RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 NAAAQ02083 359 aa9.27□□□□□ -0.93
RAB11FIP1-204ENST00000522774 PLGLB1Q02325 96 aa9.27□□□□□ -0.93
RAB11FIP1-204ENST00000522774 AIMP2Q13155 320 aaKnown RBP9.27□□□□□ -0.93
RAB11FIP1-204ENST00000522774 TFAP2EQ6VUC0 442 aa9.27□□□□□ -0.93
RAB11FIP1-204ENST00000522774 C5orf24Q7Z6I8 188 aa9.27□□□□□ -0.93
RAB11FIP1-204ENST00000522774 SLC5A7Q9GZV3 580 aa9.27□□□□□ -0.93
RAB11FIP1-204ENST00000522774 ABI3Q9P2A4 366 aa9.27□□□□□ -0.93
RAB11FIP1-204ENST00000522774 RPL36A-HNRNPH2H7BZ11 118 aa9.27□□□□□ -0.93
RAB11FIP1-204ENST00000522774 TSPAN4O14817 238 aa9.27□□□□□ -0.93
RAB11FIP1-204ENST00000522774 NUPL2O15504 423 aaKnown RBP9.27□□□□□ -0.93
RAB11FIP1-204ENST00000522774 GLI4P10075 376 aa9.27□□□□□ -0.93
RAB11FIP1-204ENST00000522774 FCGR2CP31995 323 aa9.27□□□□□ -0.93
RAB11FIP1-204ENST00000522774 PHLDA2Q53GA4 152 aa9.27□□□□□ -0.93
RAB11FIP1-204ENST00000522774 ATP1A1-AS1Q5TC04 95 aa9.27□□□□□ -0.93
RAB11FIP1-204ENST00000522774 OR2A2Q6IF42 318 aa9.27□□□□□ -0.93
RAB11FIP1-204ENST00000522774 NUFIP2Q7Z417 695 aaKnown RBP9.27□□□□□ -0.93
RAB11FIP1-204ENST00000522774 HPSE2Q8WWQ2 592 aa9.27□□□□□ -0.93
RAB11FIP1-204ENST00000522774 REPIN1Q9BWE0 567 aaKnown RBP9.27□□□□□ -0.93
RAB11FIP1-204ENST00000522774 LIPGQ9Y5X9 500 aa9.27□□□□□ -0.93
RAB11FIP1-204ENST00000522774 R4GN57 208 aa9.27□□□□□ -0.93
RAB11FIP1-204ENST00000522774 NGFP01138 241 aa9.26□□□□□ -0.93
RAB11FIP1-204ENST00000522774 OR5AC1P0C628 307 aa9.26□□□□□ -0.93
RAB11FIP1-204ENST00000522774 HKR1P10072 659 aa9.26□□□□□ -0.93
RAB11FIP1-204ENST00000522774 CD79AP11912 226 aa9.26□□□□□ -0.93
RAB11FIP1-204ENST00000522774 SPINK2P20155 84 aa9.26□□□□□ -0.93
RAB11FIP1-204ENST00000522774 BCL3P20749 454 aa9.26□□□□□ -0.93
RAB11FIP1-204ENST00000522774 MEOX1P50221 254 aa9.26□□□□□ -0.93
RAB11FIP1-204ENST00000522774 AKR1C2P52895 323 aa9.26□□□□□ -0.93
RAB11FIP1-204ENST00000522774 AKR1C1Q04828 323 aa9.26□□□□□ -0.93
RAB11FIP1-204ENST00000522774 MALLQ13021 153 aa9.26□□□□□ -0.93
RAB11FIP1-204ENST00000522774 PRDX4Q13162 271 aa9.26□□□□□ -0.93
RAB11FIP1-204ENST00000522774 MARC2Q969Z3 335 aa9.26□□□□□ -0.93
RAB11FIP1-204ENST00000522774 SLAMF9Q96A28 289 aa9.26□□□□□ -0.93
RAB11FIP1-204ENST00000522774 NARS2Q96I59 477 aaKnown RBP9.26□□□□□ -0.93
RAB11FIP1-204ENST00000522774 CNTNAP3BQ96NU0 1288 aa9.26□□□□□ -0.93
RAB11FIP1-204ENST00000522774 CNTNAP3Q9BZ76 1288 aa9.26□□□□□ -0.93
RAB11FIP1-204ENST00000522774 ZNF442Q9H7R0 627 aa9.26□□□□□ -0.93
RAB11FIP1-204ENST00000522774 ZNF286AQ9HBT8 521 aa9.26□□□□□ -0.93
RAB11FIP1-204ENST00000522774 TMEM100Q9NV29 134 aa9.26□□□□□ -0.93
RAB11FIP1-204ENST00000522774 DNAJB11Q9UBS4 358 aa9.26□□□□□ -0.93
RAB11FIP1-204ENST00000522774 ATPIF1Q9UII2 106 aa9.26□□□□□ -0.93
RAB11FIP1-204ENST00000522774 PRRC2CQ9Y520 2896 aaKnown RBP9.26□□□□□ -0.93
RAB11FIP1-204ENST00000522774 PQLC2LA1A4F0 135 aa9.26□□□□□ -0.93
RAB11FIP1-204ENST00000522774 FAM157CP0CG43 387 aa9.26□□□□□ -0.93
RAB11FIP1-204ENST00000522774 PET100P0DJ07 73 aa9.26□□□□□ -0.93
RAB11FIP1-204ENST00000522774 RCC1P18754 421 aaPredicted RBP9.26□□□□□ -0.93
RAB11FIP1-204ENST00000522774 GPM6AP51674 278 aa9.26□□□□□ -0.93
RAB11FIP1-204ENST00000522774 TMEM187Q14656 261 aa9.26□□□□□ -0.93
RAB11FIP1-204ENST00000522774 STK11Q15831 433 aa9.26□□□□□ -0.93
RAB11FIP1-204ENST00000522774 SPERTQ8NA61 448 aa9.26□□□□□ -0.93
RAB11FIP1-204ENST00000522774 OR11L1Q8NGX0 322 aa9.26□□□□□ -0.93
RAB11FIP1-204ENST00000522774 RTN4IP1Q8WWV3 396 aaPredicted RBP9.26□□□□□ -0.93
RAB11FIP1-204ENST00000522774 TECTBQ96PL2 329 aa9.26□□□□□ -0.93
RAB11FIP1-204ENST00000522774 PIGMQ9H3S5 423 aa9.26□□□□□ -0.93
RAB11FIP1-204ENST00000522774 NAA60Q9H7X0 242 aa9.26□□□□□ -0.93
RAB11FIP1-204ENST00000522774 C12orf4Q9NQ89 552 aa9.26□□□□□ -0.93
RAB11FIP1-204ENST00000522774 IL36RNQ9UBH0 155 aa9.26□□□□□ -0.93
RAB11FIP1-204ENST00000522774 MEMO1Q9Y316 297 aa9.26□□□□□ -0.93
RAB11FIP1-204ENST00000522774 STARD10Q9Y365 291 aa9.26□□□□□ -0.93
RAB11FIP1-204ENST00000522774 TNFSF15O95150 251 aa9.25□□□□□ -0.93
RAB11FIP1-204ENST00000522774 FUT3P21217 361 aa9.25□□□□□ -0.93
RAB11FIP1-204ENST00000522774 ABCA11PQ4W5N1 156 aa9.25□□□□□ -0.93
RAB11FIP1-204ENST00000522774 SMUG1Q53HV7 270 aa9.25□□□□□ -0.93
RAB11FIP1-204ENST00000522774 HES3Q5TGS1 186 aa9.25□□□□□ -0.93
RAB11FIP1-204ENST00000522774 RPL7L1Q6DKI1 246 aaKnown RBP9.25□□□□□ -0.93
RAB11FIP1-204ENST00000522774 APH1AQ96BI3 265 aa9.25□□□□□ -0.93
RAB11FIP1-204ENST00000522774 LDAHQ9H6V9 325 aa9.25□□□□□ -0.93
RAB11FIP1-204ENST00000522774 LOC400499M0QZD8 3231 aa9.25□□□□□ -0.93
RAB11FIP1-204ENST00000522774 ARHGAP21Q5T5U3 1957 aa9.25□□□□□ -0.93
RAB11FIP1-204ENST00000522774 ACTL6AO96019 429 aa9.25□□□□□ -0.93
RAB11FIP1-204ENST00000522774 SP1P08047 785 aa9.25□□□□□ -0.93
RAB11FIP1-204ENST00000522774 HAAOP46952 286 aa9.25□□□□□ -0.93
RAB11FIP1-204ENST00000522774 RAB1AP62820 205 aa9.25□□□□□ -0.93
RAB11FIP1-204ENST00000522774 TAGLNQ01995 201 aaKnown RBP9.25□□□□□ -0.93
RAB11FIP1-204ENST00000522774 IGSF11Q5DX21 431 aa9.25□□□□□ -0.93
RAB11FIP1-204ENST00000522774 OR5L1Q8NGL2 311 aa9.25□□□□□ -0.93
RAB11FIP1-204ENST00000522774 SLC2A9Q9NRM0 540 aa9.25□□□□□ -0.93
RAB11FIP1-204ENST00000522774 TUBD1Q9UJT1 453 aa9.25□□□□□ -0.93
RAB11FIP1-204ENST00000522774 LSM5Q9Y4Y9 91 aaKnown RBP9.25□□□□□ -0.93
RAB11FIP1-204ENST00000522774 DEDDO75618 318 aa9.25□□□□□ -0.93
RAB11FIP1-204ENST00000522774 SCGB1D2O95969 90 aa9.25□□□□□ -0.93
RAB11FIP1-204ENST00000522774 IFNA21P01568 189 aa9.25□□□□□ -0.93
RAB11FIP1-204ENST00000522774 AADACP22760 399 aa9.25□□□□□ -0.93
RAB11FIP1-204ENST00000522774 SRSF3P84103 164 aaKnown RBP9.25□□□□□ -0.93
RAB11FIP1-204ENST00000522774 DEFA5Q01523 94 aa9.25□□□□□ -0.93
RAB11FIP1-204ENST00000522774 ZNF273Q14593 569 aa9.25□□□□□ -0.93
RAB11FIP1-204ENST00000522774 MRPL21Q7Z2W9 205 aaKnown RBP9.25□□□□□ -0.93
RAB11FIP1-204ENST00000522774 LYZL2Q7Z4W2 148 aa9.25□□□□□ -0.93
RAB11FIP1-204ENST00000522774 MDS2Q8NDY4 140 aa9.25□□□□□ -0.93
RAB11FIP1-204ENST00000522774 RNF141Q8WVD5 230 aa9.25□□□□□ -0.93
RAB11FIP1-204ENST00000522774 LRRC46Q96FV0 321 aa9.25□□□□□ -0.93
RAB11FIP1-204ENST00000522774 PRSS50Q9UI38 385 aa9.25□□□□□ -0.93
RAB11FIP1-204ENST00000522774 PCNX2A6NKB5 2137 aa9.24□□□□□ -0.93
RAB11FIP1-204ENST00000522774 ZNF724A8MTY0 619 aa9.24□□□□□ -0.93
RAB11FIP1-204ENST00000522774 C3orf80F5H4A9 247 aa9.24□□□□□ -0.93
RAB11FIP1-204ENST00000522774 NME2P1O60361 137 aa9.24□□□□□ -0.93
RAB11FIP1-204ENST00000522774 NME2P22392 152 aa9.24□□□□□ -0.93
RAB11FIP1-204ENST00000522774 NOVA1P51513 510 aaKnown RBP9.24□□□□□ -0.93
RAB11FIP1-204ENST00000522774 MST1LQ2TV78 715 aa9.24□□□□□ -0.93
RAB11FIP1-204ENST00000522774 TMEM211Q6ICI0 200 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms