RNA–Protein interactions for RNA: ENST00000519599.1

IGKV3D-25-201, Transcript of immunoglobulin kappa variable 3D-25 (pseudogene), humanhuman

BASIC

Gene IGKV3D-25, Length 235 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-25-201ENST00000519599 CHST6Q9GZX3 395 aa4.94□□□□□ -1.62
IGKV3D-25-201ENST00000519599 COMMD4Q9H0A8 199 aa4.94□□□□□ -1.62
IGKV3D-25-201ENST00000519599 RANBP3Q9H6Z4 567 aaPredicted RBP4.94□□□□□ -1.62
IGKV3D-25-201ENST00000519599 ZNF581Q9P0T4 197 aa4.94□□□□□ -1.62
IGKV3D-25-201ENST00000519599 GNG8Q9UK08 70 aa4.94□□□□□ -1.62
IGKV3D-25-201ENST00000519599 GTF2A1LQ9UNN4 478 aa4.94□□□□□ -1.62
IGKV3D-25-201ENST00000519599 POLDIP2Q9Y2S7 368 aa4.94□□□□□ -1.62
IGKV3D-25-201ENST00000519599 SF3B6Q9Y3B4 125 aaKnown RBP4.94□□□□□ -1.62
IGKV3D-25-201ENST00000519599 FAM96BQ9Y3D0 163 aa4.94□□□□□ -1.62
IGKV3D-25-201ENST00000519599 LY6LH3BQJ8 138 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 SLC1A7O00341 560 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 TIMM23O14925 209 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 WBP4O75554 376 aaKnown RBP4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 ATP5HO75947 161 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 INMTO95050 263 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 ZFPL1O95159 310 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 LALBAP00709 142 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 IGLV1-47P01700 117 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 MT-ND2P03891 347 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 AMY1AP04745 511 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 AMY2AP04746 511 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 CHRM2P08172 466 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 UBCP0CG48 685 aaKnown RBP4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 LIMS3P0CW19 117 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 LIMS4P0CW20 117 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 DBTP11182 482 aaKnown RBP4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 DYNLT3P51808 116 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 CAPZA1P52907 286 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 BLCAPP62952 87 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 PDZK1IP1Q13113 114 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 IL18R1Q13478 541 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 ALKBH1Q13686 389 aaKnown RBP4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 HERPUD1Q15011 391 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 SMN1Q16637 294 aaKnown RBP4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 C17orf58Q2M2W7 97 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 BEAN1Q3B7T3 259 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 TMEM95Q3KNT9 176 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 TCTEX1D4Q5JR98 221 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 SAMD5Q5TGI4 173 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 LAIR2Q6ISS4 152 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 LHFPL3Q86UP9 236 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 TMEM219Q86XT9 240 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 C1QL4Q86Z23 238 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 EGFL6Q8IUX8 553 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 CBR4Q8N4T8 237 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 KLHDC1Q8N7A1 406 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 ZNF485Q8NCK3 441 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 CCDC54Q8NEL0 328 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 Q8NFD4 153 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 OR51A2Q8NGJ7 313 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 RHOXF1Q8NHV9 184 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 PP6455Q8WZ26 134 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 EMG1Q92979 244 aaKnown RBP4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 RFT1Q96AA3 541 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 FGGYQ96C11 551 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 C4orf36Q96KX1 117 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 ZNF714Q96N38 554 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 OPALINQ96PE5 141 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 NKX3-1Q99801 234 aaPredicted RBP4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 OCSTAMPQ9BR26 566 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 CDCA4Q9BXL8 241 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 PPIL3Q9H2H8 161 aaKnown RBP4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 TCF7L1Q9HCS4 588 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 HMG20AQ9NP66 347 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 AMBNQ9NP70 447 aa4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 MRPS18AQ9NVS2 196 aaKnown RBP4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 H2AFY2Q9P0M6 372 aaPredicted RBP4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 CAB39Q9Y376 341 aaPredicted RBP4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 TBL2Q9Y4P3 447 aaKnown RBP4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 SIRT4Q9Y6E7 314 aaPredicted RBP4.93□□□□□ -1.62
IGKV3D-25-201ENST00000519599 A0A087X0M5 115 aa4.92□□□□□ -1.62
IGKV3D-25-201ENST00000519599 IGHV2-26A0A0B4J1V2 119 aa4.92□□□□□ -1.62
IGKV3D-25-201ENST00000519599 A0A1B0GX30 115 aa4.92□□□□□ -1.62
IGKV3D-25-201ENST00000519599 G3V4G9 280 aa4.92□□□□□ -1.62
IGKV3D-25-201ENST00000519599 M0QZ24 198 aa4.92□□□□□ -1.62
IGKV3D-25-201ENST00000519599 SIRPB1O00241 398 aa4.92□□□□□ -1.62
IGKV3D-25-201ENST00000519599 SLC33A1O00400 549 aaPredicted RBP4.92□□□□□ -1.62
IGKV3D-25-201ENST00000519599 GATBO75879 557 aaKnown RBP4.92□□□□□ -1.62
IGKV3D-25-201ENST00000519599 ALX3O95076 343 aa4.92□□□□□ -1.62
IGKV3D-25-201ENST00000519599 OR2H2O95918 312 aa4.92□□□□□ -1.62
IGKV3D-25-201ENST00000519599 PAHP00439 452 aa4.92□□□□□ -1.62
IGKV3D-25-201ENST00000519599 ARG1P05089 322 aa4.92□□□□□ -1.62
IGKV3D-25-201ENST00000519599 CSN2P05814 226 aa4.92□□□□□ -1.62
IGKV3D-25-201ENST00000519599 CD28P10747 220 aa4.92□□□□□ -1.62
IGKV3D-25-201ENST00000519599 CD34P28906 385 aa4.92□□□□□ -1.62
IGKV3D-25-201ENST00000519599 ERP29P30040 261 aaKnown RBP4.92□□□□□ -1.62
IGKV3D-25-201ENST00000519599 GABRA5P31644 462 aa4.92□□□□□ -1.62
IGKV3D-25-201ENST00000519599 GLIPR1P48060 266 aa4.92□□□□□ -1.62
IGKV3D-25-201ENST00000519599 POU3F4P49335 361 aa4.92□□□□□ -1.62
IGKV3D-25-201ENST00000519599 RBP2P50120 134 aa4.92□□□□□ -1.62
IGKV3D-25-201ENST00000519599 RASSF2P50749 326 aa4.92□□□□□ -1.62
IGKV3D-25-201ENST00000519599 GTF2A1P52655 376 aaPredicted RBP4.92□□□□□ -1.62
IGKV3D-25-201ENST00000519599 P2RX3P56373 397 aa4.92□□□□□ -1.62
IGKV3D-25-201ENST00000519599 EDDM3BP56851 147 aa4.92□□□□□ -1.62
IGKV3D-25-201ENST00000519599 ACTA2P62736 377 aa4.92□□□□□ -1.62
IGKV3D-25-201ENST00000519599 ACTG2P63267 376 aa4.92□□□□□ -1.62
IGKV3D-25-201ENST00000519599 ACTC1P68032 377 aa4.92□□□□□ -1.62
IGKV3D-25-201ENST00000519599 ACTA1P68133 377 aa4.92□□□□□ -1.62
IGKV3D-25-201ENST00000519599 MEF2CQ06413 473 aaPredicted RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms