RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 TMEM187Q14656 261 aa15.15■□□□□ 0.02
USH1C-205ENST00000527020 FOXRED2Q8IWF2 684 aa15.15■□□□□ 0.02
USH1C-205ENST00000527020 Q8NFD4 153 aa15.15■□□□□ 0.02
USH1C-205ENST00000527020 PARPBPQ9NWS1 579 aa15.15■□□□□ 0.02
USH1C-205ENST00000527020 IL17BQ9UHF5 180 aa15.15■□□□□ 0.02
USH1C-205ENST00000527020 BDP1A6H8Y1 2624 aa15.14■□□□□ 0.01
USH1C-205ENST00000527020 PQLC2LA1A4F0 135 aa15.14■□□□□ 0.01
USH1C-205ENST00000527020 TSPAN4O14817 238 aa15.14■□□□□ 0.01
USH1C-205ENST00000527020 FCGR2CP31995 323 aa15.14■□□□□ 0.01
USH1C-205ENST00000527020 FXYD4P59646 89 aa15.14■□□□□ 0.01
USH1C-205ENST00000527020 MALLQ13021 153 aa15.14■□□□□ 0.01
USH1C-205ENST00000527020 SP6Q3SY56 376 aa15.14■□□□□ 0.01
USH1C-205ENST00000527020 OR2A2Q6IF42 318 aa15.14■□□□□ 0.01
USH1C-205ENST00000527020 SPERTQ8NA61 448 aa15.14■□□□□ 0.01
USH1C-205ENST00000527020 LHFPL5Q8TAF8 219 aa15.14■□□□□ 0.01
USH1C-205ENST00000527020 RNF141Q8WVD5 230 aa15.14■□□□□ 0.01
USH1C-205ENST00000527020 NAA60Q9H7X0 242 aa15.14■□□□□ 0.01
USH1C-205ENST00000527020 DOCK7Q96N67 2140 aa15.14■□□□□ 0.01
USH1C-205ENST00000527020 SYNGR4O95473 234 aa15.14■□□□□ 0.01
USH1C-205ENST00000527020 ACTL6AO96019 429 aa15.14■□□□□ 0.01
USH1C-205ENST00000527020 OR5AC1P0C628 307 aa15.14■□□□□ 0.01
USH1C-205ENST00000527020 FUT3P21217 361 aa15.14■□□□□ 0.01
USH1C-205ENST00000527020 CCNOP22674 350 aa15.14■□□□□ 0.01
USH1C-205ENST00000527020 MST1LQ2TV78 715 aa15.14■□□□□ 0.01
USH1C-205ENST00000527020 UQCC3Q6UW78 93 aa15.14■□□□□ 0.01
USH1C-205ENST00000527020 HPSE2Q8WWQ2 592 aa15.14■□□□□ 0.01
USH1C-205ENST00000527020 GALNT14Q96FL9 552 aa15.14■□□□□ 0.01
USH1C-205ENST00000527020 ZNF286AQ9HBT8 521 aa15.14■□□□□ 0.01
USH1C-205ENST00000527020 C5orf49A4QMS7 147 aa15.13■□□□□ 0.01
USH1C-205ENST00000527020 M0R296 226 aa15.13■□□□□ 0.01
USH1C-205ENST00000527020 SS18L1O75177 396 aaPredicted RBP15.13■□□□□ 0.01
USH1C-205ENST00000527020 DEDDO75618 318 aa15.13■□□□□ 0.01
USH1C-205ENST00000527020 ARHGDIBP52566 201 aa15.13■□□□□ 0.01
USH1C-205ENST00000527020 C3AR1Q16581 482 aa15.13■□□□□ 0.01
USH1C-205ENST00000527020 RPL7L1Q6DKI1 246 aaKnown RBP15.13■□□□□ 0.01
USH1C-205ENST00000527020 CCDC36Q8IYA8 594 aa15.13■□□□□ 0.01
USH1C-205ENST00000527020 RTN4IP1Q8WWV3 396 aaPredicted RBP15.13■□□□□ 0.01
USH1C-205ENST00000527020 MOB3AQ96BX8 217 aa15.13■□□□□ 0.01
USH1C-205ENST00000527020 LRRC46Q96FV0 321 aa15.13■□□□□ 0.01
USH1C-205ENST00000527020 HS3ST6Q96QI5 342 aa15.13■□□□□ 0.01
USH1C-205ENST00000527020 PAPOLGQ9BWT3 736 aaKnown RBP15.13■□□□□ 0.01
USH1C-205ENST00000527020 C12orf4Q9NQ89 552 aa15.13■□□□□ 0.01
USH1C-205ENST00000527020 OR2S2Q9NQN1 319 aa15.13■□□□□ 0.01
USH1C-205ENST00000527020 OR7C1O76099 320 aaPredicted RBP15.12■□□□□ 0.01
USH1C-205ENST00000527020 MT-CO3P00414 261 aa15.12■□□□□ 0.01
USH1C-205ENST00000527020 PMELP40967 661 aa15.12■□□□□ 0.01
USH1C-205ENST00000527020 PRDX4Q13162 271 aa15.12■□□□□ 0.01
USH1C-205ENST00000527020 TMEM164Q5U3C3 297 aa15.12■□□□□ 0.01
USH1C-205ENST00000527020 TMEM211Q6ICI0 200 aa15.12■□□□□ 0.01
USH1C-205ENST00000527020 SLC2A9Q9NRM0 540 aa15.12■□□□□ 0.01
USH1C-205ENST00000527020 ABI3Q9P2A4 366 aa15.12■□□□□ 0.01
USH1C-205ENST00000527020 ZNF629Q9UEG4 869 aaPredicted RBP15.12■□□□□ 0.01
USH1C-205ENST00000527020 STARD10Q9Y365 291 aa15.12■□□□□ 0.01
USH1C-205ENST00000527020 ZNF724A8MTY0 619 aa15.12■□□□□ 0.01
USH1C-205ENST00000527020 TRIM77I1YAP6 450 aa15.12■□□□□ 0.01
USH1C-205ENST00000527020 NUPL2O15504 423 aaKnown RBP15.12■□□□□ 0.01
USH1C-205ENST00000527020 COX5BP10606 129 aa15.12■□□□□ 0.01
USH1C-205ENST00000527020 BCL3P20749 454 aa15.12■□□□□ 0.01
USH1C-205ENST00000527020 AKR1C2P52895 323 aa15.12■□□□□ 0.01
USH1C-205ENST00000527020 AKR1C1Q04828 323 aa15.12■□□□□ 0.01
USH1C-205ENST00000527020 PHLDA2Q53GA4 152 aa15.12■□□□□ 0.01
USH1C-205ENST00000527020 ZNF442Q9H7R0 627 aa15.12■□□□□ 0.01
USH1C-205ENST00000527020 RNF122Q9H9V4 155 aa15.12■□□□□ 0.01
USH1C-205ENST00000527020 PCDHB16Q9NRJ7 776 aa15.12■□□□□ 0.01
USH1C-205ENST00000527020 DNASE2O00115 360 aaPredicted RBP15.11■□□□□ 0.01
USH1C-205ENST00000527020 IFNA21P01568 189 aa15.11■□□□□ 0.01
USH1C-205ENST00000527020 ADCYAP1P18509 176 aa15.11■□□□□ 0.01
USH1C-205ENST00000527020 RCC1P18754 421 aaPredicted RBP15.11■□□□□ 0.01
USH1C-205ENST00000527020 SRSF3P84103 164 aaKnown RBP15.11■□□□□ 0.01
USH1C-205ENST00000527020 ABCA11PQ4W5N1 156 aa15.11■□□□□ 0.01
USH1C-205ENST00000527020 NUFIP2Q7Z417 695 aaKnown RBP15.11■□□□□ 0.01
USH1C-205ENST00000527020 LRTM2Q8N967 370 aa15.11■□□□□ 0.01
USH1C-205ENST00000527020 OR4A4PQ8NGN8 299 aa15.11■□□□□ 0.01
USH1C-205ENST00000527020 OR11L1Q8NGX0 322 aa15.11■□□□□ 0.01
USH1C-205ENST00000527020 SLAMF9Q96A28 289 aa15.11■□□□□ 0.01
USH1C-205ENST00000527020 NARS2Q96I59 477 aaKnown RBP15.11■□□□□ 0.01
USH1C-205ENST00000527020 AMDHD2Q9Y303 409 aa15.11■□□□□ 0.01
USH1C-205ENST00000527020 TMEM218A2RU14 115 aa15.11■□□□□ 0.01
USH1C-205ENST00000527020 NGFP01138 241 aa15.11■□□□□ 0.01
USH1C-205ENST00000527020 RPL12P30050 165 aaKnown RBP15.11■□□□□ 0.01
USH1C-205ENST00000527020 UCP3P55916 312 aa15.11■□□□□ 0.01
USH1C-205ENST00000527020 PLGLB1Q02325 96 aa15.11■□□□□ 0.01
USH1C-205ENST00000527020 LYZL2Q7Z4W2 148 aa15.11■□□□□ 0.01
USH1C-205ENST00000527020 MDS2Q8NDY4 140 aa15.11■□□□□ 0.01
USH1C-205ENST00000527020 APH1AQ96BI3 265 aa15.11■□□□□ 0.01
USH1C-205ENST00000527020 MSI2Q96DH6 328 aaKnown RBP15.11■□□□□ 0.01
USH1C-205ENST00000527020 POM121Q96HA1 1249 aa15.11■□□□□ 0.01
USH1C-205ENST00000527020 C18orf12Q96KH6 178 aa15.11■□□□□ 0.01
USH1C-205ENST00000527020 PRRX2Q99811 253 aa15.11■□□□□ 0.01
USH1C-205ENST00000527020 LPAR3Q9UBY5 353 aa15.11■□□□□ 0.01
USH1C-205ENST00000527020 KCNIP3Q9Y2W7 256 aa15.11■□□□□ 0.01
USH1C-205ENST00000527020 ABCD4O14678 606 aa15.1■□□□□ 0.01
USH1C-205ENST00000527020 TAAR5O14804 337 aa15.1■□□□□ 0.01
USH1C-205ENST00000527020 SP1P08047 785 aa15.1■□□□□ 0.01
USH1C-205ENST00000527020 AADACP22760 399 aa15.1■□□□□ 0.01
USH1C-205ENST00000527020 MEOX1P50221 254 aa15.1■□□□□ 0.01
USH1C-205ENST00000527020 GPM6AP51674 278 aa15.1■□□□□ 0.01
USH1C-205ENST00000527020 DEFA5Q01523 94 aa15.1■□□□□ 0.01
USH1C-205ENST00000527020 TMEM268Q5VZI3 342 aa15.1■□□□□ 0.01
USH1C-205ENST00000527020 DHRS13Q6UX07 377 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms