RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 FAM25EA8MYX2 175 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 ZNF732B4DXR9 585 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 E9PBE3 544 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 PCDH7O60245 1069 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 OR10H3O60404 316 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 RHBDL1O75783 438 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 NUDT14O95848 222 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 TXNDC12O95881 172 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 HMGN2P05204 90 aaKnown RBP2.94□□□□□ -1.94
VPS13B-208ENST00000521037 FBP1P09467 338 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 CD79AP11912 226 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 FCGR1AP12314 374 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 NCF2P19878 526 aaPredicted RBP2.94□□□□□ -1.94
VPS13B-208ENST00000521037 CA6P23280 308 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 ACKR3P25106 362 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 CNTFRP26992 372 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 CHI3L1P36222 383 aaPredicted RBP2.94□□□□□ -1.94
VPS13B-208ENST00000521037 PTGFRP43088 359 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 ALDH3B2P48448 385 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 PPT1P50897 306 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 RPL14P50914 215 aaKnown RBP2.94□□□□□ -1.94
VPS13B-208ENST00000521037 ATP6V0D1P61421 351 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 NAA20P61599 178 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 GAGE5Q13069 117 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 GAGE6Q13070 117 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 KIAA0040Q15053 153 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 TAF13Q15543 124 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 ZNF181Q2M3W8 571 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 MS4A18Q3C1V0 323 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 KCTD21Q4G0X4 260 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 SAMD4BQ5PRF9 694 aaKnown RBP2.94□□□□□ -1.94
VPS13B-208ENST00000521037 CLEC12AQ5QGZ9 265 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 DCST2Q5T1A1 773 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 ANKRD26P1Q6NSI1 321 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 DHRS11Q6UWP2 260 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 HACD2Q6Y1H2 254 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 ERASQ7Z444 233 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 ABHD12BQ7Z5M8 362 aaPredicted RBP2.94□□□□□ -1.94
VPS13B-208ENST00000521037 CMC1Q7Z7K0 106 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 C11orf42Q8N5U0 333 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 TRIML2Q8N7C3 387 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 PRR26Q8N8Z3 221 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 SLC30A7Q8NEW0 376 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 SLC25A40Q8TBP6 338 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 FNDC8Q8TC99 324 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 SLC7A13Q8TCU3 470 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 NPRL2Q8WTW4 380 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 PYDC1Q8WXC3 89 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 BPIFA2Q96DR5 249 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 ASB9Q96DX5 294 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 POM121L2Q96KW2 1035 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 LRR1Q96L50 414 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 DUX3Q96PT4 197 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 RAB40CQ96S21 281 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 STACQ99469 402 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 SDF2Q99470 211 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 GPR22Q99680 433 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 FAIM2Q9BWQ8 316 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 EBPLQ9BY08 206 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 OR2J1Q9GZK6 312 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 RBM38Q9H0Z9 239 aaKnown RBP2.94□□□□□ -1.94
VPS13B-208ENST00000521037 ELOVL6Q9H5J4 265 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 C3orf14Q9HBI5 128 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 SIRT7Q9NRC8 400 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 SDR39U1Q9NRG7 319 aaPredicted RBP2.94□□□□□ -1.94
VPS13B-208ENST00000521037 P2RX2Q9UBL9 471 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 MIOXQ9UGB7 285 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 RSL24D1Q9UHA3 163 aaKnown RBP2.94□□□□□ -1.94
VPS13B-208ENST00000521037 RIMS3Q9UJD0 308 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 SMAD5-AS1Q9Y6J3 95 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 CCDC160A6NGH7 325 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 BBIP1A8MTZ0 92 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 H3BNH8 94 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 L7N2F9 121 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 MANBAO00462 879 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 CCSO14618 274 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 RTL8CO15255 209 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 MLNRO43193 412 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 MT-ND1P03886 318 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 MT-ND2P03891 347 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 RPS17P08708 135 aaKnown RBP2.93□□□□□ -1.94
VPS13B-208ENST00000521037 PNMTP11086 282 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 GALP22466 123 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 HMOX2P30519 316 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 NUDT2P50583 147 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 DNAJB13P59910 316 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 RPL23AP62750 156 aaKnown RBP2.93□□□□□ -1.94
VPS13B-208ENST00000521037 PHEXP78562 749 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 RPL24P83731 157 aaKnown RBP2.93□□□□□ -1.94
VPS13B-208ENST00000521037 TNFAIP6P98066 277 aaPredicted RBP2.93□□□□□ -1.94
VPS13B-208ENST00000521037 IL5RAQ01344 420 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 RBBP4Q09028 425 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 BNIP2Q12982 314 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 SRSF9Q13242 221 aaKnown RBP eCLIP2.93□□□□□ -1.94
VPS13B-208ENST00000521037 OR7A5Q15622 319 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 AANATQ16613 207 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 ZNF829Q3KNS6 432 aaPredicted RBP2.93□□□□□ -1.94
VPS13B-208ENST00000521037 ZBED5Q49AG3 693 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 COQ5Q5HYK3 327 aa2.93□□□□□ -1.94
VPS13B-208ENST00000521037 LIPKQ5VXJ0 399 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms