RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 BCAS4Q8TDM0 211 aa12.38□□□□□ -0.43
MRPS28-209ENST00000522987 WIPF2Q8TF74 440 aaPredicted RBP12.38□□□□□ -0.43
MRPS28-209ENST00000522987 BORCS8Q96FH0 119 aa12.38□□□□□ -0.43
MRPS28-209ENST00000522987 SNX22Q96L94 193 aa12.38□□□□□ -0.43
MRPS28-209ENST00000522987 ADI1Q9BV57 179 aa12.38□□□□□ -0.43
MRPS28-209ENST00000522987 PRRG3Q9BZD7 231 aa12.38□□□□□ -0.43
MRPS28-209ENST00000522987 WNT10AQ9GZT5 417 aa12.38□□□□□ -0.43
MRPS28-209ENST00000522987 NECAP2Q9NVZ3 263 aa12.38□□□□□ -0.43
MRPS28-209ENST00000522987 hADV38S2A0JD32 116 aa12.37□□□□□ -0.43
MRPS28-209ENST00000522987 ZAR1LA6NP61 321 aa12.37□□□□□ -0.43
MRPS28-209ENST00000522987 PSPNO60542 156 aa12.37□□□□□ -0.43
MRPS28-209ENST00000522987 PRKACAP17612 351 aa12.37□□□□□ -0.43
MRPS28-209ENST00000522987 CCL1P22362 96 aa12.37□□□□□ -0.43
MRPS28-209ENST00000522987 POLR2IP36954 125 aaKnown RBP12.37□□□□□ -0.43
MRPS28-209ENST00000522987 TP53I3Q53FA7 332 aa12.37□□□□□ -0.43
MRPS28-209ENST00000522987 KHDC1LQ5JSQ8 128 aa12.37□□□□□ -0.43
MRPS28-209ENST00000522987 C10orf99Q6UWK7 81 aa12.37□□□□□ -0.43
MRPS28-209ENST00000522987 RNF144BQ7Z419 303 aa12.37□□□□□ -0.43
MRPS28-209ENST00000522987 AMIGO2Q86SJ2 522 aa12.37□□□□□ -0.43
MRPS28-209ENST00000522987 PRSS35Q8N3Z0 413 aa12.37□□□□□ -0.43
MRPS28-209ENST00000522987 DNAJC9Q8WXX5 260 aa12.37□□□□□ -0.43
MRPS28-209ENST00000522987 ITFG2Q969R8 447 aa12.37□□□□□ -0.43
MRPS28-209ENST00000522987 UTP4Q969X6 686 aaKnown RBP12.37□□□□□ -0.43
MRPS28-209ENST00000522987 TMEM133Q9H2Q1 129 aa12.37□□□□□ -0.43
MRPS28-209ENST00000522987 SESN1Q9Y6P5 492 aa12.37□□□□□ -0.43
MRPS28-209ENST00000522987 LOC107986453A0A1B0GWG9 222 aa12.36□□□□□ -0.43
MRPS28-209ENST00000522987 METTL15A6NJ78 407 aa12.36□□□□□ -0.43
MRPS28-209ENST00000522987 PF4V1P10720 104 aa12.36□□□□□ -0.43
MRPS28-209ENST00000522987 PEX2P28328 305 aa12.36□□□□□ -0.43
MRPS28-209ENST00000522987 GDNFP39905 211 aa12.36□□□□□ -0.43
MRPS28-209ENST00000522987 KIR3DL2P43630 455 aa12.36□□□□□ -0.43
MRPS28-209ENST00000522987 FUT6P51993 359 aa12.36□□□□□ -0.43
MRPS28-209ENST00000522987 EFNB1P98172 346 aa12.36□□□□□ -0.43
MRPS28-209ENST00000522987 ZNF91Q05481 1191 aa12.36□□□□□ -0.43
MRPS28-209ENST00000522987 DNAL1Q4LDG9 190 aa12.36□□□□□ -0.43
MRPS28-209ENST00000522987 Q6ZSR3 168 aa12.36□□□□□ -0.43
MRPS28-209ENST00000522987 GID4Q8IVV7 300 aa12.36□□□□□ -0.43
MRPS28-209ENST00000522987 DTX3Q8N9I9 347 aa12.36□□□□□ -0.43
MRPS28-209ENST00000522987 SLC7A6OSQ96CW6 309 aaPredicted RBP12.36□□□□□ -0.43
MRPS28-209ENST00000522987 ADAT3Q96EY9 351 aaPredicted RBP12.36□□□□□ -0.43
MRPS28-209ENST00000522987 NRBF2Q96F24 287 aa12.36□□□□□ -0.43
MRPS28-209ENST00000522987 SPACA5Q96QH8 159 aa12.36□□□□□ -0.43
MRPS28-209ENST00000522987 MNTQ99583 582 aa12.36□□□□□ -0.43
MRPS28-209ENST00000522987 OCSTAMPQ9BR26 566 aa12.36□□□□□ -0.43
MRPS28-209ENST00000522987 CLEC7AQ9BXN2 247 aa12.36□□□□□ -0.43
MRPS28-209ENST00000522987 GNG8Q9UK08 70 aa12.36□□□□□ -0.43
MRPS28-209ENST00000522987 DNAH3Q8TD57 4116 aa12.35□□□□□ -0.43
MRPS28-209ENST00000522987 DHRS7CA6NNS2 312 aa12.35□□□□□ -0.43
MRPS28-209ENST00000522987 G3V2T6 193 aa12.35□□□□□ -0.43
MRPS28-209ENST00000522987 GATBO75879 557 aaKnown RBP12.35□□□□□ -0.43
MRPS28-209ENST00000522987 DNAJC8O75937 253 aaPredicted RBP12.35□□□□□ -0.43
MRPS28-209ENST00000522987 RBP4P02753 201 aa12.35□□□□□ -0.43
MRPS28-209ENST00000522987 LPLP06858 475 aa12.35□□□□□ -0.43
MRPS28-209ENST00000522987 HTR1DP28221 377 aa12.35□□□□□ -0.43
MRPS28-209ENST00000522987 OR3A1P47881 315 aa12.35□□□□□ -0.43
MRPS28-209ENST00000522987 MEF2CQ06413 473 aaPredicted RBP12.35□□□□□ -0.43
MRPS28-209ENST00000522987 SCN1BQ07699 218 aa12.35□□□□□ -0.43
MRPS28-209ENST00000522987 ABCA11PQ4W5N1 156 aa12.35□□□□□ -0.43
MRPS28-209ENST00000522987 C9orf152Q5JTZ5 239 aa12.35□□□□□ -0.43
MRPS28-209ENST00000522987 CENPVQ7Z7K6 275 aaPredicted RBP12.35□□□□□ -0.43
MRPS28-209ENST00000522987 FAM58AQ8N1B3 248 aa12.35□□□□□ -0.43
MRPS28-209ENST00000522987 OR5D18Q8NGL1 313 aa12.35□□□□□ -0.43
MRPS28-209ENST00000522987 OR4P4Q8NGL7 312 aa12.35□□□□□ -0.43
MRPS28-209ENST00000522987 CHST5Q9GZS9 411 aa12.35□□□□□ -0.43
MRPS28-209ENST00000522987 GSTK1Q9Y2Q3 226 aa12.35□□□□□ -0.43
MRPS28-209ENST00000522987 LINC00312Q9Y6C7 94 aa12.35□□□□□ -0.43
MRPS28-209ENST00000522987 IGKV1-9A0A0C4DH69 117 aa12.34□□□□□ -0.43
MRPS28-209ENST00000522987 TCRBV4S1A1TA0A5B7 111 aa12.34□□□□□ -0.43
MRPS28-209ENST00000522987 ENTPD6O75354 484 aa12.34□□□□□ -0.43
MRPS28-209ENST00000522987 PF4P02776 101 aa12.34□□□□□ -0.43
MRPS28-209ENST00000522987 ATP6V1E1P36543 226 aa12.34□□□□□ -0.43
MRPS28-209ENST00000522987 ATP1B3P54709 279 aa12.34□□□□□ -0.43
MRPS28-209ENST00000522987 TCTEX1D4Q5JR98 221 aa12.34□□□□□ -0.43
MRPS28-209ENST00000522987 UTF1Q5T230 341 aa12.34□□□□□ -0.43
MRPS28-209ENST00000522987 MINOS1Q5TGZ0 78 aa12.34□□□□□ -0.43
MRPS28-209ENST00000522987 ABHD12Q8N2K0 398 aa12.34□□□□□ -0.43
MRPS28-209ENST00000522987 FGGYQ96C11 551 aa12.34□□□□□ -0.43
MRPS28-209ENST00000522987 CIB1Q99828 191 aa12.34□□□□□ -0.43
MRPS28-209ENST00000522987 SLC25A33Q9BSK2 321 aa12.34□□□□□ -0.43
MRPS28-209ENST00000522987 RIBC2Q9H4K1 309 aa12.34□□□□□ -0.43
MRPS28-209ENST00000522987 WARS2Q9UGM6 360 aaKnown RBP12.34□□□□□ -0.43
MRPS28-209ENST00000522987 MINOS1-NBL1R4GNA1 71 aa12.34□□□□□ -0.43
MRPS28-209ENST00000522987 K7EIL1 84 aa12.33□□□□□ -0.44
MRPS28-209ENST00000522987 SERPINA3P01011 423 aa12.33□□□□□ -0.44
MRPS28-209ENST00000522987 OR2T7P0C7T2 308 aa12.33□□□□□ -0.44
MRPS28-209ENST00000522987 HOXB6P17509 224 aaKnown RBP12.33□□□□□ -0.44
MRPS28-209ENST00000522987 CDK2P24941 298 aa12.33□□□□□ -0.44
MRPS28-209ENST00000522987 AZGP1P25311 298 aaKnown RBP12.33□□□□□ -0.44
MRPS28-209ENST00000522987 HTR1FP30939 366 aa12.33□□□□□ -0.44
MRPS28-209ENST00000522987 GLIPR1P48060 266 aa12.33□□□□□ -0.44
MRPS28-209ENST00000522987 DYNLT3P51808 116 aa12.33□□□□□ -0.44
MRPS28-209ENST00000522987 MTCP1P56278 107 aa12.33□□□□□ -0.44
MRPS28-209ENST00000522987 P2RX3P56373 397 aa12.33□□□□□ -0.44
MRPS28-209ENST00000522987 CD83Q01151 205 aa12.33□□□□□ -0.44
MRPS28-209ENST00000522987 ZNF85Q03923 595 aa12.33□□□□□ -0.44
MRPS28-209ENST00000522987 AESQ08117 197 aa12.33□□□□□ -0.44
MRPS28-209ENST00000522987 RBM39Q14498 530 aaKnown RBP12.33□□□□□ -0.44
MRPS28-209ENST00000522987 ATP6AP1Q15904 470 aa12.33□□□□□ -0.44
MRPS28-209ENST00000522987 KDM4DQ6B0I6 523 aa12.33□□□□□ -0.44
MRPS28-209ENST00000522987 OR10AC1Q8NH08 325 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms