RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 ZP1P60852 638 aa17.14■□□□□ 0.33
TRAPPC9-215ENST00000524162 BDH1Q02338 343 aa17.14■□□□□ 0.33
TRAPPC9-215ENST00000524162 COL10A1Q03692 680 aa17.14■□□□□ 0.33
TRAPPC9-215ENST00000524162 ACSM1Q08AH1 577 aa17.14■□□□□ 0.33
TRAPPC9-215ENST00000524162 RIPK1Q13546 671 aa17.14■□□□□ 0.33
TRAPPC9-215ENST00000524162 Q6YL49 198 aa17.14■□□□□ 0.33
TRAPPC9-215ENST00000524162 STX19Q8N4C7 294 aa17.14■□□□□ 0.33
TRAPPC9-215ENST00000524162 PXT1Q8NFP0 134 aa17.14■□□□□ 0.33
TRAPPC9-215ENST00000524162 TMEM106AQ96A25 262 aa17.14■□□□□ 0.33
TRAPPC9-215ENST00000524162 SIRT4Q9Y6E7 314 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC9-215ENST00000524162 TRBV5-5A0A0J9YX44 114 aa17.13■□□□□ 0.33
TRAPPC9-215ENST00000524162 ERICH4A6NGS2 130 aa17.13■□□□□ 0.33
TRAPPC9-215ENST00000524162 MAGEB3O15480 346 aa17.13■□□□□ 0.33
TRAPPC9-215ENST00000524162 HAND1O96004 215 aa17.13■□□□□ 0.33
TRAPPC9-215ENST00000524162 BCL3P20749 454 aa17.13■□□□□ 0.33
TRAPPC9-215ENST00000524162 EEF1B2P24534 225 aaKnown RBP17.13■□□□□ 0.33
TRAPPC9-215ENST00000524162 LMO1P25800 156 aa17.13■□□□□ 0.33
TRAPPC9-215ENST00000524162 NPBWR2P48146 333 aa17.13■□□□□ 0.33
TRAPPC9-215ENST00000524162 HSPA13P48723 471 aa17.13■□□□□ 0.33
TRAPPC9-215ENST00000524162 AQP4P55087 323 aa17.13■□□□□ 0.33
TRAPPC9-215ENST00000524162 WNT4P56705 351 aa17.13■□□□□ 0.33
TRAPPC9-215ENST00000524162 MEF2CQ06413 473 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC9-215ENST00000524162 SLC9A3R2Q15599 337 aa17.13■□□□□ 0.33
TRAPPC9-215ENST00000524162 DEFB112Q30KQ8 113 aa17.13■□□□□ 0.33
TRAPPC9-215ENST00000524162 C6orf141Q5SZD1 244 aa17.13■□□□□ 0.33
TRAPPC9-215ENST00000524162 TMEM200BQ69YZ2 307 aa17.13■□□□□ 0.33
TRAPPC9-215ENST00000524162 ELP2Q6IA86 826 aa17.13■□□□□ 0.33
TRAPPC9-215ENST00000524162 AHSA2Q719I0 299 aa17.13■□□□□ 0.33
TRAPPC9-215ENST00000524162 LDLRAD3Q86YD5 345 aa17.13■□□□□ 0.33
TRAPPC9-215ENST00000524162 NANOGP1Q8N7R0 232 aa17.13■□□□□ 0.33
TRAPPC9-215ENST00000524162 Q8NFD4 153 aa17.13■□□□□ 0.33
TRAPPC9-215ENST00000524162 BPIFB6Q8NFQ5 453 aa17.13■□□□□ 0.33
TRAPPC9-215ENST00000524162 THRSPQ92748 146 aa17.13■□□□□ 0.33
TRAPPC9-215ENST00000524162 GHSRQ92847 366 aa17.13■□□□□ 0.33
TRAPPC9-215ENST00000524162 ANKRD60Q9BZ19 345 aa17.13■□□□□ 0.33
TRAPPC9-215ENST00000524162 C19orf12Q9NSK7 152 aa17.13■□□□□ 0.33
TRAPPC9-215ENST00000524162 RBFOX1Q9NWB1 397 aaKnown RBP17.13■□□□□ 0.33
TRAPPC9-215ENST00000524162 ERGIC3Q9Y282 383 aa17.13■□□□□ 0.33
TRAPPC9-215ENST00000524162 PCDHGB5Q9Y5G0 923 aa17.13■□□□□ 0.33
TRAPPC9-215ENST00000524162 KIAA2026Q5HYC2 2103 aa17.12■□□□□ 0.33
TRAPPC9-215ENST00000524162 IGKV1-12A0A0C4DH73 117 aa17.12■□□□□ 0.33
TRAPPC9-215ENST00000524162 RNASEK-C17orf49H0YIS7 233 aa17.12■□□□□ 0.33
TRAPPC9-215ENST00000524162 MYL12BO14950 172 aa17.12■□□□□ 0.33
TRAPPC9-215ENST00000524162 IGKV1D-12P01611 117 aa17.12■□□□□ 0.33
TRAPPC9-215ENST00000524162 HCKP08631 526 aa17.12■□□□□ 0.33
TRAPPC9-215ENST00000524162 MYF6P23409 242 aa17.12■□□□□ 0.33
TRAPPC9-215ENST00000524162 ERP29P30040 261 aaKnown RBP17.12■□□□□ 0.33
TRAPPC9-215ENST00000524162 C21orf33P30042 268 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC9-215ENST00000524162 CEBPDP49716 269 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC9-215ENST00000524162 RPL15P61313 204 aaKnown RBP17.12■□□□□ 0.33
TRAPPC9-215ENST00000524162 ASPHD2Q6ICH7 369 aa17.12■□□□□ 0.33
TRAPPC9-215ENST00000524162 ASCC1Q8N9N2 400 aaKnown RBP17.12■□□□□ 0.33
TRAPPC9-215ENST00000524162 PPP1R35Q8TAP8 253 aa17.12■□□□□ 0.33
TRAPPC9-215ENST00000524162 PGLYRP3Q96LB9 341 aa17.12■□□□□ 0.33
TRAPPC9-215ENST00000524162 CDCA4Q9BXL8 241 aa17.12■□□□□ 0.33
TRAPPC9-215ENST00000524162 ELL3Q9HB65 397 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC9-215ENST00000524162 TMEM138Q9NPI0 162 aa17.12■□□□□ 0.33
TRAPPC9-215ENST00000524162 SCN3BQ9NY72 215 aa17.12■□□□□ 0.33
TRAPPC9-215ENST00000524162 SH2D1BO14796 132 aa17.11■□□□□ 0.33
TRAPPC9-215ENST00000524162 SPRY1O43609 319 aaPredicted RBP17.11■□□□□ 0.33
TRAPPC9-215ENST00000524162 CDK1P06493 297 aa17.11■□□□□ 0.33
TRAPPC9-215ENST00000524162 ACTG1P63261 375 aa17.11■□□□□ 0.33
TRAPPC9-215ENST00000524162 Q499Y3 187 aa17.11■□□□□ 0.33
TRAPPC9-215ENST00000524162 RUSC1-AS1Q66K80 236 aa17.11■□□□□ 0.33
TRAPPC9-215ENST00000524162 ASCL4Q6XD76 172 aa17.11■□□□□ 0.33
TRAPPC9-215ENST00000524162 C17orf107Q6ZR85 190 aa17.11■□□□□ 0.33
TRAPPC9-215ENST00000524162 GDPD3Q7L5L3 318 aa17.11■□□□□ 0.33
TRAPPC9-215ENST00000524162 FAM185AQ8N0U4 392 aa17.11■□□□□ 0.33
TRAPPC9-215ENST00000524162 PIP4P2Q8N4L2 257 aa17.11■□□□□ 0.33
TRAPPC9-215ENST00000524162 C11orf42Q8N5U0 333 aa17.11■□□□□ 0.33
TRAPPC9-215ENST00000524162 CHST4Q8NCG5 386 aa17.11■□□□□ 0.33
TRAPPC9-215ENST00000524162 SSMEM1Q8WWF3 244 aa17.11■□□□□ 0.33
TRAPPC9-215ENST00000524162 MYDGFQ969H8 173 aa17.11■□□□□ 0.33
TRAPPC9-215ENST00000524162 ZDHHC16Q969W1 377 aa17.11■□□□□ 0.33
TRAPPC9-215ENST00000524162 SIRT7Q9NRC8 400 aa17.11■□□□□ 0.33
TRAPPC9-215ENST00000524162 SF3B6Q9Y3B4 125 aaKnown RBP17.11■□□□□ 0.33
TRAPPC9-215ENST00000524162 TMEM82A0PJX8 343 aa17.1■□□□□ 0.33
TRAPPC9-215ENST00000524162 C17orf98A8MV24 154 aa17.1■□□□□ 0.33
TRAPPC9-215ENST00000524162 H0YHG0 523 aa17.1■□□□□ 0.33
TRAPPC9-215ENST00000524162 MGST3O14880 152 aa17.1■□□□□ 0.33
TRAPPC9-215ENST00000524162 HKR1P10072 659 aa17.1■□□□□ 0.33
TRAPPC9-215ENST00000524162 PRKACAP17612 351 aa17.1■□□□□ 0.33
TRAPPC9-215ENST00000524162 FSTP19883 344 aa17.1■□□□□ 0.33
TRAPPC9-215ENST00000524162 MTNR1BP49286 362 aa17.1■□□□□ 0.33
TRAPPC9-215ENST00000524162 RPS11P62280 158 aaKnown RBP eCLIP17.1■□□□□ 0.33
TRAPPC9-215ENST00000524162 PPP3R1P63098 170 aa17.1■□□□□ 0.33
TRAPPC9-215ENST00000524162 MIDNQ504T8 468 aa17.1■□□□□ 0.33
TRAPPC9-215ENST00000524162 GCDHQ92947 438 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC9-215ENST00000524162 SPACA5Q96QH8 159 aa17.1■□□□□ 0.33
TRAPPC9-215ENST00000524162 HEXA-AS1Q9H8Q6 139 aa17.1■□□□□ 0.33
TRAPPC9-215ENST00000524162 NPFFO15130 113 aa17.09■□□□□ 0.33
TRAPPC9-215ENST00000524162 ANGPTL7O43827 346 aa17.09■□□□□ 0.33
TRAPPC9-215ENST00000524162 CSN2P05814 226 aa17.09■□□□□ 0.33
TRAPPC9-215ENST00000524162 MELTFP08582 738 aa17.09■□□□□ 0.33
TRAPPC9-215ENST00000524162 FBP1P09467 338 aa17.09■□□□□ 0.33
TRAPPC9-215ENST00000524162 TMEM225BP0DP42 221 aa17.09■□□□□ 0.33
TRAPPC9-215ENST00000524162 IGFBP3P17936 291 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC9-215ENST00000524162 SOX2P48431 317 aa17.09■□□□□ 0.33
TRAPPC9-215ENST00000524162 DLX6P56179 175 aa17.09■□□□□ 0.33
TRAPPC9-215ENST00000524162 SLC35A2P78381 396 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms