRC61Q9BV99 259 aa12.75□□□□□ -0.37
CAPN1-214ENST00000528165 METTL9Q9H1A3 318 aa12.75□□□□□ -0.37
CAPN1-214ENST00000528165 TP53TG5Q9Y2B4 290 aa12.75□□□□□ -0.37
CAPN1-214ENST00000528165 V9GYS6 101 aa12.75□□□□□ -0.37
CAPN1-214ENST00000528165 ZNF732B4DXR9 585 aa12.75□□□□□ -0.37
CAPN1-214ENST00000528165 NOVA1P51513 510 aaKnown RBP12.75□□□□□ -0.37
CAPN1-214ENST00000528165 HERV-K104P61576 105 aa12.75□□□□□ -0.37
CAPN1-214ENST00000528165 RAB11AP62491 216 aa12.75□□□□□ -0.37
CAPN1-214ENST00000528165 TGIF2LXQ8IUE1 241 aa12.75□□□□□ -0.37
CAPN1-214ENST00000528165 C11orf1Q9H5F2 150 aa12.75□□□□□ -0.37
CAPN1-214ENST00000528165 LYRM2Q9NU23 88 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-214ENST00000528165 TCAPO15273 167 aa12.75□□□□□ -0.37
CAPN1-214ENST00000528165 TRAF3IP2O43734 574 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-214ENST00000528165 ANGPTL7O43827 346 aa12.75□□□□□ -0.37
CAPN1-214ENST00000528165 IGLV3-1P01715 115 aa12.75□□□□□ -0.37
CAPN1-214ENST00000528165 FUT3P21217 361 aa12.75□□□□□ -0.37
CAPN1-214ENST00000528165 FBLP22087 321 aaKnown RBP12.75□□□□□ -0.37
CAPN1-214ENST00000528165 BLKP51451 505 aa12.75□□□□□ -0.37
CAPN1-214ENST00000528165 ZNF41P51814 821 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-214ENST00000528165 RND2P52198 227 aa12.75□□□□□ -0.37
CAPN1-214ENST00000528165 H3F3AP84243 136 aa12.75□□□□□ -0.37
CAPN1-214ENST00000528165 RUNX1Q01196 453 aa12.75□□□□□ -0.37
CAPN1-214ENST00000528165 PNRC1Q12796 327 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-214ENST00000528165 JOSD1Q15040 202 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms