RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 MED30Q96HR3 178 aa10.06□□□□□ -0.8
CCDC90B-205ENST00000525916 PGAM5Q96HS1 289 aa10.06□□□□□ -0.8
CCDC90B-205ENST00000525916 CNBD2Q96M20 576 aa10.06□□□□□ -0.8
CCDC90B-205ENST00000525916 PRSS22Q9GZN4 317 aa10.06□□□□□ -0.8
CCDC90B-205ENST00000525916 PBOV1Q9GZY1 135 aa10.06□□□□□ -0.8
CCDC90B-205ENST00000525916 TLNRD1Q9H1K6 362 aa10.06□□□□□ -0.8
CCDC90B-205ENST00000525916 DUSP21Q9H596 190 aa10.06□□□□□ -0.8
CCDC90B-205ENST00000525916 EXOSC1Q9Y3B2 195 aaKnown RBP10.06□□□□□ -0.8
CCDC90B-205ENST00000525916 SNX5Q9Y5X3 404 aa10.06□□□□□ -0.8
CCDC90B-205ENST00000525916 RYR2Q92736 4967 aa10.06□□□□□ -0.8
CCDC90B-205ENST00000525916 BIRC6Q9NR09 4857 aa10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 hCG_38984A0A1B0GV85 526 aa10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 LOC110117498-PIK3R3F6TDL0 507 aa10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 TBX1O43435 398 aa10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 AKR7A2O43488 359 aa10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 DUS4LO95620 317 aaKnown RBP10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 TTRP02766 147 aa10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 CDK1P06493 297 aa10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 ACAA1P09110 424 aaPredicted RBP10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 CFL1P23528 166 aaKnown RBP10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 COX7A1P24310 79 aa10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 CRHBPP24387 322 aa10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 DDOSTP39656 456 aa10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 VDAC2P45880 294 aaPredicted RBP10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 GABRA2P47869 451 aa10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 FAM3AP98173 230 aa10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 RBM48Q5RL73 367 aaKnown RBP10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 Q6ZSR3 168 aa10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 AHSA2Q719I0 299 aa10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 KRT74Q7RTS7 529 aa10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 FAM220AQ7Z4H9 259 aa10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 CATSPERDQ86XM0 798 aa10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 ELMOD2Q8IZ81 293 aa10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 ZNF485Q8NCK3 441 aa10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 ZNRF1Q8ND25 227 aa10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 TMEM185AQ8NFB2 350 aa10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 OR5AU1Q8NGC0 362 aa10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 HAVCR2Q8TDQ0 301 aa10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 RPL3LQ92901 407 aaKnown RBP10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 REEP6Q96HR9 211 aa10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 LYZL4Q96KX0 146 aa10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 C4orf36Q96KX1 117 aa10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 PAPOLGQ9BWT3 736 aaKnown RBP10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 ISG20L2Q9H9L3 353 aaKnown RBP10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 BRD7Q9NPI1 651 aa10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 C19orf12Q9NSK7 152 aa10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 PAK1IP1Q9NWT1 392 aaPredicted RBP10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 SCN3BQ9NY72 215 aa10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 GNG8Q9UK08 70 aa10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 OR52A1Q9UKL2 312 aa10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 TPRKBQ9Y3C4 175 aa10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 U3KQK5 164 aa10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 TENM2Q9NT68 2774 aa10.05□□□□□ -0.8
CCDC90B-205ENST00000525916 A6NDX4 124 aa10.04□□□□□ -0.8
CCDC90B-205ENST00000525916 VGLL3A8MV65 326 aa10.04□□□□□ -0.8
CCDC90B-205ENST00000525916 SYNGR1O43759 233 aa10.04□□□□□ -0.8
CCDC90B-205ENST00000525916 MYL12AP19105 171 aa10.04□□□□□ -0.8
CCDC90B-205ENST00000525916 C21orf33P30042 268 aaPredicted RBP10.04□□□□□ -0.8
CCDC90B-205ENST00000525916 GNALP38405 381 aa10.04□□□□□ -0.8
CCDC90B-205ENST00000525916 LGALS4P56470 323 aa10.04□□□□□ -0.8
CCDC90B-205ENST00000525916 ERVFRD-1P60508 538 aa10.04□□□□□ -0.8
CCDC90B-205ENST00000525916 BLCAPP62952 87 aa10.04□□□□□ -0.8
CCDC90B-205ENST00000525916 MRPL28Q13084 256 aaKnown RBP10.04□□□□□ -0.8
CCDC90B-205ENST00000525916 MED21Q13503 144 aa10.04□□□□□ -0.8
CCDC90B-205ENST00000525916 TIGD6Q17RP2 521 aa10.04□□□□□ -0.8
CCDC90B-205ENST00000525916 TCTEX1D4Q5JR98 221 aa10.04□□□□□ -0.8
CCDC90B-205ENST00000525916 OR10Z1Q8NGY1 313 aa10.04□□□□□ -0.8
CCDC90B-205ENST00000525916 OR2G2Q8NGZ5 317 aa10.04□□□□□ -0.8
CCDC90B-205ENST00000525916 OR52N1Q8NH53 320 aa10.04□□□□□ -0.8
CCDC90B-205ENST00000525916 RPS4Y2Q8TD47 263 aa10.04□□□□□ -0.8
CCDC90B-205ENST00000525916 NLKQ9UBE8 527 aa10.04□□□□□ -0.8
CCDC90B-205ENST00000525916 CLEC2DQ9UHP7 191 aa10.04□□□□□ -0.8
CCDC90B-205ENST00000525916 RHBDD3Q9Y3P4 386 aa10.04□□□□□ -0.8
CCDC90B-205ENST00000525916 LRRC42Q9Y546 428 aa10.04□□□□□ -0.8
CCDC90B-205ENST00000525916 IGKV1D-17A0A075B6S4 117 aa10.03□□□□□ -0.8
CCDC90B-205ENST00000525916 A0A1B0GTI1 187 aa10.03□□□□□ -0.8
CCDC90B-205ENST00000525916 OR2AT4A6NND4 320 aa10.03□□□□□ -0.8
CCDC90B-205ENST00000525916 PTGES3LE9PB15 166 aa10.03□□□□□ -0.8
CCDC90B-205ENST00000525916 J3QLW9 94 aa10.03□□□□□ -0.8
CCDC90B-205ENST00000525916 RPP14O95059 124 aaKnown RBP10.03□□□□□ -0.8
CCDC90B-205ENST00000525916 ATP6V1B1P15313 513 aa10.03□□□□□ -0.8
CCDC90B-205ENST00000525916 ZNF19P17023 458 aa10.03□□□□□ -0.8
CCDC90B-205ENST00000525916 CCL1P22362 96 aa10.03□□□□□ -0.8
CCDC90B-205ENST00000525916 KIR3DL2P43630 455 aa10.03□□□□□ -0.8
CCDC90B-205ENST00000525916 GSK3AP49840 483 aa10.03□□□□□ -0.8
CCDC90B-205ENST00000525916 CCR9P51686 369 aa10.03□□□□□ -0.8
CCDC90B-205ENST00000525916 NANOS3P60323 173 aaKnown RBP10.03□□□□□ -0.8
CCDC90B-205ENST00000525916 IRF3Q14653 427 aa10.03□□□□□ -0.8
CCDC90B-205ENST00000525916 BCL2L15Q5TBC7 163 aa10.03□□□□□ -0.8
CCDC90B-205ENST00000525916 TMPRSS11AQ6ZMR5 421 aa10.03□□□□□ -0.8
CCDC90B-205ENST00000525916 RNF144BQ7Z419 303 aa10.03□□□□□ -0.8
CCDC90B-205ENST00000525916 PRSS35Q8N3Z0 413 aa10.03□□□□□ -0.8
CCDC90B-205ENST00000525916 STX19Q8N4C7 294 aa10.03□□□□□ -0.8
CCDC90B-205ENST00000525916 C11orf42Q8N5U0 333 aa10.03□□□□□ -0.8
CCDC90B-205ENST00000525916 MYDGFQ969H8 173 aa10.03□□□□□ -0.8
CCDC90B-205ENST00000525916 YTHDF1Q9BYJ9 559 aaKnown RBP10.03□□□□□ -0.8
CCDC90B-205ENST00000525916 FGF23Q9GZV9 251 aaPredicted RBP10.03□□□□□ -0.8
CCDC90B-205ENST00000525916 HEXA-AS1Q9H8Q6 139 aa10.03□□□□□ -0.8
CCDC90B-205ENST00000525916 FRRS1LQ9P0K9 344 aa10.03□□□□□ -0.8
CCDC90B-205ENST00000525916 SLC22A13Q9Y226 551 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms