RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 C1orf87Q8N0U7 546 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 SDR9C7Q8NEX9 313 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 PROKR2Q8NFJ6 384 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 OR13C2Q8NGS9 318 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 OR51A7Q8NH64 312 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 SLC7A6Q92536 515 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 NSMAFQ92636 917 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 FCGR1BQ92637 280 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 HIST1H2ACQ93077 130 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 TMEM80Q96HE8 168 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 OR5M11Q96RB7 305 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 IL4I1Q96RQ9 567 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 TEAD3Q99594 435 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 NKX3-1Q99801 234 aaPredicted RBP5.3□□□□□ -1.56
SDCBP-210ENST00000522843 BCL7BQ9BQE9 202 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 ZNF649Q9BS31 505 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 COPS4Q9BT78 406 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 NDEL1Q9GZM8 345 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 RBM38Q9H0Z9 239 aaKnown RBP5.3□□□□□ -1.56
SDCBP-210ENST00000522843 ISYNA1Q9NPH2 558 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 ACOT13Q9NPJ3 140 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 TBC1D23Q9NUY8 699 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 AASSQ9UDR5 926 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 DIMT1Q9UNQ2 313 aaKnown RBP5.3□□□□□ -1.56
SDCBP-210ENST00000522843 TIMM10BQ9Y5J6 103 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 CEPT1Q9Y6K0 416 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 TRAV27A0A087WT01 109 aa5.29□□□□□ -1.56
SDCBP-210ENST00000522843 RBMY1BA6NDE4 496 aaKnown RBP5.29□□□□□ -1.56
SDCBP-210ENST00000522843 RBMY1EA6NEQ0 496 aaKnown RBP5.29□□□□□ -1.56
SDCBP-210ENST00000522843 CENPBD1B2RD01 187 aa5.29□□□□□ -1.56
SDCBP-210ENST00000522843 OR6A2O95222 327 aa5.29□□□□□ -1.56
SDCBP-210ENST00000522843 FADS2O95864 444 aaKnown RBP5.29□□□□□ -1.56
SDCBP-210ENST00000522843 PAHP00439 452 aa5.29□□□□□ -1.56
SDCBP-210ENST00000522843 GYPAP02724 150 aa5.29□□□□□ -1.56
SDCBP-210ENST00000522843 IGKV2-30P06310 120 aa5.29□□□□□ -1.56
SDCBP-210ENST00000522843 CST2P09228 141 aa5.29□□□□□ -1.56
SDCBP-210ENST00000522843 RBMY1DP0C7P1 496 aaKnown RBP5.29□□□□□ -1.56
SDCBP-210ENST00000522843 DBTP11182 482 aaKnown RBP5.29□□□□□ -1.56
SDCBP-210ENST00000522843 C21orf33P30042 268 aaPredicted RBP5.29□□□□□ -1.56
SDCBP-210ENST00000522843 AQP2P41181 271 aa5.29□□□□□ -1.56
SDCBP-210ENST00000522843 HTR5AP47898 357 aa5.29□□□□□ -1.56
SDCBP-210ENST00000522843 TMBIM6P55061 237 aa5.29□□□□□ -1.56
SDCBP-210ENST00000522843 UCP3P55916 312 aa5.29□□□□□ -1.56
SDCBP-210ENST00000522843 VAMP2P63027 116 aa5.29□□□□□ -1.56
SDCBP-210ENST00000522843 RPL18Q07020 188 aaKnown RBP5.29□□□□□ -1.56
SDCBP-210ENST00000522843 GPR50Q13585 617 aa5.29□□□□□ -1.56
SDCBP-210ENST00000522843 ALG10Q5BKT4 473 aa5.29□□□□□ -1.56
SDCBP-210ENST00000522843 FBXW12Q6X9E4 464 aa5.29□□□□□ -1.56
SDCBP-210ENST00000522843 ADCK1Q86TW2 530 aa5.29□□□□□ -1.56
SDCBP-210ENST00000522843 CPOQ8IVL8 374 aa5.29□□□□□ -1.56
SDCBP-210ENST00000522843 IQCF1Q8N6M8 205 aa5.29□□□□□ -1.56
SDCBP-210ENST00000522843 NANOGP1Q8N7R0 232 aa5.29□□□□□ -1.56
SDCBP-210ENST00000522843 SLC37A3Q8NCC5 494 aa5.29□□□□□ -1.56
SDCBP-210ENST00000522843 ZNF485Q8NCK3 441 aa5.29□□□□□ -1.56
SDCBP-210ENST00000522843 BHLHE23Q8NDY6 225 aa5.29□□□□□ -1.56
SDCBP-210ENST00000522843 OR13F1Q8NGS4 319 aa5.29□□□□□ -1.56
SDCBP-210ENST00000522843 OR13G1Q8NGZ3 307 aa5.29□□□□□ -1.56
SDCBP-210ENST00000522843 MOSPD2Q8NHP6 518 aa5.29□□□□□ -1.56
SDCBP-210ENST00000522843 FANK1Q8TC84 345 aa5.29□□□□□ -1.56
SDCBP-210ENST00000522843 COG8Q96MW5 612 aa5.29□□□□□ -1.56
SDCBP-210ENST00000522843 ALG8Q9BVK2 526 aa5.29□□□□□ -1.56
SDCBP-210ENST00000522843 IFT27Q9BW83 186 aa5.29□□□□□ -1.56
SDCBP-210ENST00000522843 NPFFR1Q9GZQ6 430 aa5.29□□□□□ -1.56
SDCBP-210ENST00000522843 KCNN2Q9H2S1 579 aa5.29□□□□□ -1.56
SDCBP-210ENST00000522843 TXNIPQ9H3M7 391 aa5.29□□□□□ -1.56
SDCBP-210ENST00000522843 VCX3AQ9NNX9 186 aa5.29□□□□□ -1.56
SDCBP-210ENST00000522843 UFSP2Q9NUQ7 469 aa5.29□□□□□ -1.56
SDCBP-210ENST00000522843 PTTG3PQ9NZH4 202 aa5.29□□□□□ -1.56
SDCBP-210ENST00000522843 ONECUT1Q9UBC0 465 aa5.29□□□□□ -1.56
SDCBP-210ENST00000522843 LSM2Q9Y333 95 aaKnown RBP5.29□□□□□ -1.56
SDCBP-210ENST00000522843 IER3IP1Q9Y5U9 82 aa5.29□□□□□ -1.56
SDCBP-210ENST00000522843 SNX5Q9Y5X3 404 aa5.29□□□□□ -1.56
SDCBP-210ENST00000522843 OR6C68A6NDL8 312 aa5.28□□□□□ -1.56
SDCBP-210ENST00000522843 A6NIZ1 184 aa5.28□□□□□ -1.56
SDCBP-210ENST00000522843 NKX6-3A6NJ46 265 aa5.28□□□□□ -1.56
SDCBP-210ENST00000522843 RIIAD1A6NNX1 92 aa5.28□□□□□ -1.56
SDCBP-210ENST00000522843 IQCF6A8MYZ5 107 aa5.28□□□□□ -1.56
SDCBP-210ENST00000522843 MCIDASD6RGH6 385 aa5.28□□□□□ -1.56
SDCBP-210ENST00000522843 PRR23D1E9PI22 279 aaPredicted RBP5.28□□□□□ -1.56
SDCBP-210ENST00000522843 BLOC1S5-TXNDC5H3BN57 136 aa5.28□□□□□ -1.56
SDCBP-210ENST00000522843 KPNA4O00629 521 aaPredicted RBP5.28□□□□□ -1.56
SDCBP-210ENST00000522843 ECDO95905 644 aaPredicted RBP5.28□□□□□ -1.56
SDCBP-210ENST00000522843 MT-ND2P03891 347 aa5.28□□□□□ -1.56
SDCBP-210ENST00000522843 PRR23D2P0DMB1 279 aaPredicted RBP5.28□□□□□ -1.56
SDCBP-210ENST00000522843 COX5BP10606 129 aa5.28□□□□□ -1.56
SDCBP-210ENST00000522843 ATP6V1B1P15313 513 aa5.28□□□□□ -1.56
SDCBP-210ENST00000522843 HIST1H1CP16403 213 aaKnown RBP5.28□□□□□ -1.56
SDCBP-210ENST00000522843 ZNF3P17036 446 aa5.28□□□□□ -1.56
SDCBP-210ENST00000522843 PAICSP22234 425 aaKnown RBP5.28□□□□□ -1.56
SDCBP-210ENST00000522843 TUBG1P23258 451 aa5.28□□□□□ -1.56
SDCBP-210ENST00000522843 EEF1B2P24534 225 aaKnown RBP5.28□□□□□ -1.56
SDCBP-210ENST00000522843 CD200P41217 278 aa5.28□□□□□ -1.56
SDCBP-210ENST00000522843 CDKN2AP42771 156 aaKnown RBP5.28□□□□□ -1.56
SDCBP-210ENST00000522843 UBE2E1P51965 193 aa5.28□□□□□ -1.56
SDCBP-210ENST00000522843 BLVRAP53004 296 aa5.28□□□□□ -1.56
SDCBP-210ENST00000522843 RAP1BP61224 184 aa5.28□□□□□ -1.56
SDCBP-210ENST00000522843 RPL27P61353 136 aaKnown RBP5.28□□□□□ -1.56
SDCBP-210ENST00000522843 RAP1AP62834 184 aa5.28□□□□□ -1.56
SDCBP-210ENST00000522843 ZNF91Q05481 1191 aa5.28□□□□□ -1.56
SDCBP-210ENST00000522843 DCTN2Q13561 401 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms