RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 UBA3Q8TBC4 463 aa2.42□□□□□ -2.02
PTPN12-213ENST00000519553 METTL26Q96S19 204 aa2.42□□□□□ -2.02
PTPN12-213ENST00000519553 FBXO44Q9H4M3 255 aa2.42□□□□□ -2.02
PTPN12-213ENST00000519553 PLXNB3Q9ULL4 1909 aa2.42□□□□□ -2.02
PTPN12-213ENST00000519553 KIF27Q86VH2 1401 aa2.42□□□□□ -2.02
PTPN12-213ENST00000519553 ZNF729A6NN14 1252 aaPredicted RBP2.41□□□□□ -2.02
PTPN12-213ENST00000519553 GGTLC3B5MD39 225 aa2.41□□□□□ -2.02
PTPN12-213ENST00000519553 POLR3GO15318 223 aaPredicted RBP2.41□□□□□ -2.02
PTPN12-213ENST00000519553 ALOX12BO75342 701 aa2.41□□□□□ -2.02
PTPN12-213ENST00000519553 SNAI1O95863 264 aaPredicted RBP2.41□□□□□ -2.02
PTPN12-213ENST00000519553 PTHLHP12272 177 aa2.41□□□□□ -2.02
PTPN12-213ENST00000519553 ZNF708P17019 499 aa2.41□□□□□ -2.02
PTPN12-213ENST00000519553 IFFO1Q0D2I5 559 aa2.41□□□□□ -2.02
PTPN12-213ENST00000519553 DUPD1Q68J44 220 aa2.41□□□□□ -2.02
PTPN12-213ENST00000519553 AMN1Q8IY45 258 aa2.41□□□□□ -2.02
PTPN12-213ENST00000519553 OR8A1Q8NGG7 326 aa2.41□□□□□ -2.02
PTPN12-213ENST00000519553 OR51L1Q8NGJ5 315 aa2.41□□□□□ -2.02
PTPN12-213ENST00000519553 CENPNQ96H22 339 aaPredicted RBP2.41□□□□□ -2.02
PTPN12-213ENST00000519553 SRRQ9GZT4 340 aa2.41□□□□□ -2.02
PTPN12-213ENST00000519553 HAUS4Q9H6D7 363 aa2.41□□□□□ -2.02
PTPN12-213ENST00000519553 ACOT9Q9Y305 439 aa2.41□□□□□ -2.02
PTPN12-213ENST00000519553 TRAPPC1Q9Y5R8 145 aa2.41□□□□□ -2.02
PTPN12-213ENST00000519553 SPATA31E1Q6ZUB1 1445 aa2.41□□□□□ -2.02
PTPN12-213ENST00000519553 IGHV3-43A0A0B4J1X8 118 aa2.4□□□□□ -2.03
PTPN12-213ENST00000519553 A0A0J9YYE9 177 aa2.4□□□□□ -2.03
PTPN12-213ENST00000519553 SYNGR2O43760 224 aa2.4□□□□□ -2.03
PTPN12-213ENST00000519553 GMDSO60547 372 aa2.4□□□□□ -2.03
PTPN12-213ENST00000519553 TRBC1P01850 177 aa2.4□□□□□ -2.03
PTPN12-213ENST00000519553 HTR2BP41595 481 aa2.4□□□□□ -2.03
PTPN12-213ENST00000519553 SSX1Q16384 188 aa2.4□□□□□ -2.03
PTPN12-213ENST00000519553 NDUFAF6Q330K2 333 aa2.4□□□□□ -2.03
PTPN12-213ENST00000519553 ZFP82Q8N141 532 aa2.4□□□□□ -2.03
PTPN12-213ENST00000519553 PHOSPHO2Q8TCD6 241 aa2.4□□□□□ -2.03
PTPN12-213ENST00000519553 LRRC39Q96DD0 335 aa2.4□□□□□ -2.03
PTPN12-213ENST00000519553 RILPQ96NA2 401 aa2.4□□□□□ -2.03
PTPN12-213ENST00000519553 RAB23Q9ULC3 237 aa2.4□□□□□ -2.03
PTPN12-213ENST00000519553 ZNF443Q9Y2A4 671 aaPredicted RBP2.4□□□□□ -2.03
PTPN12-213ENST00000519553 ZNF706Q9Y5V0 76 aaPredicted RBP2.4□□□□□ -2.03
PTPN12-213ENST00000519553 ZNF780BQ9Y6R6 833 aa2.4□□□□□ -2.03
PTPN12-213ENST00000519553 VWA8A3KMH1 1905 aa2.39□□□□□ -2.03
PTPN12-213ENST00000519553 IGHV3-21A0A0B4J1V1 117 aa2.39□□□□□ -2.03
PTPN12-213ENST00000519553 LOC389332A0A1B0GUA5 103 aa2.39□□□□□ -2.03
PTPN12-213ENST00000519553 ANKRD20A5PA0PJZ0 165 aa2.39□□□□□ -2.03
PTPN12-213ENST00000519553 ZNF879B4DU55 563 aa2.39□□□□□ -2.03
PTPN12-213ENST00000519553 ANP32AP39687 249 aaKnown RBP2.39□□□□□ -2.03
PTPN12-213ENST00000519553 PSMD8P48556 350 aa2.39□□□□□ -2.03
PTPN12-213ENST00000519553 DYNC1I2Q13409 638 aaKnown RBP2.39□□□□□ -2.03
PTPN12-213ENST00000519553 WDR43Q15061 677 aaKnown RBP eCLIP2.39□□□□□ -2.03
PTPN12-213ENST00000519553 TMEM241Q24JQ0 296 aa2.39□□□□□ -2.03
PTPN12-213ENST00000519553 LGALSLQ3ZCW2 172 aaPredicted RBP2.39□□□□□ -2.03
PTPN12-213ENST00000519553 SYT6Q5T7P8 510 aaPredicted RBP2.39□□□□□ -2.03
PTPN12-213ENST00000519553 LYPD6Q86Y78 171 aa2.39□□□□□ -2.03
PTPN12-213ENST00000519553 ARHGAP18Q8N392 663 aa2.39□□□□□ -2.03
PTPN12-213ENST00000519553 MITD1Q8WV92 249 aa2.39□□□□□ -2.03
PTPN12-213ENST00000519553 QKIQ96PU8 341 aaKnown RBP eCLIP2.39□□□□□ -2.03
PTPN12-213ENST00000519553 STACQ99469 402 aa2.39□□□□□ -2.03
PTPN12-213ENST00000519553 SIKE1Q9BRV8 207 aa2.39□□□□□ -2.03
PTPN12-213ENST00000519553 SLC38A1Q9H2H9 487 aa2.39□□□□□ -2.03
PTPN12-213ENST00000519553 TXNIPQ9H3M7 391 aa2.39□□□□□ -2.03
PTPN12-213ENST00000519553 LZTFL1Q9NQ48 299 aa2.39□□□□□ -2.03
PTPN12-213ENST00000519553 DYSFO75923 2080 aa2.38□□□□□ -2.03
PTPN12-213ENST00000519553 TRAV8-7A0A075B6U6 113 aa2.38□□□□□ -2.03
PTPN12-213ENST00000519553 A0A1W2PNM2 257 aa2.38□□□□□ -2.03
PTPN12-213ENST00000519553 RGS5O15539 181 aa2.38□□□□□ -2.03
PTPN12-213ENST00000519553 GATCO43716 136 aaKnown RBP2.38□□□□□ -2.03
PTPN12-213ENST00000519553 SLC37A4O43826 429 aa2.38□□□□□ -2.03
PTPN12-213ENST00000519553 CSTAP01040 98 aa2.38□□□□□ -2.03
PTPN12-213ENST00000519553 NPPAP01160 153 aa2.38□□□□□ -2.03
PTPN12-213ENST00000519553 IGKV1D-33P01593 117 aa2.38□□□□□ -2.03
PTPN12-213ENST00000519553 IGKV1-33P01594 117 aa2.38□□□□□ -2.03
PTPN12-213ENST00000519553 IMPA1P29218 277 aa2.38□□□□□ -2.03
PTPN12-213ENST00000519553 NUP62P37198 522 aaPredicted RBP2.38□□□□□ -2.03
PTPN12-213ENST00000519553 TAL2Q16559 108 aa2.38□□□□□ -2.03
PTPN12-213ENST00000519553 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
PTPN12-213ENST00000519553 IDNKQ5T6J7 187 aa2.38□□□□□ -2.03
PTPN12-213ENST00000519553 NELFCDQ8IXH7 590 aa2.38□□□□□ -2.03
PTPN12-213ENST00000519553 CPNE9Q8IYJ1 553 aa2.38□□□□□ -2.03
PTPN12-213ENST00000519553 CA13Q8N1Q1 262 aa2.38□□□□□ -2.03
PTPN12-213ENST00000519553 C3orf22Q8N5N4 141 aa2.38□□□□□ -2.03
PTPN12-213ENST00000519553 CIDECQ96AQ7 238 aaPredicted RBP2.38□□□□□ -2.03
PTPN12-213ENST00000519553 C12orf4Q9NQ89 552 aa2.38□□□□□ -2.03
PTPN12-213ENST00000519553 STK38LQ9Y2H1 464 aa2.38□□□□□ -2.03
PTPN12-213ENST00000519553 AP3M1Q9Y2T2 418 aa2.38□□□□□ -2.03
PTPN12-213ENST00000519553 NOSIPQ9Y314 301 aaKnown RBP2.38□□□□□ -2.03
PTPN12-213ENST00000519553 MAP3K19Q56UN5 1328 aa2.38□□□□□ -2.03
PTPN12-213ENST00000519553 A0A1W2PPV4 95 aa2.37□□□□□ -2.03
PTPN12-213ENST00000519553 OR2AT4A6NND4 320 aa2.37□□□□□ -2.03
PTPN12-213ENST00000519553 A8MWP4 228 aa2.37□□□□□ -2.03
PTPN12-213ENST00000519553 SEC14L6B5MCN3 397 aa2.37□□□□□ -2.03
PTPN12-213ENST00000519553 ZNF593O00488 134 aaPredicted RBP2.37□□□□□ -2.03
PTPN12-213ENST00000519553 YKT6O15498 198 aa2.37□□□□□ -2.03
PTPN12-213ENST00000519553 CCDC172P0C7W6 258 aa2.37□□□□□ -2.03
PTPN12-213ENST00000519553 CGB3P0DN86 165 aa2.37□□□□□ -2.03
PTPN12-213ENST00000519553 CGB7P0DN87 165 aa2.37□□□□□ -2.03
PTPN12-213ENST00000519553 LIPCP11150 499 aa2.37□□□□□ -2.03
PTPN12-213ENST00000519553 Q6ZQT7 251 aa2.37□□□□□ -2.03
PTPN12-213ENST00000519553 LINC00596Q86U02 117 aa2.37□□□□□ -2.03
PTPN12-213ENST00000519553 GAPTQ8N292 157 aa2.37□□□□□ -2.03
PTPN12-213ENST00000519553 MNS1Q8NEH6 495 aa2.37□□□□□ -2.03
PTPN12-213ENST00000519553 OR4A15Q8NGL6 344 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms