RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 SCAND1P57086 179 aa13.79□□□□□ -0.2
CAPN1-205ENST00000526954 LOXL1Q08397 574 aaPredicted RBP13.79□□□□□ -0.2
CAPN1-205ENST00000526954 IL13RA2Q14627 380 aa13.79□□□□□ -0.2
CAPN1-205ENST00000526954 TMEM104Q8NE00 496 aa13.79□□□□□ -0.2
CAPN1-205ENST00000526954 CLDND2Q8NHS1 167 aa13.79□□□□□ -0.2
CAPN1-205ENST00000526954 SDSLQ96GA7 329 aa13.79□□□□□ -0.2
CAPN1-205ENST00000526954 GAL3ST1Q99999 423 aa13.79□□□□□ -0.2
CAPN1-205ENST00000526954 REG4Q9BYZ8 158 aa13.79□□□□□ -0.2
CAPN1-205ENST00000526954 BARHL1Q9BZE3 327 aa13.79□□□□□ -0.2
CAPN1-205ENST00000526954 PATZ1Q9HBE1 687 aaKnown RBP13.79□□□□□ -0.2
CAPN1-205ENST00000526954 IL36RNQ9UBH0 155 aa13.79□□□□□ -0.2
CAPN1-205ENST00000526954 MIOXQ9UGB7 285 aa13.79□□□□□ -0.2
CAPN1-205ENST00000526954 GLS2Q9UI32 602 aa13.79□□□□□ -0.2
CAPN1-205ENST00000526954 DOCK11Q5JSL3 2073 aa13.79□□□□□ -0.2
CAPN1-205ENST00000526954 MYO9AB2RTY4 2548 aa13.79□□□□□ -0.2
CAPN1-205ENST00000526954 MAP1AP78559 2803 aaPredicted RBP13.78□□□□□ -0.2
CAPN1-205ENST00000526954 CCDC160A6NGH7 325 aa13.78□□□□□ -0.2
CAPN1-205ENST00000526954 F5H0A9 414 aaPredicted RBP13.78□□□□□ -0.2
CAPN1-205ENST00000526954 SH2D1BO14796 132 aa13.78□□□□□ -0.2
CAPN1-205ENST00000526954 CRTAPO75718 401 aaPredicted RBP13.78□□□□□ -0.2
CAPN1-205ENST00000526954 WNT2P09544 360 aa13.78□□□□□ -0.2
CAPN1-205ENST00000526954 RORCP51449 518 aa13.78□□□□□ -0.2
CAPN1-205ENST00000526954 RBM11P57052 281 aaKnown RBP13.78□□□□□ -0.2
CAPN1-205ENST00000526954 LMO4P61968 165 aa13.78□□□□□ -0.2
CAPN1-205ENST00000526954 UNC119Q13432 240 aa13.78□□□□□ -0.2
CAPN1-205ENST00000526954 IDNKQ5T6J7 187 aa13.78□□□□□ -0.2
CAPN1-205ENST00000526954 OR10K2Q6IF99 312 aa13.78□□□□□ -0.2
CAPN1-205ENST00000526954 LYPD2Q6UXB3 125 aa13.78□□□□□ -0.2
CAPN1-205ENST00000526954 SLC36A1Q7Z2H8 476 aa13.78□□□□□ -0.2
CAPN1-205ENST00000526954 LINC00596Q86U02 117 aa13.78□□□□□ -0.2
CAPN1-205ENST00000526954 CD177Q8N6Q3 437 aa13.78□□□□□ -0.2
CAPN1-205ENST00000526954 PTX4Q96A99 478 aa13.78□□□□□ -0.2
CAPN1-205ENST00000526954 KCTD12Q96CX2 325 aaKnown RBP13.78□□□□□ -0.2
CAPN1-205ENST00000526954 DGCR14Q96DF8 476 aaKnown RBP13.78□□□□□ -0.2
CAPN1-205ENST00000526954 ZNF665Q9H7R5 613 aa13.78□□□□□ -0.2
CAPN1-205ENST00000526954 ABRACLQ9P1F3 81 aa13.78□□□□□ -0.2
CAPN1-205ENST00000526954 PCDHB10Q9UN67 800 aa13.78□□□□□ -0.2
CAPN1-205ENST00000526954 ST3GAL6Q9Y274 331 aa13.78□□□□□ -0.2
CAPN1-205ENST00000526954 AKAP9Q99996 3911 aa13.78□□□□□ -0.2
CAPN1-205ENST00000526954 CR1P17927 2039 aa13.78□□□□□ -0.2
CAPN1-205ENST00000526954 A0A0B4J203 849 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 TMEM272A0A1B0GTI8 110 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 FAM90A10PA6NDY2 464 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 FAM90A18PA6NE21 464 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 FAM90A16PA6NEW6 464 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 A6NHS1 94 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 FAM90A20PA6NIJ5 464 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 NKX6-3A6NJ46 265 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 FAM90A8PA6NJQ4 464 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 FAM90A7PA6NKC0 464 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 FAM90A22PA8MWA6 464 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 FAM90A12PA8MX19 464 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 FAM90A5PA8MXJ8 464 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 FAM90A23PA8MXZ1 464 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 SIGLEC5O15389 551 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 HAND1O96004 215 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 IGHV2-5P01817 119 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 CHRM2P08172 466 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 FAM90A15PP0C7V4 464 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 FAM90A13PP0C7W8 464 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 FAM90A14PP0C7W9 464 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 FAM90A24PP0C7X0 464 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 LMO1P25800 156 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 GABRA2P47869 451 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 RPS27AP62979 156 aaKnown RBP13.77□□□□□ -0.21
CAPN1-205ENST00000526954 DYNC1I2Q13409 638 aaKnown RBP13.77□□□□□ -0.21
CAPN1-205ENST00000526954 MPV17LQ2QL34 196 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 PIGYQ3MUY2 71 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 Q6P435 159 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 ZNF561Q8N587 486 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 DYNC2LI1Q8TCX1 351 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 RAB39BQ96DA2 213 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 MED30Q96HR3 178 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 Q96M66 194 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 GAFA1Q96PS6 74 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 CCL13Q99616 98 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 TM2D1Q9BX74 207 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 TMEM59Q9BXS4 323 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 SELENOIQ9C0D9 397 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 KCNK15Q9H427 330 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 BANF2Q9H503 90 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 NARFLQ9H6Q4 476 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 IFT22Q9H7X7 185 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 OR14J1Q9UGF5 321 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 OR5V1Q9UGF6 321 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 RAB22AQ9UL26 194 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 MAB21L2Q9Y586 359 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 VPS13CQ709C8 3753 aa13.77□□□□□ -0.21
CAPN1-205ENST00000526954 RNF223E7ERA6 249 aa13.76□□□□□ -0.21
CAPN1-205ENST00000526954 TMPRSS2O15393 492 aa13.76□□□□□ -0.21
CAPN1-205ENST00000526954 ADAM20O43506 726 aa13.76□□□□□ -0.21
CAPN1-205ENST00000526954 MPIG6BO95866 241 aa13.76□□□□□ -0.21
CAPN1-205ENST00000526954 RPS2P15880 293 aaKnown RBP13.76□□□□□ -0.21
CAPN1-205ENST00000526954 RAB6AP20340 208 aa13.76□□□□□ -0.21
CAPN1-205ENST00000526954 DUSP1P28562 367 aa13.76□□□□□ -0.21
CAPN1-205ENST00000526954 CEBPDP49716 269 aaPredicted RBP13.76□□□□□ -0.21
CAPN1-205ENST00000526954 SNU13P55769 128 aaKnown RBP13.76□□□□□ -0.21
CAPN1-205ENST00000526954 IL13RA1P78552 427 aa13.76□□□□□ -0.21
CAPN1-205ENST00000526954 FOXB2Q5VYV0 432 aa13.76□□□□□ -0.21
CAPN1-205ENST00000526954 SPNS3Q6ZMD2 512 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms