RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 EGR4Q05215 589 aa10.31□□□□□ -0.76
SYNPO-204ENST00000519664 MIDNQ504T8 468 aa10.31□□□□□ -0.76
SYNPO-204ENST00000519664 PRAMEF5Q5TYX0 476 aa10.31□□□□□ -0.76
SYNPO-204ENST00000519664 PRAMEF6Q5VXH4 476 aa10.31□□□□□ -0.76
SYNPO-204ENST00000519664 LHX4Q969G2 390 aa10.31□□□□□ -0.76
SYNPO-204ENST00000519664 AKIRIN1Q9H9L7 192 aaPredicted RBP10.31□□□□□ -0.76
SYNPO-204ENST00000519664 A0A1W2PPC1 479 aa10.31□□□□□ -0.76
SYNPO-204ENST00000519664 PQLC2LA1A4F0 135 aa10.31□□□□□ -0.76
SYNPO-204ENST00000519664 DEFB108AA8MXU0 73 aa10.31□□□□□ -0.76
SYNPO-204ENST00000519664 AP4M1O00189 453 aa10.31□□□□□ -0.76
SYNPO-204ENST00000519664 GP1BAP07359 652 aa10.31□□□□□ -0.76
SYNPO-204ENST00000519664 NMBP08949 121 aa10.31□□□□□ -0.76
SYNPO-204ENST00000519664 CXCL2P19875 107 aa10.31□□□□□ -0.76
SYNPO-204ENST00000519664 MLF1P58340 268 aa10.31□□□□□ -0.76
SYNPO-204ENST00000519664 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.31□□□□□ -0.76
SYNPO-204ENST00000519664 WDR74Q6RFH5 385 aaPredicted RBP10.31□□□□□ -0.76
SYNPO-204ENST00000519664 PHYHIPLQ96FC7 376 aa10.31□□□□□ -0.76
SYNPO-204ENST00000519664 AP1S3Q96PC3 154 aa10.31□□□□□ -0.76
SYNPO-204ENST00000519664 B3GAT1Q9P2W7 334 aa10.31□□□□□ -0.76
SYNPO-204ENST00000519664 RALGAPA2Q2PPJ7 1873 aa10.31□□□□□ -0.76
SYNPO-204ENST00000519664 VWA8A3KMH1 1905 aa10.31□□□□□ -0.76
SYNPO-204ENST00000519664 SH2D1BO14796 132 aa10.31□□□□□ -0.76
SYNPO-204ENST00000519664 LY86O95711 162 aa10.31□□□□□ -0.76
SYNPO-204ENST00000519664 ARR3P36575 388 aa10.31□□□□□ -0.76
SYNPO-204ENST00000519664 KIAA2026Q5HYC2 2103 aa10.31□□□□□ -0.76
SYNPO-204ENST00000519664 MYO7BQ6PIF6 2116 aa10.31□□□□□ -0.76
SYNPO-204ENST00000519664 LURAP1LQ8IV03 231 aa10.31□□□□□ -0.76
SYNPO-204ENST00000519664 APOBEC3DQ96AK3 386 aaPredicted RBP10.31□□□□□ -0.76
SYNPO-204ENST00000519664 FBXL17Q9UF56 701 aa10.31□□□□□ -0.76
SYNPO-204ENST00000519664 POLDIP2Q9Y2S7 368 aa10.31□□□□□ -0.76
SYNPO-204ENST00000519664 MTCL1Q9Y4B5 1905 aaKnown RBP10.31□□□□□ -0.76
SYNPO-204ENST00000519664 RNASEK-C17orf49H0YIS7 233 aa10.31□□□□□ -0.76
SYNPO-204ENST00000519664 DXOO77932 396 aaKnown RBP10.31□□□□□ -0.76
SYNPO-204ENST00000519664 RAC3P60763 192 aa10.31□□□□□ -0.76
SYNPO-204ENST00000519664 RBMS3Q6XE24 437 aaKnown RBP10.31□□□□□ -0.76
SYNPO-204ENST00000519664 GPR160Q9UJ42 338 aa10.31□□□□□ -0.76
SYNPO-204ENST00000519664 CTXN2P0C2S0 81 aa10.3□□□□□ -0.76
SYNPO-204ENST00000519664 HTD2P86397 168 aa10.3□□□□□ -0.76
SYNPO-204ENST00000519664 PRDX4Q13162 271 aa10.3□□□□□ -0.76
SYNPO-204ENST00000519664 PIGYQ3MUY2 71 aa10.3□□□□□ -0.76
SYNPO-204ENST00000519664 SCCPDHQ8NBX0 429 aa10.3□□□□□ -0.76
SYNPO-204ENST00000519664 OR10D4PQ8NGN7 298 aa10.3□□□□□ -0.76
SYNPO-204ENST00000519664 MMP24Q9Y5R2 645 aa10.3□□□□□ -0.76
SYNPO-204ENST00000519664 FAM74A7A6NL05 159 aa10.3□□□□□ -0.76
SYNPO-204ENST00000519664 TSPAN2O60636 221 aa10.3□□□□□ -0.76
SYNPO-204ENST00000519664 CRHP06850 196 aa10.3□□□□□ -0.76
SYNPO-204ENST00000519664 HNF1AP20823 631 aa10.3□□□□□ -0.76
SYNPO-204ENST00000519664 TMEM33P57088 247 aa10.3□□□□□ -0.76
SYNPO-204ENST00000519664 FAM74A3Q4VXF1 159 aa10.3□□□□□ -0.76
SYNPO-204ENST00000519664 MESP1Q9BRJ9 268 aa10.3□□□□□ -0.76
SYNPO-204ENST00000519664 PECRQ9BY49 303 aa10.3□□□□□ -0.76
SYNPO-204ENST00000519664 KLK13Q9UKR3 277 aa10.3□□□□□ -0.76
SYNPO-204ENST00000519664 TCFL5Q9UL49 500 aa10.3□□□□□ -0.76
SYNPO-204ENST00000519664 A0A1B0GTQ1 180 aa10.3□□□□□ -0.76
SYNPO-204ENST00000519664 ABCD4O14678 606 aa10.3□□□□□ -0.76
SYNPO-204ENST00000519664 SCAND1P57086 179 aa10.3□□□□□ -0.76
SYNPO-204ENST00000519664 TUSC5Q8IXB3 177 aa10.3□□□□□ -0.76
SYNPO-204ENST00000519664 OR2M3Q8NG83 312 aa10.3□□□□□ -0.76
SYNPO-204ENST00000519664 OR10V1Q8NGI7 309 aa10.3□□□□□ -0.76
SYNPO-204ENST00000519664 MITD1Q8WV92 249 aa10.3□□□□□ -0.76
SYNPO-204ENST00000519664 VSIG4Q9Y279 399 aa10.3□□□□□ -0.76
SYNPO-204ENST00000519664 MPDZO75970 2070 aa10.3□□□□□ -0.76
SYNPO-204ENST00000519664 A0A087X0M5 115 aa10.29□□□□□ -0.76
SYNPO-204ENST00000519664 TRGV5A0A0B4J1U4 118 aa10.29□□□□□ -0.76
SYNPO-204ENST00000519664 A0A0B4J293 547 aa10.29□□□□□ -0.76
SYNPO-204ENST00000519664 A0A0J9YW62 118 aa10.29□□□□□ -0.76
SYNPO-204ENST00000519664 A0A1B0GX30 115 aa10.29□□□□□ -0.76
SYNPO-204ENST00000519664 KLF4O43474 513 aa10.29□□□□□ -0.76
SYNPO-204ENST00000519664 GDF9O60383 454 aa10.29□□□□□ -0.76
SYNPO-204ENST00000519664 TIAF1O95411 115 aa10.29□□□□□ -0.76
SYNPO-204ENST00000519664 RPS4Y1P22090 263 aaKnown RBP10.29□□□□□ -0.76
SYNPO-204ENST00000519664 GGTLC2Q14390 218 aa10.29□□□□□ -0.76
SYNPO-204ENST00000519664 FAM173AQ9BQD7 235 aa10.29□□□□□ -0.76
SYNPO-204ENST00000519664 ZNF727A8MUV8 499 aa10.29□□□□□ -0.76
SYNPO-204ENST00000519664 ADAM20O43506 726 aa10.29□□□□□ -0.76
SYNPO-204ENST00000519664 PDCD6O75340 191 aa10.29□□□□□ -0.76
SYNPO-204ENST00000519664 F12P00748 615 aaPredicted RBP10.29□□□□□ -0.76
SYNPO-204ENST00000519664 DAOP14920 347 aa10.29□□□□□ -0.76
SYNPO-204ENST00000519664 FGF7P21781 194 aa10.29□□□□□ -0.76
SYNPO-204ENST00000519664 SPEM2Q0P670 501 aa10.29□□□□□ -0.76
SYNPO-204ENST00000519664 PJVKQ0ZLH3 352 aa10.29□□□□□ -0.76
SYNPO-204ENST00000519664 ZNF239Q16600 458 aaKnown RBP10.29□□□□□ -0.76
SYNPO-204ENST00000519664 TAAR9Q96RI9 348 aa10.29□□□□□ -0.76
SYNPO-204ENST00000519664 ADAM19Q9H013 955 aa10.29□□□□□ -0.76
SYNPO-204ENST00000519664 ANXA10Q9UJ72 324 aa10.29□□□□□ -0.76
SYNPO-204ENST00000519664 SFTA3P0C7M3 94 aa10.29□□□□□ -0.76
SYNPO-204ENST00000519664 C1orf210Q8IVY1 113 aa10.29□□□□□ -0.76
SYNPO-204ENST00000519664 ADIPOR1Q96A54 375 aa10.29□□□□□ -0.76
SYNPO-204ENST00000519664 ADAT1Q9BUB4 502 aaKnown RBP10.29□□□□□ -0.76
SYNPO-204ENST00000519664 PATZ1Q9HBE1 687 aaKnown RBP10.29□□□□□ -0.76
SYNPO-204ENST00000519664 RAB18Q9NP72 206 aa10.29□□□□□ -0.76
SYNPO-204ENST00000519664 MED9Q9NWA0 146 aa10.29□□□□□ -0.76
SYNPO-204ENST00000519664 AQP7O14520 342 aa10.29□□□□□ -0.76
SYNPO-204ENST00000519664 CRYAAP02489 173 aa10.29□□□□□ -0.76
SYNPO-204ENST00000519664 SRD5A2P31213 254 aa10.29□□□□□ -0.76
SYNPO-204ENST00000519664 RPP30P78346 268 aaKnown RBP10.29□□□□□ -0.76
SYNPO-204ENST00000519664 PLPPR5Q32ZL2 321 aa10.29□□□□□ -0.76
SYNPO-204ENST00000519664 TMEM255AQ5JRV8 349 aa10.29□□□□□ -0.76
SYNPO-204ENST00000519664 OR5C1Q8NGR4 320 aa10.29□□□□□ -0.76
SYNPO-204ENST00000519664 MRPL24Q96A35 216 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms