RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 RAB22AQ9UL26 194 aa11.86□□□□□ -0.51
SDC2-203ENST00000519587 WIPI2Q9Y4P8 454 aa11.86□□□□□ -0.51
SDC2-203ENST00000519587 OR2AT4A6NND4 320 aa11.85□□□□□ -0.51
SDC2-203ENST00000519587 TMEM14DPA8MWL7 114 aa11.85□□□□□ -0.51
SDC2-203ENST00000519587 SH2D1BO14796 132 aa11.85□□□□□ -0.51
SDC2-203ENST00000519587 SCGNO76038 276 aa11.85□□□□□ -0.51
SDC2-203ENST00000519587 SNRPBP14678 240 aaKnown RBP11.85□□□□□ -0.51
SDC2-203ENST00000519587 IKZF1Q13422 519 aa11.85□□□□□ -0.51
SDC2-203ENST00000519587 ZNF146Q15072 292 aa11.85□□□□□ -0.51
SDC2-203ENST00000519587 MPV17LQ2QL34 196 aa11.85□□□□□ -0.51
SDC2-203ENST00000519587 C2orf76Q3KRA6 126 aa11.85□□□□□ -0.51
SDC2-203ENST00000519587 AVPI1Q5T686 147 aa11.85□□□□□ -0.51
SDC2-203ENST00000519587 FOXB2Q5VYV0 432 aa11.85□□□□□ -0.51
SDC2-203ENST00000519587 STUMQ69YW2 141 aa11.85□□□□□ -0.51
SDC2-203ENST00000519587 SFRP4Q6FHJ7 346 aaPredicted RBP11.85□□□□□ -0.51
SDC2-203ENST00000519587 DCDC5Q6ZRR9 648 aa11.85□□□□□ -0.51
SDC2-203ENST00000519587 NLRC3Q7RTR2 1065 aa11.85□□□□□ -0.51
SDC2-203ENST00000519587 CHST4Q8NCG5 386 aa11.85□□□□□ -0.51
SDC2-203ENST00000519587 DEFB108BQ8NET1 73 aa11.85□□□□□ -0.51
SDC2-203ENST00000519587 OR51T1Q8NGJ9 327 aa11.85□□□□□ -0.51
SDC2-203ENST00000519587 BARHL1Q9BZE3 327 aa11.85□□□□□ -0.51
SDC2-203ENST00000519587 SELENOIQ9C0D9 397 aa11.85□□□□□ -0.51
SDC2-203ENST00000519587 SPACA1Q9HBV2 294 aa11.85□□□□□ -0.51
SDC2-203ENST00000519587 OR14J1Q9UGF5 321 aa11.85□□□□□ -0.51
SDC2-203ENST00000519587 OR5V1Q9UGF6 321 aa11.85□□□□□ -0.51
SDC2-203ENST00000519587 PCDHB10Q9UN67 800 aa11.85□□□□□ -0.51
SDC2-203ENST00000519587 ST3GAL6Q9Y274 331 aa11.85□□□□□ -0.51
SDC2-203ENST00000519587 IGHV3OR15-7A0A075B7D8 119 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 A0A0B4J203 849 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 TMEM272A0A1B0GTI8 110 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 METTL21EPA6NDL7 271 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 FAM90A10PA6NDY2 464 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 FAM90A18PA6NE21 464 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 FAM90A16PA6NEW6 464 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 FAM90A20PA6NIJ5 464 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 FAM90A8PA6NJQ4 464 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 FAM90A7PA6NKC0 464 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 FAM90A22PA8MWA6 464 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 FAM90A12PA8MX19 464 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 FAM90A5PA8MXJ8 464 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 FAM90A23PA8MXZ1 464 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 F8VVB4 439 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 F8VWA3 439 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 ZNF205O95201 554 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 HAND1O96004 215 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 HEXAP06865 529 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 FAM90A15PP0C7V4 464 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 FAM90A13PP0C7W8 464 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 FAM90A14PP0C7W9 464 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 FAM90A24PP0C7X0 464 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 NR4A2P43354 598 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 ART1P52961 327 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 SNU13P55769 128 aaKnown RBP11.84□□□□□ -0.51
SDC2-203ENST00000519587 RPS27AP62979 156 aaKnown RBP11.84□□□□□ -0.51
SDC2-203ENST00000519587 QRFPP83859 136 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 UNC119Q13432 240 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 PIGYQ3MUY2 71 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 UBE2NLQ5JXB2 153 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 FAM201AQ5SY85 155 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 SLC36A1Q7Z2H8 476 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 LRRC28Q86X40 367 aaPredicted RBP11.84□□□□□ -0.51
SDC2-203ENST00000519587 TMEM104Q8NE00 496 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 PHF21AQ96BD5 680 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 RAB39BQ96DA2 213 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 Q96M66 194 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 BPESC1Q9GZL8 116 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 KCNK15Q9H427 330 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 BANF2Q9H503 90 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 SEBOXQ9HB31 216 aaPredicted RBP11.84□□□□□ -0.51
SDC2-203ENST00000519587 SPATA2Q9UM82 520 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 ABCA2Q9BZC7 2435 aa11.84□□□□□ -0.51
SDC2-203ENST00000519587 DNHD1Q96M86 4753 aa11.83□□□□□ -0.52
SDC2-203ENST00000519587 RFPL4AA6NLU0 287 aa11.83□□□□□ -0.52
SDC2-203ENST00000519587 RFPL4AL1F8VTS6 287 aa11.83□□□□□ -0.52
SDC2-203ENST00000519587 LDLRAD4O15165 306 aa11.83□□□□□ -0.52
SDC2-203ENST00000519587 OR7C1O76099 320 aaPredicted RBP11.83□□□□□ -0.52
SDC2-203ENST00000519587 GYPAP02724 150 aa11.83□□□□□ -0.52
SDC2-203ENST00000519587 PSG2P11465 335 aa11.83□□□□□ -0.52
SDC2-203ENST00000519587 ZNF44P15621 663 aa11.83□□□□□ -0.52
SDC2-203ENST00000519587 RPS2P15880 293 aaKnown RBP11.83□□□□□ -0.52
SDC2-203ENST00000519587 GABRA2P47869 451 aa11.83□□□□□ -0.52
SDC2-203ENST00000519587 IL13RA1P78552 427 aa11.83□□□□□ -0.52
SDC2-203ENST00000519587 OR10K2Q6IF99 312 aa11.83□□□□□ -0.52
SDC2-203ENST00000519587 SPNS3Q6ZMD2 512 aa11.83□□□□□ -0.52
SDC2-203ENST00000519587 DNM1P46Q6ZS02 220 aa11.83□□□□□ -0.52
SDC2-203ENST00000519587 SAMD12Q8N8I0 201 aa11.83□□□□□ -0.52
SDC2-203ENST00000519587 C19orf18Q8NEA5 215 aa11.83□□□□□ -0.52
SDC2-203ENST00000519587 MCFD2Q8NI22 146 aa11.83□□□□□ -0.52
SDC2-203ENST00000519587 ANGPTL6Q8NI99 470 aa11.83□□□□□ -0.52
SDC2-203ENST00000519587 PPP1R35Q8TAP8 253 aa11.83□□□□□ -0.52
SDC2-203ENST00000519587 MED30Q96HR3 178 aa11.83□□□□□ -0.52
SDC2-203ENST00000519587 TMEM246Q9BRR3 403 aa11.83□□□□□ -0.52
SDC2-203ENST00000519587 TM2D1Q9BX74 207 aa11.83□□□□□ -0.52
SDC2-203ENST00000519587 ZNF665Q9H7R5 613 aa11.83□□□□□ -0.52
SDC2-203ENST00000519587 RHBDL2Q9NX52 303 aa11.83□□□□□ -0.52
SDC2-203ENST00000519587 IL36RNQ9UBH0 155 aa11.83□□□□□ -0.52
SDC2-203ENST00000519587 MIOXQ9UGB7 285 aa11.83□□□□□ -0.52
SDC2-203ENST00000519587 ADAM30Q9UKF2 790 aa11.83□□□□□ -0.52
SDC2-203ENST00000519587 NAV3Q8IVL0 2385 aa11.83□□□□□ -0.52
SDC2-203ENST00000519587 NIPBLQ6KC79 2804 aaeCLIP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms