RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 NRCAMQ92823 1304 aa4.02□□□□□ -1.77
USP47-204ENST00000525078 ZNF532Q9HCE3 1301 aa4.02□□□□□ -1.77
USP47-204ENST00000525078 A0A1B0GXF2 115 aa4.02□□□□□ -1.77
USP47-204ENST00000525078 CLDN24A6NM45 220 aa4.02□□□□□ -1.77
USP47-204ENST00000525078 ALOX5APP20292 161 aa4.02□□□□□ -1.77
USP47-204ENST00000525078 M6PRP20645 277 aa4.02□□□□□ -1.77
USP47-204ENST00000525078 GABRR1P24046 479 aa4.02□□□□□ -1.77
USP47-204ENST00000525078 TAS2R43P59537 309 aa4.02□□□□□ -1.77
USP47-204ENST00000525078 SLC35A2P78381 396 aa4.02□□□□□ -1.77
USP47-204ENST00000525078 RPL19P84098 196 aaKnown RBP4.02□□□□□ -1.77
USP47-204ENST00000525078 OR2F1Q13607 317 aa4.02□□□□□ -1.77
USP47-204ENST00000525078 MOGQ16653 247 aa4.02□□□□□ -1.77
USP47-204ENST00000525078 HIST3H3Q16695 136 aa4.02□□□□□ -1.77
USP47-204ENST00000525078 LRRC75BQ2VPJ9 315 aa4.02□□□□□ -1.77
USP47-204ENST00000525078 ATP6AP1LQ52LC2 224 aa4.02□□□□□ -1.77
USP47-204ENST00000525078 HIST2H3PS2Q5TEC6 136 aa4.02□□□□□ -1.77
USP47-204ENST00000525078 TMED4Q7Z7H5 227 aa4.02□□□□□ -1.77
USP47-204ENST00000525078 MDP1Q86V88 176 aa4.02□□□□□ -1.77
USP47-204ENST00000525078 OR6V1Q8N148 313 aa4.02□□□□□ -1.77
USP47-204ENST00000525078 CLDN22Q8N7P3 220 aa4.02□□□□□ -1.77
USP47-204ENST00000525078 MFSD8Q8NHS3 518 aa4.02□□□□□ -1.77
USP47-204ENST00000525078 ASB17Q8WXJ9 295 aa4.02□□□□□ -1.77
USP47-204ENST00000525078 RDH5Q92781 318 aa4.02□□□□□ -1.77
USP47-204ENST00000525078 SNF8Q96H20 258 aa4.02□□□□□ -1.77
USP47-204ENST00000525078 TIMM17AQ99595 171 aa4.02□□□□□ -1.77
USP47-204ENST00000525078 HSD17B10Q99714 261 aaKnown RBP4.02□□□□□ -1.77
USP47-204ENST00000525078 TLNRD1Q9H1K6 362 aa4.02□□□□□ -1.77
USP47-204ENST00000525078 OR51I1Q9H343 314 aa4.02□□□□□ -1.77
USP47-204ENST00000525078 TRABDQ9H4I3 376 aa4.02□□□□□ -1.77
USP47-204ENST00000525078 POMKQ9H5K3 350 aa4.02□□□□□ -1.77
USP47-204ENST00000525078 VSIRQ9H7M9 311 aa4.02□□□□□ -1.77
USP47-204ENST00000525078 FBXO5Q9UKT4 447 aa4.02□□□□□ -1.77
USP47-204ENST00000525078 WDR62O43379 1518 aa4.01□□□□□ -1.77
USP47-204ENST00000525078 TMEM131Q92545 1883 aa4.01□□□□□ -1.77
USP47-204ENST00000525078 IGKV2D-30A0A075B6S6 120 aa4.01□□□□□ -1.77
USP47-204ENST00000525078 SMIM9A6NGZ8 99 aa4.01□□□□□ -1.77
USP47-204ENST00000525078 FAM183AA6NL82 134 aa4.01□□□□□ -1.77
USP47-204ENST00000525078 H7C423 109 aa4.01□□□□□ -1.77
USP47-204ENST00000525078 M0R1X1 148 aa4.01□□□□□ -1.77
USP47-204ENST00000525078 PDCD6O75340 191 aa4.01□□□□□ -1.77
USP47-204ENST00000525078 ARL6IP5O75915 188 aa4.01□□□□□ -1.77
USP47-204ENST00000525078 SUPT7LO94864 414 aa4.01□□□□□ -1.77
USP47-204ENST00000525078 IGHV3-13P01766 116 aa4.01□□□□□ -1.77
USP47-204ENST00000525078 LINC00614P0C842 121 aa4.01□□□□□ -1.77
USP47-204ENST00000525078 SSTR5P35346 364 aa4.01□□□□□ -1.77
USP47-204ENST00000525078 SKP2Q13309 424 aa4.01□□□□□ -1.77
USP47-204ENST00000525078 C1DQ13901 141 aaKnown RBP4.01□□□□□ -1.77
USP47-204ENST00000525078 PTGES3Q15185 160 aaKnown RBP4.01□□□□□ -1.77
USP47-204ENST00000525078 RSU1Q15404 277 aa4.01□□□□□ -1.77
USP47-204ENST00000525078 FAM162BQ5T6X4 162 aa4.01□□□□□ -1.77
USP47-204ENST00000525078 TAC4Q86UU9 113 aa4.01□□□□□ -1.77
USP47-204ENST00000525078 ITPRIPQ8IWB1 547 aa4.01□□□□□ -1.77
USP47-204ENST00000525078 WDSUB1Q8N9V3 476 aa4.01□□□□□ -1.77
USP47-204ENST00000525078 OR6K3Q8NGY3 331 aa4.01□□□□□ -1.77
USP47-204ENST00000525078 GHSRQ92847 366 aa4.01□□□□□ -1.77
USP47-204ENST00000525078 PAXXQ9BUH6 204 aa4.01□□□□□ -1.77
USP47-204ENST00000525078 CHST5Q9GZS9 411 aa4.01□□□□□ -1.77
USP47-204ENST00000525078 LINC00597Q9H2U6 94 aa4.01□□□□□ -1.77
USP47-204ENST00000525078 DKKL1Q9UK85 242 aa4.01□□□□□ -1.77
USP47-204ENST00000525078 C14orf166Q9Y224 244 aaKnown RBP4.01□□□□□ -1.77
USP47-204ENST00000525078 POLR1DQ9Y2S0 133 aa4.01□□□□□ -1.77
USP47-204ENST00000525078 A0A1W2PP64 1363 aa4.01□□□□□ -1.77
USP47-204ENST00000525078 ROCK1Q13464 1354 aa4.01□□□□□ -1.77
USP47-204ENST00000525078 A0A0U1RQV1 116 aa4□□□□□ -1.77
USP47-204ENST00000525078 NDUFAF8A1L188 74 aa4□□□□□ -1.77
USP47-204ENST00000525078 ZNF705GA8MUZ8 300 aaPredicted RBP4□□□□□ -1.77
USP47-204ENST00000525078 NDUFC2-KCTD14E9PQ53 114 aa4□□□□□ -1.77
USP47-204ENST00000525078 CCDC22O60826 627 aa4□□□□□ -1.77
USP47-204ENST00000525078 SUPT3HO75486 399 aa4□□□□□ -1.77
USP47-204ENST00000525078 CA11O75493 328 aa4□□□□□ -1.77
USP47-204ENST00000525078 MMP23AO75900 390 aa4□□□□□ -1.77
USP47-204ENST00000525078 CFC1BP0CG36 223 aa4□□□□□ -1.77
USP47-204ENST00000525078 CFC1P0CG37 223 aa4□□□□□ -1.77
USP47-204ENST00000525078 GABRA1P14867 456 aa4□□□□□ -1.77
USP47-204ENST00000525078 AGTR1P30556 359 aa4□□□□□ -1.77
USP47-204ENST00000525078 PRSS3P35030 304 aa4□□□□□ -1.77
USP47-204ENST00000525078 POLR2IP36954 125 aaKnown RBP4□□□□□ -1.77
USP47-204ENST00000525078 RBMXP38159 391 aaKnown RBP4□□□□□ -1.77
USP47-204ENST00000525078 SPCS3P61009 180 aa4□□□□□ -1.77
USP47-204ENST00000525078 CRADDP78560 199 aa4□□□□□ -1.77
USP47-204ENST00000525078 GTF2BQ00403 316 aa4□□□□□ -1.77
USP47-204ENST00000525078 KRR1Q13601 381 aaKnown RBP4□□□□□ -1.77
USP47-204ENST00000525078 C16orf72Q14CZ0 275 aa4□□□□□ -1.77
USP47-204ENST00000525078 TSPO2Q5TGU0 170 aa4□□□□□ -1.77
USP47-204ENST00000525078 RSBN1Q5VWQ0 802 aaPredicted RBP4□□□□□ -1.77
USP47-204ENST00000525078 TRIQKQ629K1 86 aa4□□□□□ -1.77
USP47-204ENST00000525078 OR10K2Q6IF99 312 aa4□□□□□ -1.77
USP47-204ENST00000525078 MUC15Q8N387 334 aa4□□□□□ -1.77
USP47-204ENST00000525078 KLHL30-AS1Q8NEE0 82 aa4□□□□□ -1.77
USP47-204ENST00000525078 OR10X1Q8NGY0 326 aa4□□□□□ -1.77
USP47-204ENST00000525078 SRSF12Q8WXF0 261 aaKnown RBP4□□□□□ -1.77
USP47-204ENST00000525078 CCL17Q92583 94 aa4□□□□□ -1.77
USP47-204ENST00000525078 MRPL48Q96GC5 212 aaKnown RBP4□□□□□ -1.77
USP47-204ENST00000525078 GLS2Q9UI32 602 aa4□□□□□ -1.77
USP47-204ENST00000525078 PROCRQ9UNN8 238 aa4□□□□□ -1.77
USP47-204ENST00000525078 INSIG2Q9Y5U4 225 aa4□□□□□ -1.77
USP47-204ENST00000525078 POGZQ7Z3K3 1410 aa4□□□□□ -1.77
USP47-204ENST00000525078 EIF3AQ14152 1382 aaKnown RBP4□□□□□ -1.77
USP47-204ENST00000525078 IGKV1-27A0A075B6S5 117 aa3.99□□□□□ -1.77
USP47-204ENST00000525078 IGHV3-74A0A0B4J1X5 117 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms