RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 IFT20Q8IY31 132 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 C19orf18Q8NEA5 215 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 OR4K5Q8NGD3 323 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 OR10Z1Q8NGY1 313 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 LGALS14Q8TCE9 139 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 TCEAL3Q969E4 200 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 TM4SF18Q96CE8 201 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 TLCD1Q96CP7 247 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 NARS2Q96I59 477 aaKnown RBP2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 CCDC42Q96M95 316 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 RBBP8Q99708 897 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 C20orf144Q9BQM9 153 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 SLC38A10Q9HBR0 1119 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 C6orf50Q9HD87 102 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 HMG20AQ9NP66 347 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 ZNF355PQ9NSJ1 428 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 OPN4Q9UHM6 478 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 ZNF229Q9UJW7 825 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 ZNF222Q9UK12 451 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 SIGLEC7Q9Y286 467 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 ACOT9Q9Y305 439 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 ZNF106Q9H2Y7 1883 aaKnown RBP2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 NYNRINQ9P2P1 1898 aaKnown RBP2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 KIF26AQ9ULI4 1882 aaPredicted RBP2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 NUP205Q92621 2012 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 PLXNA3P51805 1871 aa2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 TVP23AA6NH52 213 aa2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 DFFAO00273 331 aa2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 TRAPPC3O43617 180 aa2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 ALOX12BO75342 701 aa2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 SERPINB7O75635 380 aa2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 GCGP01275 180 aa2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 APCSP02743 223 aa2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 UCHL3P15374 230 aa2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 GTF2A1P52655 376 aaPredicted RBP2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 RAP1AP62834 184 aa2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 CDK5Q00535 292 aa2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 XRCC4Q13426 336 aa2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 RBMY1FQ15415 496 aaKnown RBP2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 TAL2Q16559 108 aa2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 UBE2SQ16763 222 aa2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 TNFAIP8L3Q5GJ75 292 aa2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 SAXO2Q658L1 398 aa2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 KCTD16Q68DU8 428 aa2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 SETD3Q86TU7 594 aaPredicted RBP2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 NT5DC3Q86UY8 548 aa2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 WDFY1Q8IWB7 410 aa2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 ST13P4Q8IZP2 240 aaPredicted RBP2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 ZCCHC24Q8N2G6 241 aaKnown RBP2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 OR4M1Q8NGD0 313 aa2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 COQ8AQ8NI60 647 aa2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 UBALD1Q8TB05 177 aa2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 RXFP2Q8WXD0 754 aa2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 LRRC45Q96CN5 670 aa2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 FLYWCH2Q96CP2 140 aaKnown RBP2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 PDXPQ96GD0 296 aa2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 RNF170Q96K19 258 aa2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 RDH12Q96NR8 316 aa2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 OR4K3Q96R72 315 aa2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 CAMK2N2Q96S95 79 aa2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 SULT4A1Q9BR01 284 aa2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 TMEM109Q9BVC6 243 aa2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 TOLLIPQ9H0E2 274 aa2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 GOLPH3Q9H4A6 298 aa2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 ZNF430Q9H8G1 570 aaPredicted RBP2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 ANKHQ9HCJ1 492 aa2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 ZNRD1Q9P1U0 126 aa2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 CTSFQ9UBX1 484 aa2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 RAB26Q9ULW5 256 aa2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 V9GYY9 64 aa2.06□□□□□ -2.08
HMGN1P28-201ENST00000521340 KIAA1549LQ6ZVL6 1849 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 KIAA1671Q9BY89 1806 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 OBSL1O75147 1896 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 PLXNA4Q9HCM2 1894 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 ANAPC1Q9H1A4 1944 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 DOCK9Q9BZ29 2069 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 LINC00854A0A1B0GVQ3 168 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 GOLGA6L10A6NI86 522 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 IQCF5A8MTL0 148 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 PRMT5O14744 637 aaPredicted RBP2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 PSPHP1O15172 72 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 CETN3O15182 167 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 GATCO43716 136 aaKnown RBP2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 IGLV3-25P01717 112 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 CD8AP01732 235 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 LIPCP11150 499 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 DTYMKP23919 212 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 MYL9P24844 172 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 PAX6P26367 422 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 CD151P48509 253 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 MARCKSL1P49006 195 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 TAS2R46P59540 309 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 NCALDP61601 193 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 IFFO1Q0D2I5 559 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 INCA1Q0VD86 236 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 ZBTB6Q15916 424 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 SNCBQ16143 134 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 EXOC3L4Q17RC7 722 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 LINC00303Q3SY05 128 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 C6orf99Q4VX62 202 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms