RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 ZNF665Q9H7R5 613 aa11.84□□□□□ -0.51
PABPC1-208ENST00000519004 RRAGCQ9HB90 399 aa11.84□□□□□ -0.51
PABPC1-208ENST00000519004 MRPS28Q9Y2Q9 187 aaKnown RBP11.84□□□□□ -0.51
PABPC1-208ENST00000519004 SLC16A7O60669 478 aa11.84□□□□□ -0.51
PABPC1-208ENST00000519004 DDAH2O95865 285 aa11.84□□□□□ -0.51
PABPC1-208ENST00000519004 OMGP23515 440 aa11.84□□□□□ -0.51
PABPC1-208ENST00000519004 CDCP2Q5VXM1 449 aa11.84□□□□□ -0.51
PABPC1-208ENST00000519004 DPPA3Q6W0C5 159 aa11.84□□□□□ -0.51
PABPC1-208ENST00000519004 NPAS4Q8IUM7 802 aa11.84□□□□□ -0.51
PABPC1-208ENST00000519004 CISD2Q8N5K1 135 aaKnown RBP11.84□□□□□ -0.51
PABPC1-208ENST00000519004 OR4D5Q8NGN0 318 aa11.84□□□□□ -0.51
PABPC1-208ENST00000519004 GNPNAT1Q96EK6 184 aaPredicted RBP11.84□□□□□ -0.51
PABPC1-208ENST00000519004 GABRG3Q99928 467 aa11.84□□□□□ -0.51
PABPC1-208ENST00000519004 TMEM59Q9BXS4 323 aa11.84□□□□□ -0.51
PABPC1-208ENST00000519004 FOXQ1Q9C009 403 aa11.84□□□□□ -0.51
PABPC1-208ENST00000519004 H7BYZ3 331 aa11.83□□□□□ -0.52
PABPC1-208ENST00000519004 M0QZ24 198 aa11.83□□□□□ -0.52
PABPC1-208ENST00000519004 SELPP16109 830 aa11.83□□□□□ -0.52
PABPC1-208ENST00000519004 OR3A4PP47883 348 aa11.83□□□□□ -0.52
PABPC1-208ENST00000519004 PIGPP57054 158 aa11.83□□□□□ -0.52
PABPC1-208ENST00000519004 UBE2NP61088 152 aaKnown RBP11.83□□□□□ -0.52
PABPC1-208ENST00000519004 GNMTQ14749 295 aa11.83□□□□□ -0.52
PABPC1-208ENST00000519004 DGAT2L6Q6ZPD8 337 aa11.83□□□□□ -0.52
PABPC1-208ENST00000519004 LRTM2Q8N967 370 aa11.83□□□□□ -0.52
PABPC1-208ENST00000519004 KCNE4Q8WWG9 221 aa11.83□□□□□ -0.52
PABPC1-208ENST00000519004 DAZLQ92904 295 aaKnown RBP11.83□□□□□ -0.52
PABPC1-208ENST00000519004 CTHRC1Q96CG8 243 aa11.83□□□□□ -0.52
PABPC1-208ENST00000519004 COX14Q96I36 57 aa11.83□□□□□ -0.52
PABPC1-208ENST00000519004 NAA60Q9H7X0 242 aa11.83□□□□□ -0.52
PABPC1-208ENST00000519004 DECR2Q9NUI1 292 aa11.83□□□□□ -0.52
PABPC1-208ENST00000519004 NAT8Q9UHE5 227 aa11.83□□□□□ -0.52
PABPC1-208ENST00000519004 HIDE1A8MVS5 230 aa11.82□□□□□ -0.52
PABPC1-208ENST00000519004 TRAPPC6AO75865 159 aa11.82□□□□□ -0.52
PABPC1-208ENST00000519004 OR2J2O76002 312 aa11.82□□□□□ -0.52
PABPC1-208ENST00000519004 MPZL1O95297 269 aa11.82□□□□□ -0.52
PABPC1-208ENST00000519004 CTLA4P16410 223 aa11.82□□□□□ -0.52
PABPC1-208ENST00000519004 MTCP1P56278 107 aa11.82□□□□□ -0.52
PABPC1-208ENST00000519004 CST9LP1Q5W188 147 aa11.82□□□□□ -0.52
PABPC1-208ENST00000519004 Q6ZVH6 145 aa11.82□□□□□ -0.52
PABPC1-208ENST00000519004 NUP54Q7Z3B4 507 aa11.82□□□□□ -0.52
PABPC1-208ENST00000519004 TMEFF1Q8IYR6 380 aa11.82□□□□□ -0.52
PABPC1-208ENST00000519004 LGI3Q8N145 548 aa11.82□□□□□ -0.52
PABPC1-208ENST00000519004 KCNG3Q8TAE7 436 aa11.82□□□□□ -0.52
PABPC1-208ENST00000519004 ADAMTS18Q8TE60 1221 aa11.82□□□□□ -0.52
PABPC1-208ENST00000519004 TBL1XR1Q9BZK7 514 aa11.82□□□□□ -0.52
PABPC1-208ENST00000519004 CSTL1Q9H114 145 aa11.82□□□□□ -0.52
PABPC1-208ENST00000519004 PRSS50Q9UI38 385 aa11.82□□□□□ -0.52
PABPC1-208ENST00000519004 COL4A2P08572 1712 aa11.82□□□□□ -0.52
PABPC1-208ENST00000519004 PRSS37A4D1T9 235 aa11.82□□□□□ -0.52
PABPC1-208ENST00000519004 SERINC4A6NH21 518 aa11.82□□□□□ -0.52
PABPC1-208ENST00000519004 NRG2O14511 850 aaPredicted RBP11.82□□□□□ -0.52
PABPC1-208ENST00000519004 HPNP05981 417 aa11.82□□□□□ -0.52
PABPC1-208ENST00000519004 CDKN1AP38936 164 aa11.82□□□□□ -0.52
PABPC1-208ENST00000519004 CYP2G1PQ6ZSU1 146 aa11.82□□□□□ -0.52
PABPC1-208ENST00000519004 ODF3L1Q8IXM7 274 aa11.82□□□□□ -0.52
PABPC1-208ENST00000519004 H1FOOQ8IZA3 346 aaPredicted RBP11.82□□□□□ -0.52
PABPC1-208ENST00000519004 OR5C1Q8NGR4 320 aa11.82□□□□□ -0.52
PABPC1-208ENST00000519004 P2RX4Q99571 388 aa11.82□□□□□ -0.52
PABPC1-208ENST00000519004 CTSBP07858 339 aa11.81□□□□□ -0.52
PABPC1-208ENST00000519004 SMIM10L1P0DMW3 83 aa11.81□□□□□ -0.52
PABPC1-208ENST00000519004 PNMTP11086 282 aa11.81□□□□□ -0.52
PABPC1-208ENST00000519004 TCN2P20062 427 aa11.81□□□□□ -0.52
PABPC1-208ENST00000519004 EPHA8P29322 1005 aaPredicted RBP11.81□□□□□ -0.52
PABPC1-208ENST00000519004 GCH1P30793 250 aa11.81□□□□□ -0.52
PABPC1-208ENST00000519004 RTP5Q14D33 572 aa11.81□□□□□ -0.52
PABPC1-208ENST00000519004 TCEAL5Q5H9L2 206 aa11.81□□□□□ -0.52
PABPC1-208ENST00000519004 TSPO2Q5TGU0 170 aa11.81□□□□□ -0.52
PABPC1-208ENST00000519004 LIAT1Q6ZQX7 453 aa11.81□□□□□ -0.52
PABPC1-208ENST00000519004 OR2T10Q8NGZ9 312 aa11.81□□□□□ -0.52
PABPC1-208ENST00000519004 SMIM10Q96HG1 83 aa11.81□□□□□ -0.52
PABPC1-208ENST00000519004 VPS25Q9BRG1 176 aa11.81□□□□□ -0.52
PABPC1-208ENST00000519004 AGMATQ9BSE5 352 aa11.81□□□□□ -0.52
PABPC1-208ENST00000519004 LIME1Q9H400 295 aa11.81□□□□□ -0.52
PABPC1-208ENST00000519004 TMEM9BQ9NQ34 198 aa11.81□□□□□ -0.52
PABPC1-208ENST00000519004 THAP10Q9P2Z0 257 aaPredicted RBP11.81□□□□□ -0.52
PABPC1-208ENST00000519004 FOXI3A8MTJ6 420 aaPredicted RBP11.81□□□□□ -0.52
PABPC1-208ENST00000519004 ZNF878C9JN71 531 aa11.81□□□□□ -0.52
PABPC1-208ENST00000519004 PROB1E7EW31 1015 aa11.81□□□□□ -0.52
PABPC1-208ENST00000519004 C11orf98E9PRG8 122 aa11.81□□□□□ -0.52
PABPC1-208ENST00000519004 B3GALT2O43825 422 aa11.81□□□□□ -0.52
PABPC1-208ENST00000519004 COMPP49747 757 aaPredicted RBP11.81□□□□□ -0.52
PABPC1-208ENST00000519004 DYNLT3P51808 116 aa11.81□□□□□ -0.52
PABPC1-208ENST00000519004 RPL15P61313 204 aaKnown RBP11.81□□□□□ -0.52
PABPC1-208ENST00000519004 RPL23P62829 140 aaKnown RBP11.81□□□□□ -0.52
PABPC1-208ENST00000519004 FAM110CQ1W6H9 321 aa11.81□□□□□ -0.52
PABPC1-208ENST00000519004 BSXQ3C1V8 233 aa11.81□□□□□ -0.52
PABPC1-208ENST00000519004 CPEB2Q7Z5Q1 589 aaKnown RBP11.81□□□□□ -0.52
PABPC1-208ENST00000519004 TMEM252Q8N6L7 170 aa11.81□□□□□ -0.52
PABPC1-208ENST00000519004 OR4C3Q8NH37 302 aa11.81□□□□□ -0.52
PABPC1-208ENST00000519004 NT5CQ8TCD5 201 aa11.81□□□□□ -0.52
PABPC1-208ENST00000519004 ZNF524Q96C55 264 aa11.81□□□□□ -0.52
PABPC1-208ENST00000519004 MSI2Q96DH6 328 aaKnown RBP11.81□□□□□ -0.52
PABPC1-208ENST00000519004 VN1R3Q9BXE9 311 aa11.81□□□□□ -0.52
PABPC1-208ENST00000519004 WWTR1Q9GZV5 400 aa11.81□□□□□ -0.52
PABPC1-208ENST00000519004 ZNF552Q9H707 407 aaPredicted RBP11.81□□□□□ -0.52
PABPC1-208ENST00000519004 RPH3ALQ9UNE2 315 aa11.81□□□□□ -0.52
PABPC1-208ENST00000519004 COX11Q9Y6N1 276 aa11.81□□□□□ -0.52
PABPC1-208ENST00000519004 TRPM6Q9BX84 2022 aa11.81□□□□□ -0.52
PABPC1-208ENST00000519004 IGHV2-70DA0A0C4DH43 119 aa11.8□□□□□ -0.52
PABPC1-208ENST00000519004 CCDC85CA6NKD9 419 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms