RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 TVP23AA6NH52 213 aa1.4□□□□□ -2.19
SKP1-207ENST00000520417 H0YC42 278 aa1.4□□□□□ -2.19
SKP1-207ENST00000520417 ENSAO43768 121 aaKnown RBP1.4□□□□□ -2.19
SKP1-207ENST00000520417 IGHV3-53P01767 116 aa1.4□□□□□ -2.19
SKP1-207ENST00000520417 STAG3L2P0CL84 134 aa1.4□□□□□ -2.19
SKP1-207ENST00000520417 LIPCP11150 499 aa1.4□□□□□ -2.19
SKP1-207ENST00000520417 PTHLHP12272 177 aa1.4□□□□□ -2.19
SKP1-207ENST00000520417 TAC1P20366 129 aa1.4□□□□□ -2.19
SKP1-207ENST00000520417 IMPA1P29218 277 aa1.4□□□□□ -2.19
SKP1-207ENST00000520417 DEKP35659 375 aaKnown RBP1.4□□□□□ -2.19
SKP1-207ENST00000520417 GPR4P46093 362 aa1.4□□□□□ -2.19
SKP1-207ENST00000520417 CCL23P55773 120 aa1.4□□□□□ -2.19
SKP1-207ENST00000520417 KRTAP25-1Q3LHN0 102 aa1.4□□□□□ -2.19
SKP1-207ENST00000520417 CYP4Z1Q86W10 505 aa1.4□□□□□ -2.19
SKP1-207ENST00000520417 AMN1Q8IY45 258 aa1.4□□□□□ -2.19
SKP1-207ENST00000520417 PDCL2Q8N4E4 241 aa1.4□□□□□ -2.19
SKP1-207ENST00000520417 EIF4E3Q8N5X7 224 aaKnown RBP1.4□□□□□ -2.19
SKP1-207ENST00000520417 LY6G5BQ8NDX9 201 aa1.4□□□□□ -2.19
SKP1-207ENST00000520417 OR8A1Q8NGG7 326 aa1.4□□□□□ -2.19
SKP1-207ENST00000520417 OR8S1Q8NH09 359 aa1.4□□□□□ -2.19
SKP1-207ENST00000520417 RILPQ96NA2 401 aa1.4□□□□□ -2.19
SKP1-207ENST00000520417 YPEL4Q96NS1 127 aa1.4□□□□□ -2.19
SKP1-207ENST00000520417 CHID1Q9BWS9 393 aa1.4□□□□□ -2.19
SKP1-207ENST00000520417 SHCBP1LQ9BZQ2 653 aa1.4□□□□□ -2.19
SKP1-207ENST00000520417 CHRNA10Q9GZZ6 450 aa1.4□□□□□ -2.19
SKP1-207ENST00000520417 ASB7Q9H672 318 aa1.4□□□□□ -2.19
SKP1-207ENST00000520417 ANKHQ9HCJ1 492 aa1.4□□□□□ -2.19
SKP1-207ENST00000520417 VCX3AQ9NNX9 186 aa1.4□□□□□ -2.19
SKP1-207ENST00000520417 C12orf4Q9NQ89 552 aa1.4□□□□□ -2.19
SKP1-207ENST00000520417 DDIT4Q9NX09 232 aa1.4□□□□□ -2.19
SKP1-207ENST00000520417 ANXA10Q9UJ72 324 aa1.4□□□□□ -2.19
SKP1-207ENST00000520417 ZNF706Q9Y5V0 76 aaPredicted RBP1.4□□□□□ -2.19
SKP1-207ENST00000520417 SSH2Q76I76 1423 aa1.4□□□□□ -2.19
SKP1-207ENST00000520417 BAZ1BQ9UIG0 1483 aaKnown RBP1.39□□□□□ -2.19
SKP1-207ENST00000520417 IGKV1OR2-108A0A075B7D4 117 aa1.39□□□□□ -2.19
SKP1-207ENST00000520417 A0A0B4J2C4 111 aa1.39□□□□□ -2.19
SKP1-207ENST00000520417 UPK1AO00322 258 aa1.39□□□□□ -2.19
SKP1-207ENST00000520417 ZNF593O00488 134 aaPredicted RBP1.39□□□□□ -2.19
SKP1-207ENST00000520417 UPK2O00526 184 aa1.39□□□□□ -2.19
SKP1-207ENST00000520417 PRMT5O14744 637 aaPredicted RBP1.39□□□□□ -2.19
SKP1-207ENST00000520417 SLC37A4O43826 429 aa1.39□□□□□ -2.19
SKP1-207ENST00000520417 PSIP1O75475 530 aaKnown RBP1.39□□□□□ -2.19
SKP1-207ENST00000520417 CPSF4O95639 269 aaKnown RBP1.39□□□□□ -2.19
SKP1-207ENST00000520417 TRGV3P03979 118 aa1.39□□□□□ -2.19
SKP1-207ENST00000520417 SCGB1C2P0DMR2 95 aa1.39□□□□□ -2.19
SKP1-207ENST00000520417 ZNF708P17019 499 aa1.39□□□□□ -2.19
SKP1-207ENST00000520417 HTR2CP28335 458 aa1.39□□□□□ -2.19
SKP1-207ENST00000520417 CRABP2P29373 138 aa1.39□□□□□ -2.19
SKP1-207ENST00000520417 IL12BP29460 328 aa1.39□□□□□ -2.19
SKP1-207ENST00000520417 FOXA1P55317 472 aa1.39□□□□□ -2.19
SKP1-207ENST00000520417 BNIP2Q12982 314 aa1.39□□□□□ -2.19
SKP1-207ENST00000520417 DYNC1I2Q13409 638 aaKnown RBP1.39□□□□□ -2.19
SKP1-207ENST00000520417 LINC00303Q3SY05 128 aa1.39□□□□□ -2.19
SKP1-207ENST00000520417 ZNF404Q494X3 552 aa1.39□□□□□ -2.19
SKP1-207ENST00000520417 C6orf183Q5T699 404 aa1.39□□□□□ -2.19
SKP1-207ENST00000520417 ATPAF2Q8N5M1 289 aa1.39□□□□□ -2.19
SKP1-207ENST00000520417 LINC00337Q8N6G1 96 aa1.39□□□□□ -2.19
SKP1-207ENST00000520417 OR2K2Q8NGT1 345 aa1.39□□□□□ -2.19
SKP1-207ENST00000520417 OR6K3Q8NGY3 331 aa1.39□□□□□ -2.19
SKP1-207ENST00000520417 MUC7Q8TAX7 377 aa1.39□□□□□ -2.19
SKP1-207ENST00000520417 SCGB1C1Q8TD33 95 aa1.39□□□□□ -2.19
SKP1-207ENST00000520417 DOK4Q8TEW6 326 aa1.39□□□□□ -2.19
SKP1-207ENST00000520417 TNFRSF14Q92956 283 aa1.39□□□□□ -2.19
SKP1-207ENST00000520417 ZNF75AQ96N20 296 aa1.39□□□□□ -2.19
SKP1-207ENST00000520417 BCL7BQ9BQE9 202 aa1.39□□□□□ -2.19
SKP1-207ENST00000520417 ANAPC13Q9BS18 74 aa1.39□□□□□ -2.19
SKP1-207ENST00000520417 TM6SF2Q9BZW4 377 aa1.39□□□□□ -2.19
SKP1-207ENST00000520417 TSGA10Q9BZW7 698 aa1.39□□□□□ -2.19
SKP1-207ENST00000520417 TXNIPQ9H3M7 391 aa1.39□□□□□ -2.19
SKP1-207ENST00000520417 RHOFQ9HBH0 211 aa1.39□□□□□ -2.19
SKP1-207ENST00000520417 NLE1Q9NVX2 485 aaPredicted RBP1.39□□□□□ -2.19
SKP1-207ENST00000520417 DNAJC27Q9NZQ0 273 aa1.39□□□□□ -2.19
SKP1-207ENST00000520417 KIAA1671Q9BY89 1806 aa1.38□□□□□ -2.19
SKP1-207ENST00000520417 C2orf16Q68DN1 1984 aa1.38□□□□□ -2.19
SKP1-207ENST00000520417 BRCA1P38398 1863 aaKnown RBP1.38□□□□□ -2.19
SKP1-207ENST00000520417 IGHV3-21A0A0B4J1V1 117 aa1.38□□□□□ -2.19
SKP1-207ENST00000520417 SLC5A10A0PJK1 596 aa1.38□□□□□ -2.19
SKP1-207ENST00000520417 MYBPHLA2RUH7 354 aa1.38□□□□□ -2.19
SKP1-207ENST00000520417 SDHAF1A6NFY7 115 aa1.38□□□□□ -2.19
SKP1-207ENST00000520417 ZNF729A6NN14 1252 aaPredicted RBP1.38□□□□□ -2.19
SKP1-207ENST00000520417 OR2AT4A6NND4 320 aa1.38□□□□□ -2.19
SKP1-207ENST00000520417 CD300LBA8K4G0 201 aa1.38□□□□□ -2.19
SKP1-207ENST00000520417 GGTLC3B5MD39 225 aa1.38□□□□□ -2.19
SKP1-207ENST00000520417 F5H5P2 479 aa1.38□□□□□ -2.19
SKP1-207ENST00000520417 K7EPK0 472 aa1.38□□□□□ -2.19
SKP1-207ENST00000520417 ISLRO14498 428 aa1.38□□□□□ -2.19
SKP1-207ENST00000520417 RFXANKO14593 260 aa1.38□□□□□ -2.19
SKP1-207ENST00000520417 SNAI1O95863 264 aaPredicted RBP1.38□□□□□ -2.19
SKP1-207ENST00000520417 XKP51811 444 aa1.38□□□□□ -2.19
SKP1-207ENST00000520417 KRTAP12-1P59990 96 aa1.38□□□□□ -2.19
SKP1-207ENST00000520417 STX4Q12846 297 aa1.38□□□□□ -2.19
SKP1-207ENST00000520417 TPBGQ13641 420 aa1.38□□□□□ -2.19
SKP1-207ENST00000520417 GPR176Q14439 515 aa1.38□□□□□ -2.19
SKP1-207ENST00000520417 ACTBL2Q562R1 376 aa1.38□□□□□ -2.19
SKP1-207ENST00000520417 CLLU1OSQ5K130 101 aa1.38□□□□□ -2.19
SKP1-207ENST00000520417 WDR59Q6PJI9 974 aa1.38□□□□□ -2.19
SKP1-207ENST00000520417 CLEC18BQ6UXF7 455 aa1.38□□□□□ -2.19
SKP1-207ENST00000520417 ASCL4Q6XD76 172 aa1.38□□□□□ -2.19
SKP1-207ENST00000520417 Q6ZQT7 251 aa1.38□□□□□ -2.19
SKP1-207ENST00000520417 TMPPEQ6ZT21 453 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms