RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 TRIP13Q15645 432 aaPredicted RBP3.73□□□□□ -1.81
CD44-220ENST00000525688 ATP6AP1Q15904 470 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 GFI1BQ5VTD9 330 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 SLC36A1Q7Z2H8 476 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 HORMAD1Q86X24 394 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 NIT1Q86X76 327 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 DHFR2Q86XF0 187 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 CCDC71Q8IV32 467 aaPredicted RBP3.73□□□□□ -1.81
CD44-220ENST00000525688 SLC30A8Q8IWU4 369 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 ATPAF2Q8N5M1 289 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 GPR32P1Q8NGA4 272 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 OR8U1Q8NH10 309 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 C16orf78Q8WTQ4 265 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 NPRL2Q8WTW4 380 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 TRUB1Q8WWH5 349 aaKnown RBP3.73□□□□□ -1.81
CD44-220ENST00000525688 EEF1AKMT3Q96AZ1 226 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 CMTM7Q96FZ5 175 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 RILPQ96NA2 401 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 PHB2Q99623 299 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 GPR21Q99679 349 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 PDCD1LG2Q9BQ51 273 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 OCR1Q9BZK8 76 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 ELL3Q9HB65 397 aaPredicted RBP3.73□□□□□ -1.81
CD44-220ENST00000525688 ABCC13Q9NSE7 274 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 ZNF446Q9NWS9 450 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 TAS2R16Q9NYV7 291 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 TREM2Q9NZC2 230 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 GLTPQ9NZD2 209 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 CTSZQ9UBR2 303 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 CD84Q9UIB8 345 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 FBXO5Q9UKT4 447 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 TP53TG1Q9Y2A0 90 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 KLF12Q9Y4X4 402 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 OR51B4Q9Y5P0 310 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 TDRD15B5MCY1 1934 aaKnown RBP3.73□□□□□ -1.81
CD44-220ENST00000525688 WDR87Q6ZQQ6 2873 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 IGHV3OR16-10A0A075B7F0 116 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 ZNF816-ZNF321PA0A0X1KG74 233 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 H7C423 109 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 M0QZK8 103 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 NME4O00746 187 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 NUPL2O15504 423 aaKnown RBP3.72□□□□□ -1.81
CD44-220ENST00000525688 FKBP6O75344 327 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 MED6O75586 246 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 OR2B3O76000 313 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 SLC22A5O76082 557 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 OR9G9P0C7N8 305 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 RAB5AP20339 215 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 GRPRP30550 384 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 RPA3P35244 121 aaPredicted RBP3.72□□□□□ -1.81
CD44-220ENST00000525688 IFNGR2P38484 337 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 SNRPFP62306 86 aaKnown RBP3.72□□□□□ -1.81
CD44-220ENST00000525688 RPL18AQ02543 176 aaKnown RBP3.72□□□□□ -1.81
CD44-220ENST00000525688 BCL2L1Q07817 233 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 ECH1Q13011 328 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 OR2F1Q13607 317 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 FAM53BQ14153 422 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 SIX1Q15475 284 aaPredicted RBP3.72□□□□□ -1.81
CD44-220ENST00000525688 SLC1A5Q15758 541 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 CYP51A1Q16850 503 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 MS4A13Q5J8X5 152 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 FHL5Q5TD97 284 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 PRSS41Q7RTY9 318 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 CBLN2Q8IUK8 224 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 SVOPLQ8N434 492 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 NATD1Q8N6N6 113 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 SAMD12Q8N8I0 201 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 ACOT4Q8N9L9 421 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 OR8G5Q8NG78 346 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 OR5AR1Q8NGP9 310 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 FNDC8Q8TC99 324 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 RCN3Q96D15 328 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 TCEAL4Q96EI5 215 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 OR10C1Q96KK4 312 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 ZNF597Q96LX8 424 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 COL21A1Q96P44 957 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 ZIM3Q96PE6 472 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 PSMB7Q99436 277 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 VAT1Q99536 393 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 GABRG3Q99928 467 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 RASL11BQ9BPW5 248 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 DHRS9Q9BPW9 319 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 MRPL45Q9BRJ2 306 aaKnown RBP3.72□□□□□ -1.81
CD44-220ENST00000525688 OSBPL11Q9BXB4 747 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 TPK1Q9H3S4 243 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 PRORYQ9H606 182 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 REEP1Q9H902 201 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 ADGRL4Q9HBW9 690 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 AMBNQ9NP70 447 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 DMAC2Q9NW81 257 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 SEC14L4Q9UDX3 406 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 CES1P1Q9UKY3 287 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 HHLA2Q9UM44 414 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 ALG5Q9Y673 324 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 TRIP11Q15643 1979 aa3.72□□□□□ -1.81
CD44-220ENST00000525688 CITO14578 2027 aa3.71□□□□□ -1.81
CD44-220ENST00000525688 PDCD11Q14690 1871 aaKnown RBP3.71□□□□□ -1.82
CD44-220ENST00000525688 VPS13AQ96RL7 3174 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 CENPVL3A0A0U1RRI6 287 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 FAM166BA8MTA8 275 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms