RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 NR2C2APQ86WQ0 139 aa12.21□□□□□ -0.45
SYNPO-205ENST00000522122 PTPMT1Q8WUK0 201 aaPredicted RBP12.21□□□□□ -0.45
SYNPO-205ENST00000522122 CFHR5Q9BXR6 569 aa12.21□□□□□ -0.45
SYNPO-205ENST00000522122 COMMD5Q9GZQ3 224 aa12.21□□□□□ -0.45
SYNPO-205ENST00000522122 HIF1ANQ9NWT6 349 aa12.21□□□□□ -0.45
SYNPO-205ENST00000522122 C3orf85A0A1B0GTC6 90 aa12.21□□□□□ -0.45
SYNPO-205ENST00000522122 TMEM218A2RU14 115 aa12.21□□□□□ -0.45
SYNPO-205ENST00000522122 OR7C2O60412 319 aa12.21□□□□□ -0.45
SYNPO-205ENST00000522122 FGF7P21781 194 aa12.21□□□□□ -0.45
SYNPO-205ENST00000522122 KIR3DL2P43630 455 aa12.21□□□□□ -0.45
SYNPO-205ENST00000522122 RTL8BQ17RB0 113 aa12.21□□□□□ -0.45
SYNPO-205ENST00000522122 VASH2Q86V25 355 aa12.21□□□□□ -0.45
SYNPO-205ENST00000522122 TMEM18Q96B42 140 aa12.21□□□□□ -0.45
SYNPO-205ENST00000522122 BOD1Q96IK1 185 aa12.21□□□□□ -0.45
SYNPO-205ENST00000522122 PILRAQ9UKJ1 303 aa12.21□□□□□ -0.45
SYNPO-205ENST00000522122 A0A1W2PPH5 198 aa12.21□□□□□ -0.45
SYNPO-205ENST00000522122 FAM24AA6NFZ4 105 aa12.21□□□□□ -0.45
SYNPO-205ENST00000522122 CTSDP07339 412 aaPredicted RBP12.21□□□□□ -0.45
SYNPO-205ENST00000522122 MMP16P51512 607 aa12.21□□□□□ -0.45
SYNPO-205ENST00000522122 LSM6P62312 80 aaKnown RBP12.21□□□□□ -0.45
SYNPO-205ENST00000522122 ZNF528Q3MIS6 628 aa12.21□□□□□ -0.45
SYNPO-205ENST00000522122 AARDQ4LEZ3 155 aa12.21□□□□□ -0.45
SYNPO-205ENST00000522122 ACER2Q5QJU3 275 aa12.21□□□□□ -0.45
SYNPO-205ENST00000522122 SMIM15Q7Z3B0 74 aa12.21□□□□□ -0.45
SYNPO-205ENST00000522122 CRIPAKQ8N1N5 446 aa12.21□□□□□ -0.45
SYNPO-205ENST00000522122 UBALD1Q8TB05 177 aa12.21□□□□□ -0.45
SYNPO-205ENST00000522122 EDEM2Q9BV94 578 aa12.21□□□□□ -0.45
SYNPO-205ENST00000522122 PECRQ9BY49 303 aa12.21□□□□□ -0.45
SYNPO-205ENST00000522122 DTX4Q9Y2E6 619 aa12.21□□□□□ -0.45
SYNPO-205ENST00000522122 TRBV5-7A0A0A0MS05 114 aa12.21□□□□□ -0.46
SYNPO-205ENST00000522122 TMEM30CPA0ZSE6 113 aa12.21□□□□□ -0.46
SYNPO-205ENST00000522122 K7EQM0 130 aa12.21□□□□□ -0.46
SYNPO-205ENST00000522122 CYTIPO60759 359 aa12.21□□□□□ -0.46
SYNPO-205ENST00000522122 NGFRP08138 427 aa12.21□□□□□ -0.46
SYNPO-205ENST00000522122 TAAR9Q96RI9 348 aa12.21□□□□□ -0.46
SYNPO-205ENST00000522122 NPAS1Q99742 590 aa12.21□□□□□ -0.46
SYNPO-205ENST00000522122 AICDAQ9GZX7 198 aa12.21□□□□□ -0.46
SYNPO-205ENST00000522122 ANXA10Q9UJ72 324 aa12.21□□□□□ -0.46
SYNPO-205ENST00000522122 UBE2L5PA0A1B0GUS4 154 aa12.2□□□□□ -0.46
SYNPO-205ENST00000522122 C5orf67F2Z3F1 127 aa12.2□□□□□ -0.46
SYNPO-205ENST00000522122 G3V3Q6 166 aa12.2□□□□□ -0.46
SYNPO-205ENST00000522122 OR2A4O95047 310 aa12.2□□□□□ -0.46
SYNPO-205ENST00000522122 CNIH1O95406 144 aa12.2□□□□□ -0.46
SYNPO-205ENST00000522122 BGLAPP02818 100 aa12.2□□□□□ -0.46
SYNPO-205ENST00000522122 PRDX4Q13162 271 aa12.2□□□□□ -0.46
SYNPO-205ENST00000522122 ZNF660Q6AZW8 331 aaPredicted RBP12.2□□□□□ -0.46
SYNPO-205ENST00000522122 MOB1BQ7L9L4 216 aa12.2□□□□□ -0.46
SYNPO-205ENST00000522122 OR10D3Q8NH80 312 aa12.2□□□□□ -0.46
SYNPO-205ENST00000522122 OR2A7Q96R45 310 aa12.2□□□□□ -0.46
SYNPO-205ENST00000522122 TPPP3Q9BW30 176 aa12.2□□□□□ -0.46
SYNPO-205ENST00000522122 MRPL22Q9NWU5 206 aaKnown RBP12.2□□□□□ -0.46
SYNPO-205ENST00000522122 PPP1R14DQ9NXH3 145 aa12.2□□□□□ -0.46
SYNPO-205ENST00000522122 MMP24Q9Y5R2 645 aa12.2□□□□□ -0.46
SYNPO-205ENST00000522122 GBF1Q92538 1859 aa12.2□□□□□ -0.46
SYNPO-205ENST00000522122 FOXS1O43638 330 aa12.2□□□□□ -0.46
SYNPO-205ENST00000522122 TRAF3IP2O43734 574 aaPredicted RBP12.2□□□□□ -0.46
SYNPO-205ENST00000522122 PATE4P0C8F1 98 aa12.2□□□□□ -0.46
SYNPO-205ENST00000522122 SMIM10L1P0DMW3 83 aa12.2□□□□□ -0.46
SYNPO-205ENST00000522122 SRD5A2P31213 254 aa12.2□□□□□ -0.46
SYNPO-205ENST00000522122 OR1C1Q15619 314 aa12.2□□□□□ -0.46
SYNPO-205ENST00000522122 DGAT2L6Q6ZPD8 337 aa12.2□□□□□ -0.46
SYNPO-205ENST00000522122 KDF1Q8NAX2 398 aaPredicted RBP12.2□□□□□ -0.46
SYNPO-205ENST00000522122 SMIM10Q96HG1 83 aa12.2□□□□□ -0.46
SYNPO-205ENST00000522122 TOLLIPQ9H0E2 274 aa12.2□□□□□ -0.46
SYNPO-205ENST00000522122 ZNF355PQ9NSJ1 428 aa12.2□□□□□ -0.46
SYNPO-205ENST00000522122 UQCC1Q9NVA1 299 aa12.2□□□□□ -0.46
SYNPO-205ENST00000522122 OR2M5A3KFT3 312 aa12.2□□□□□ -0.46
SYNPO-205ENST00000522122 ERHP84090 104 aaKnown RBP12.2□□□□□ -0.46
SYNPO-205ENST00000522122 RASL10BQ96S79 203 aa12.2□□□□□ -0.46
SYNPO-205ENST00000522122 WDR13Q9H1Z4 485 aa12.2□□□□□ -0.46
SYNPO-205ENST00000522122 WNT16Q9UBV4 365 aa12.2□□□□□ -0.46
SYNPO-205ENST00000522122 A0A1B0GTQ1 180 aa12.2□□□□□ -0.46
SYNPO-205ENST00000522122 TOX3O15405 576 aaPredicted RBP12.2□□□□□ -0.46
SYNPO-205ENST00000522122 RD3LP0DJH9 198 aa12.2□□□□□ -0.46
SYNPO-205ENST00000522122 NOVA1P51513 510 aaKnown RBP12.2□□□□□ -0.46
SYNPO-205ENST00000522122 LGALS4P56470 323 aa12.2□□□□□ -0.46
SYNPO-205ENST00000522122 RAC3P60763 192 aa12.2□□□□□ -0.46
SYNPO-205ENST00000522122 RNF133Q8WVZ7 376 aa12.2□□□□□ -0.46
SYNPO-205ENST00000522122 FNDC1Q4ZHG4 1894 aaPredicted RBP12.2□□□□□ -0.46
SYNPO-205ENST00000522122 CDK2AP1O14519 115 aa12.19□□□□□ -0.46
SYNPO-205ENST00000522122 FABP9Q0Z7S8 132 aa12.19□□□□□ -0.46
SYNPO-205ENST00000522122 HES1Q14469 280 aa12.19□□□□□ -0.46
SYNPO-205ENST00000522122 DBX2Q6ZNG2 339 aa12.19□□□□□ -0.46
SYNPO-205ENST00000522122 FAM24BQ8N5W8 94 aa12.19□□□□□ -0.46
SYNPO-205ENST00000522122 PTX4Q96A99 478 aa12.19□□□□□ -0.46
SYNPO-205ENST00000522122 MS4A3Q96HJ5 214 aa12.19□□□□□ -0.46
SYNPO-205ENST00000522122 SPTA1P02549 2419 aa12.19□□□□□ -0.46
SYNPO-205ENST00000522122 ZNF320A2RRD8 509 aa12.19□□□□□ -0.46
SYNPO-205ENST00000522122 UPK3AO75631 287 aa12.19□□□□□ -0.46
SYNPO-205ENST00000522122 NGFP01138 241 aa12.19□□□□□ -0.46
SYNPO-205ENST00000522122 FABP1P07148 127 aa12.19□□□□□ -0.46
SYNPO-205ENST00000522122 ASAH2BP0C7U1 165 aa12.19□□□□□ -0.46
SYNPO-205ENST00000522122 EPHA8P29322 1005 aaPredicted RBP12.19□□□□□ -0.46
SYNPO-205ENST00000522122 POMT1Q9Y6A1 747 aa12.19□□□□□ -0.46
SYNPO-205ENST00000522122 TRGV5A0A0B4J1U4 118 aa12.19□□□□□ -0.46
SYNPO-205ENST00000522122 OR5G3P0C626 314 aa12.19□□□□□ -0.46
SYNPO-205ENST00000522122 VSIG8P0DPA2 414 aa12.19□□□□□ -0.46
SYNPO-205ENST00000522122 FSTP19883 344 aa12.19□□□□□ -0.46
SYNPO-205ENST00000522122 HNF1AP20823 631 aa12.19□□□□□ -0.46
SYNPO-205ENST00000522122 TLE1Q04724 770 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms