RNA–Protein interactions for RNA: ENST00000514901.5

NUP54-216, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-216ENST00000514901 HSD17B12Q53GQ0 312 aa11.83□□□□□ -0.52
NUP54-216ENST00000514901 RNF144BQ7Z419 303 aa11.83□□□□□ -0.52
NUP54-216ENST00000514901 BATF2Q8N1L9 274 aa11.83□□□□□ -0.52
NUP54-216ENST00000514901 DACT3Q96B18 629 aaPredicted RBP11.83□□□□□ -0.52
NUP54-216ENST00000514901 FOXRED1Q96CU9 486 aaPredicted RBP11.83□□□□□ -0.52
NUP54-216ENST00000514901 UQCC2Q9BRT2 126 aa11.83□□□□□ -0.52
NUP54-216ENST00000514901 TMPRSS13Q9BYE2 586 aa11.83□□□□□ -0.52
NUP54-216ENST00000514901 METTL9Q9H1A3 318 aa11.83□□□□□ -0.52
NUP54-216ENST00000514901 OR14J1Q9UGF5 321 aa11.83□□□□□ -0.52
NUP54-216ENST00000514901 AUP1Q9Y679 476 aa11.83□□□□□ -0.52
NUP54-216ENST00000514901 A0A087WXM4 84 aa11.82□□□□□ -0.52
NUP54-216ENST00000514901 A0A1B0GW55 424 aa11.82□□□□□ -0.52
NUP54-216ENST00000514901 C22orf46C9J442 243 aa11.82□□□□□ -0.52
NUP54-216ENST00000514901 CCRL2O00421 344 aa11.82□□□□□ -0.52
NUP54-216ENST00000514901 HAND1O96004 215 aa11.82□□□□□ -0.52
NUP54-216ENST00000514901 SFTPBP07988 381 aa11.82□□□□□ -0.52
NUP54-216ENST00000514901 DUX4L2P0CJ85 424 aa11.82□□□□□ -0.52
NUP54-216ENST00000514901 DUX4L3P0CJ86 424 aa11.82□□□□□ -0.52
NUP54-216ENST00000514901 DUX4L4P0CJ87 422 aa11.82□□□□□ -0.52
NUP54-216ENST00000514901 DUX4L5P0CJ88 424 aa11.82□□□□□ -0.52
NUP54-216ENST00000514901 DUX4L6P0CJ89 424 aa11.82□□□□□ -0.52
NUP54-216ENST00000514901 DUX4L7P0CJ90 424 aa11.82□□□□□ -0.52
NUP54-216ENST00000514901 NDUFB7P17568 137 aa11.82□□□□□ -0.52
NUP54-216ENST00000514901 PRKACAP17612 351 aa11.82□□□□□ -0.52
NUP54-216ENST00000514901 GALP22466 123 aa11.82□□□□□ -0.52
NUP54-216ENST00000514901 PSMB9P28065 219 aa11.82□□□□□ -0.52
NUP54-216ENST00000514901 SRP14P37108 136 aaKnown RBP11.82□□□□□ -0.52
NUP54-216ENST00000514901 CAPZA1P52907 286 aa11.82□□□□□ -0.52
NUP54-216ENST00000514901 SCGB2A2Q13296 93 aa11.82□□□□□ -0.52
NUP54-216ENST00000514901 GPR176Q14439 515 aa11.82□□□□□ -0.52
NUP54-216ENST00000514901 INSL4Q14641 139 aa11.82□□□□□ -0.52
NUP54-216ENST00000514901 DUX4L9Q6RFH8 374 aaPredicted RBP11.82□□□□□ -0.52
NUP54-216ENST00000514901 TMEM91Q6ZNR0 172 aa11.82□□□□□ -0.52
NUP54-216ENST00000514901 ZNRF1Q8ND25 227 aa11.82□□□□□ -0.52
NUP54-216ENST00000514901 LY6G5BQ8NDX9 201 aa11.82□□□□□ -0.52
NUP54-216ENST00000514901 TMEM185AQ8NFB2 350 aa11.82□□□□□ -0.52
NUP54-216ENST00000514901 Q8NFD4 153 aa11.82□□□□□ -0.52
NUP54-216ENST00000514901 OR5D13Q8NGL4 314 aa11.82□□□□□ -0.52
NUP54-216ENST00000514901 PPP1R35Q8TAP8 253 aa11.82□□□□□ -0.52
NUP54-216ENST00000514901 TBC1D15Q8TC07 691 aa11.82□□□□□ -0.52
NUP54-216ENST00000514901 FAM192AQ9GZU8 254 aa11.82□□□□□ -0.52
NUP54-216ENST00000514901 CNTD2Q9H8S5 307 aa11.82□□□□□ -0.52
NUP54-216ENST00000514901 ELL3Q9HB65 397 aaPredicted RBP11.82□□□□□ -0.52
NUP54-216ENST00000514901 NDUFB11Q9NX14 153 aa11.82□□□□□ -0.52
NUP54-216ENST00000514901 IL36GQ9NZH8 169 aa11.82□□□□□ -0.52
NUP54-216ENST00000514901 DUX4Q9UBX2 424 aa11.82□□□□□ -0.52
NUP54-216ENST00000514901 RPUSD1Q9UJJ7 312 aaKnown RBP11.82□□□□□ -0.52
NUP54-216ENST00000514901 ING4Q9UNL4 249 aa11.82□□□□□ -0.52
NUP54-216ENST00000514901 NF1P21359 2839 aa11.81□□□□□ -0.52
NUP54-216ENST00000514901 TRBV23-1A0A0A0MS06 115 aa11.81□□□□□ -0.52
NUP54-216ENST00000514901 K7N7A8 449 aa11.81□□□□□ -0.52
NUP54-216ENST00000514901 FCN3O75636 299 aa11.81□□□□□ -0.52
NUP54-216ENST00000514901 FAM157CP0CG43 387 aa11.81□□□□□ -0.52
NUP54-216ENST00000514901 SRD5A1P18405 259 aa11.81□□□□□ -0.52
NUP54-216ENST00000514901 RANBP1P43487 201 aa11.81□□□□□ -0.52
NUP54-216ENST00000514901 OR3A4PP47883 348 aa11.81□□□□□ -0.52
NUP54-216ENST00000514901 RIPPLY3P57055 190 aa11.81□□□□□ -0.52
NUP54-216ENST00000514901 FGF12P61328 243 aa11.81□□□□□ -0.52
NUP54-216ENST00000514901 COL10A1Q03692 680 aa11.81□□□□□ -0.52
NUP54-216ENST00000514901 SSX1Q16384 188 aa11.81□□□□□ -0.52
NUP54-216ENST00000514901 SYT6Q5T7P8 510 aaPredicted RBP11.81□□□□□ -0.52
NUP54-216ENST00000514901 GLT8D1Q68CQ7 371 aa11.81□□□□□ -0.52
NUP54-216ENST00000514901 C1QL2Q7Z5L3 287 aa11.81□□□□□ -0.52
NUP54-216ENST00000514901 JAGN1Q8N5M9 183 aa11.81□□□□□ -0.52
NUP54-216ENST00000514901 TSPAN14Q8NG11 270 aa11.81□□□□□ -0.52
NUP54-216ENST00000514901 C8orf46Q8TAG6 207 aa11.81□□□□□ -0.52
NUP54-216ENST00000514901 NANPQ8TBE9 248 aa11.81□□□□□ -0.52
NUP54-216ENST00000514901 SNX22Q96L94 193 aa11.81□□□□□ -0.52
NUP54-216ENST00000514901 DCTN5Q9BTE1 182 aa11.81□□□□□ -0.52
NUP54-216ENST00000514901 VCX3AQ9NNX9 186 aa11.81□□□□□ -0.52
NUP54-216ENST00000514901 OPN4Q9UHM6 478 aa11.81□□□□□ -0.52
NUP54-216ENST00000514901 GSTK1Q9Y2Q3 226 aa11.81□□□□□ -0.52
NUP54-216ENST00000514901 SVEP1Q4LDE5 3571 aa11.81□□□□□ -0.52
NUP54-216ENST00000514901 MXRA5Q9NR99 2828 aa11.81□□□□□ -0.52
NUP54-216ENST00000514901 TRDV1A0A1B0GX56 115 aa11.8□□□□□ -0.52
NUP54-216ENST00000514901 MAGEA13PA6NCF6 341 aa11.8□□□□□ -0.52
NUP54-216ENST00000514901 AVPP01185 164 aa11.8□□□□□ -0.52
NUP54-216ENST00000514901 CSTBP04080 98 aaKnown RBP11.8□□□□□ -0.52
NUP54-216ENST00000514901 TFF1P04155 84 aa11.8□□□□□ -0.52
NUP54-216ENST00000514901 TK1P04183 234 aa11.8□□□□□ -0.52
NUP54-216ENST00000514901 SELLP14151 372 aa11.8□□□□□ -0.52
NUP54-216ENST00000514901 LMO1P25800 156 aa11.8□□□□□ -0.52
NUP54-216ENST00000514901 PSMD7P51665 324 aa11.8□□□□□ -0.52
NUP54-216ENST00000514901 GP2P55259 537 aaKnown RBP11.8□□□□□ -0.52
NUP54-216ENST00000514901 FABP5Q01469 135 aa11.8□□□□□ -0.52
NUP54-216ENST00000514901 IL13RA2Q14627 380 aa11.8□□□□□ -0.52
NUP54-216ENST00000514901 FAM27D1Q5T7N8 215 aa11.8□□□□□ -0.52
NUP54-216ENST00000514901 CD200R1LQ6Q8B3 271 aa11.8□□□□□ -0.52
NUP54-216ENST00000514901 LRRTM1Q86UE6 522 aa11.8□□□□□ -0.52
NUP54-216ENST00000514901 LYPD6Q86Y78 171 aa11.8□□□□□ -0.52
NUP54-216ENST00000514901 ASCC1Q8N9N2 400 aaKnown RBP11.8□□□□□ -0.52
NUP54-216ENST00000514901 CHST4Q8NCG5 386 aa11.8□□□□□ -0.52
NUP54-216ENST00000514901 OR51T1Q8NGJ9 327 aa11.8□□□□□ -0.52
NUP54-216ENST00000514901 H1FXQ92522 213 aaKnown RBP11.8□□□□□ -0.52
NUP54-216ENST00000514901 MRPS24Q96EL2 167 aaKnown RBP11.8□□□□□ -0.52
NUP54-216ENST00000514901 PPIL3Q9H2H8 161 aaKnown RBP11.8□□□□□ -0.52
NUP54-216ENST00000514901 ZNF696Q9H7X3 374 aa11.8□□□□□ -0.52
NUP54-216ENST00000514901 EXOSC4Q9NPD3 245 aaKnown RBP11.8□□□□□ -0.52
NUP54-216ENST00000514901 GHRLQ9UBU3 117 aa11.8□□□□□ -0.52
NUP54-216ENST00000514901 KPTNQ9Y664 436 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms