RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 FARSAQ9Y285 508 aaKnown RBP4.38□□□□□ -1.71
SDC2-204ENST00000519914 PTRH2Q9Y3E5 179 aaKnown RBP4.38□□□□□ -1.71
SDC2-204ENST00000519914 SDK1Q7Z5N4 2213 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 MED12Q93074 2177 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 A0A0C4DFX4 3053 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 USP34Q70CQ2 3546 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 PCSK5Q92824 1860 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 IGKV3D-15A0A087WSY6 115 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 NSG1A0A0A6YYJ2 146 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 A0A1W2PP11 408 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 C5orf63A6NC05 138 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 FAM90A10PA6NDY2 464 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 FAM90A18PA6NE21 464 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 FAM90A16PA6NEW6 464 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 FAM90A20PA6NIJ5 464 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 FAM90A8PA6NJQ4 464 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 LRRC3CA6NJW4 275 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 FAM90A7PA6NKC0 464 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 FAM90A22PA8MWA6 464 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 FAM90A12PA8MX19 464 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 FAM90A5PA8MXJ8 464 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 FAM90A23PA8MXZ1 464 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 C22orf46C9J442 243 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 RPL36A-HNRNPH2H7BZ11 118 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 TAAR5O14804 337 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 CYTIPO60759 359 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 SPDEFO95238 335 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 CSTBP04080 98 aaKnown RBP4.37□□□□□ -1.71
SDC2-204ENST00000519914 GAPDHP04406 335 aaKnown RBP4.37□□□□□ -1.71
SDC2-204ENST00000519914 THBDP07204 575 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 CELA2AP08217 269 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 FAM90A15PP0C7V4 464 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 FAM90A13PP0C7W8 464 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 FAM90A14PP0C7W9 464 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 FAM90A24PP0C7X0 464 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 PET100P0DJ07 73 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 COX5BP10606 129 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 TPT1P13693 172 aaKnown RBP4.37□□□□□ -1.71
SDC2-204ENST00000519914 AMY2BP19961 511 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 PVALBP20472 110 aaPredicted RBP4.37□□□□□ -1.71
SDC2-204ENST00000519914 AVPR2P30518 371 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 FOLR3P41439 243 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 LUMP51884 338 aaPredicted RBP4.37□□□□□ -1.71
SDC2-204ENST00000519914 UCP3P55916 312 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 GFRA1P56159 465 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 RAB2AP61019 212 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 EIF5AP63241 154 aaKnown RBP4.37□□□□□ -1.71
SDC2-204ENST00000519914 CNN3Q15417 329 aaKnown RBP4.37□□□□□ -1.71
SDC2-204ENST00000519914 OR8B8Q15620 311 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 SGCAQ16586 387 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 ANKRD55Q3KP44 614 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 PRAMEF20Q5VT98 475 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 RAET1LQ5VY80 246 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 CARD17Q5XLA6 110 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 DHRS11Q6UWP2 260 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 PLXDC2Q6UX71 529 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 COLCA1Q6ZS62 124 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 C1QL2Q7Z5L3 287 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 PPP1R32Q7Z5V6 425 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 RTN4RL2Q86UN3 420 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 ZSCAN4Q8NAM6 433 aaPredicted RBP4.37□□□□□ -1.71
SDC2-204ENST00000519914 INO80EQ8NBZ0 244 aaPredicted RBP4.37□□□□□ -1.71
SDC2-204ENST00000519914 SLC24A4Q8NFF2 622 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 DMBX1Q8NFW5 382 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 SEMA6DQ8NFY4 1073 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 OR51T1Q8NGJ9 327 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 OR10K1Q8NGX5 313 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 OR1F12Q8NHA8 337 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 OR2V1Q8NHB1 315 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 GLYATL2Q8WU03 294 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 PCNPQ8WW12 178 aaKnown RBP4.37□□□□□ -1.71
SDC2-204ENST00000519914 MR1Q95460 341 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 FBXO17Q96EF6 278 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 SAT2Q96F10 170 aaPredicted RBP4.37□□□□□ -1.71
SDC2-204ENST00000519914 GALNT14Q96FL9 552 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 PFDN5Q99471 154 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 GPER1Q99527 375 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 SRXN1Q9BYN0 137 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 ULBP2Q9BZM5 246 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 LINC00470Q9BZP3 86 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 NKX6-2Q9C056 277 aaPredicted RBP4.37□□□□□ -1.71
SDC2-204ENST00000519914 BANF2Q9H503 90 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 NIT2Q9NQR4 276 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 TUBD1Q9UJT1 453 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 DKKL1Q9UK85 242 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 KCNIP3Q9Y2W7 256 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 RTTNQ86VV8 2226 aa4.37□□□□□ -1.71
SDC2-204ENST00000519914 SDK2Q58EX2 2172 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 hCG_38984A0A1B0GV85 526 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 OR5H15A6NDH6 313 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 CRYM-AS1A6NIL9 109 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 H7C1Q1 480 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 DNASE2O00115 360 aaPredicted RBP4.36□□□□□ -1.71
SDC2-204ENST00000519914 UBE2CO00762 179 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 CCSO14618 274 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 TNFSF11O14788 317 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 XRCC2O43543 280 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 CIDEAO60543 219 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 SS18L1O75177 396 aaPredicted RBP4.36□□□□□ -1.71
SDC2-204ENST00000519914 OPN1LWP04000 364 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms