RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 DEDDO75618 318 aa1.86□□□□□ -2.11
PCM1-219ENST00000523540 SNAI1O95863 264 aaPredicted RBP1.86□□□□□ -2.11
PCM1-219ENST00000523540 IGHV3-53P01767 116 aa1.86□□□□□ -2.11
PCM1-219ENST00000523540 IMPA1P29218 277 aa1.86□□□□□ -2.11
PCM1-219ENST00000523540 SSX1Q16384 188 aa1.86□□□□□ -2.11
PCM1-219ENST00000523540 ZNF404Q494X3 552 aa1.86□□□□□ -2.11
PCM1-219ENST00000523540 SYT6Q5T7P8 510 aaPredicted RBP1.86□□□□□ -2.11
PCM1-219ENST00000523540 EIF4E3Q8N5X7 224 aaKnown RBP1.86□□□□□ -2.11
PCM1-219ENST00000523540 OR2K2Q8NGT1 345 aa1.86□□□□□ -2.11
PCM1-219ENST00000523540 ZNF75CPQ92670 426 aaPredicted RBP1.86□□□□□ -2.11
PCM1-219ENST00000523540 SHCBP1LQ9BZQ2 653 aa1.86□□□□□ -2.11
PCM1-219ENST00000523540 TSGA10Q9BZW7 698 aa1.86□□□□□ -2.11
PCM1-219ENST00000523540 IFNKQ9P0W0 207 aa1.86□□□□□ -2.11
PCM1-219ENST00000523540 RAB23Q9ULC3 237 aa1.86□□□□□ -2.11
PCM1-219ENST00000523540 ACOT9Q9Y305 439 aa1.86□□□□□ -2.11
PCM1-219ENST00000523540 ITGB4P16144 1822 aa1.86□□□□□ -2.11
PCM1-219ENST00000523540 LOC389332A0A1B0GUA5 103 aa1.85□□□□□ -2.11
PCM1-219ENST00000523540 ZNF729A6NN14 1252 aaPredicted RBP1.85□□□□□ -2.11
PCM1-219ENST00000523540 OR2AT4A6NND4 320 aa1.85□□□□□ -2.11
PCM1-219ENST00000523540 SYNGR2O43760 224 aa1.85□□□□□ -2.11
PCM1-219ENST00000523540 NEFHP12036 1026 aa1.85□□□□□ -2.11
PCM1-219ENST00000523540 DYNC1I2Q13409 638 aaKnown RBP1.85□□□□□ -2.11
PCM1-219ENST00000523540 NELFCDQ8IXH7 590 aa1.85□□□□□ -2.11
PCM1-219ENST00000523540 CPNE9Q8IYJ1 553 aa1.85□□□□□ -2.11
PCM1-219ENST00000523540 ZFP82Q8N141 532 aa1.85□□□□□ -2.11
PCM1-219ENST00000523540 CA13Q8N1Q1 262 aa1.85□□□□□ -2.11
PCM1-219ENST00000523540 ARHGAP18Q8N392 663 aa1.85□□□□□ -2.11
PCM1-219ENST00000523540 C3orf22Q8N5N4 141 aa1.85□□□□□ -2.11
PCM1-219ENST00000523540 QKIQ96PU8 341 aaKnown RBP eCLIP1.85□□□□□ -2.11
PCM1-219ENST00000523540 SLC38A1Q9H2H9 487 aa1.85□□□□□ -2.11
PCM1-219ENST00000523540 TDRD3Q9H7E2 651 aaKnown RBP1.85□□□□□ -2.11
PCM1-219ENST00000523540 C12orf4Q9NQ89 552 aa1.85□□□□□ -2.11
PCM1-219ENST00000523540 ZNHIT6Q9NWK9 470 aaKnown RBP1.85□□□□□ -2.11
PCM1-219ENST00000523540 CFAP45Q9UL16 551 aa1.85□□□□□ -2.11
PCM1-219ENST00000523540 ZNF443Q9Y2A4 671 aaPredicted RBP1.85□□□□□ -2.11
PCM1-219ENST00000523540 AP3M1Q9Y2T2 418 aa1.85□□□□□ -2.11
PCM1-219ENST00000523540 ZNF706Q9Y5V0 76 aaPredicted RBP1.85□□□□□ -2.11
PCM1-219ENST00000523540 ZNF780BQ9Y6R6 833 aa1.85□□□□□ -2.11
PCM1-219ENST00000523540 AQRO60306 1485 aaKnown RBP eCLIP1.85□□□□□ -2.11
PCM1-219ENST00000523540 NOS1P29475 1434 aa1.84□□□□□ -2.11
PCM1-219ENST00000523540 KIF27Q86VH2 1401 aa1.84□□□□□ -2.11
PCM1-219ENST00000523540 ZCCHC6Q5VYS8 1495 aaKnown RBP1.84□□□□□ -2.11
PCM1-219ENST00000523540 IGHV3-21A0A0B4J1V1 117 aa1.84□□□□□ -2.11
PCM1-219ENST00000523540 IGHV3-43A0A0B4J1X8 118 aa1.84□□□□□ -2.11
PCM1-219ENST00000523540 LINC00854A0A1B0GVQ3 168 aa1.84□□□□□ -2.11
PCM1-219ENST00000523540 SDHAF1A6NFY7 115 aa1.84□□□□□ -2.11
PCM1-219ENST00000523540 SEC14L6B5MCN3 397 aa1.84□□□□□ -2.11
PCM1-219ENST00000523540 RGS5O15539 181 aa1.84□□□□□ -2.11
PCM1-219ENST00000523540 SLC37A4O43826 429 aa1.84□□□□□ -2.11
PCM1-219ENST00000523540 E2F6O75461 281 aa1.84□□□□□ -2.11
PCM1-219ENST00000523540 IGKV1D-33P01593 117 aa1.84□□□□□ -2.11
PCM1-219ENST00000523540 IGKV1-33P01594 117 aa1.84□□□□□ -2.11
PCM1-219ENST00000523540 MBP02144 154 aa1.84□□□□□ -2.11
PCM1-219ENST00000523540 LIPCP11150 499 aa1.84□□□□□ -2.11
PCM1-219ENST00000523540 GZMAP12544 262 aa1.84□□□□□ -2.11
PCM1-219ENST00000523540 ZNF708P17019 499 aa1.84□□□□□ -2.11
PCM1-219ENST00000523540 HOXB8P17481 243 aaPredicted RBP1.84□□□□□ -2.11
PCM1-219ENST00000523540 TAC1P20366 129 aa1.84□□□□□ -2.11
PCM1-219ENST00000523540 TAL2Q16559 108 aa1.84□□□□□ -2.11
PCM1-219ENST00000523540 NDUFAF6Q330K2 333 aa1.84□□□□□ -2.11
PCM1-219ENST00000523540 ATP6AP1LQ52LC2 224 aa1.84□□□□□ -2.11
PCM1-219ENST00000523540 CLEC12AQ5QGZ9 265 aa1.84□□□□□ -2.11
PCM1-219ENST00000523540 IDNKQ5T6J7 187 aa1.84□□□□□ -2.11
PCM1-219ENST00000523540 Q6ZQT7 251 aa1.84□□□□□ -2.11
PCM1-219ENST00000523540 TCF24Q7RTU0 167 aa1.84□□□□□ -2.11
PCM1-219ENST00000523540 LINC00596Q86U02 117 aa1.84□□□□□ -2.11
PCM1-219ENST00000523540 FAM184AQ8NB25 1140 aa1.84□□□□□ -2.11
PCM1-219ENST00000523540 PHOSPHO2Q8TCD6 241 aa1.84□□□□□ -2.11
PCM1-219ENST00000523540 OR2M4Q96R27 311 aa1.84□□□□□ -2.11
PCM1-219ENST00000523540 CCDC94Q9BW85 323 aaPredicted RBP1.84□□□□□ -2.11
PCM1-219ENST00000523540 KRTAP4-1Q9BYQ7 146 aa1.84□□□□□ -2.11
PCM1-219ENST00000523540 TXNIPQ9H3M7 391 aa1.84□□□□□ -2.11
PCM1-219ENST00000523540 ANXA10Q9UJ72 324 aa1.84□□□□□ -2.11
PCM1-219ENST00000523540 FLVCR2Q9UPI3 526 aa1.84□□□□□ -2.11
PCM1-219ENST00000523540 TMEM94Q12767 1356 aa1.84□□□□□ -2.12
PCM1-219ENST00000523540 TRAV8-7A0A075B6U6 113 aa1.83□□□□□ -2.12
PCM1-219ENST00000523540 SLC5A10A0PJK1 596 aa1.83□□□□□ -2.12
PCM1-219ENST00000523540 A8MWP4 228 aa1.83□□□□□ -2.12
PCM1-219ENST00000523540 ZNF593O00488 134 aaPredicted RBP1.83□□□□□ -2.12
PCM1-219ENST00000523540 TCAPO15273 167 aa1.83□□□□□ -2.12
PCM1-219ENST00000523540 COX7A2P2O60397 106 aa1.83□□□□□ -2.12
PCM1-219ENST00000523540 NEMFO60524 1076 aa1.83□□□□□ -2.12
PCM1-219ENST00000523540 RLN2P04090 185 aa1.83□□□□□ -2.12
PCM1-219ENST00000523540 CRYGCP07315 174 aa1.83□□□□□ -2.12
PCM1-219ENST00000523540 DRAXINQ8NBI3 349 aaPredicted RBP1.83□□□□□ -2.12
PCM1-219ENST00000523540 FAM131CQ96AQ9 280 aa1.83□□□□□ -2.12
PCM1-219ENST00000523540 STACQ99469 402 aa1.83□□□□□ -2.12
PCM1-219ENST00000523540 BRD4O60885 1362 aaPredicted RBP1.83□□□□□ -2.12
PCM1-219ENST00000523540 A0A0B4J2C4 111 aa1.82□□□□□ -2.12
PCM1-219ENST00000523540 A0A1W2PNM2 257 aa1.82□□□□□ -2.12
PCM1-219ENST00000523540 TVP23AA6NH52 213 aa1.82□□□□□ -2.12
PCM1-219ENST00000523540 K7EN84 100 aa1.82□□□□□ -2.12
PCM1-219ENST00000523540 K7ERS5 55 aa1.82□□□□□ -2.12
PCM1-219ENST00000523540 M0QX08 132 aa1.82□□□□□ -2.12
PCM1-219ENST00000523540 GYG2O15488 501 aa1.82□□□□□ -2.12
PCM1-219ENST00000523540 KDELR3O43731 214 aa1.82□□□□□ -2.12
PCM1-219ENST00000523540 CGB3P0DN86 165 aa1.82□□□□□ -2.12
PCM1-219ENST00000523540 CGB7P0DN87 165 aa1.82□□□□□ -2.12
PCM1-219ENST00000523540 GPR4P46093 362 aa1.82□□□□□ -2.12
PCM1-219ENST00000523540 DHRS2Q13268 280 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms