RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 C15orf40Q8WUR7 153 aa3.35□□□□□ -1.87
RFC1-216ENST00000514572 RNF138Q8WVD3 245 aa3.35□□□□□ -1.87
RFC1-216ENST00000514572 FGF13Q92913 245 aa3.35□□□□□ -1.87
RFC1-216ENST00000514572 ZNF799Q96GE5 643 aa3.35□□□□□ -1.87
RFC1-216ENST00000514572 TSNAXQ99598 290 aaKnown RBP3.35□□□□□ -1.87
RFC1-216ENST00000514572 UTP23Q9BRU9 249 aaKnown RBP3.35□□□□□ -1.87
RFC1-216ENST00000514572 SLC25A39Q9BZJ4 359 aaPredicted RBP3.35□□□□□ -1.87
RFC1-216ENST00000514572 ULBP2Q9BZM5 246 aa3.35□□□□□ -1.87
RFC1-216ENST00000514572 TMEM27Q9HBJ8 222 aa3.35□□□□□ -1.87
RFC1-216ENST00000514572 ZDHHC4Q9NPG8 344 aa3.35□□□□□ -1.87
RFC1-216ENST00000514572 ANAPC11Q9NYG5 84 aa3.35□□□□□ -1.87
RFC1-216ENST00000514572 VAX2Q9UIW0 290 aa3.35□□□□□ -1.87
RFC1-216ENST00000514572 NEU3Q9UQ49 428 aa3.35□□□□□ -1.87
RFC1-216ENST00000514572 TSSC4Q9Y5U2 329 aaPredicted RBP3.35□□□□□ -1.87
RFC1-216ENST00000514572 MYO18AQ92614 2054 aaKnown RBP3.35□□□□□ -1.87
RFC1-216ENST00000514572 PDCD11Q14690 1871 aaKnown RBP3.35□□□□□ -1.87
RFC1-216ENST00000514572 THADAQ6YHU6 1953 aa3.34□□□□□ -1.87
RFC1-216ENST00000514572 LRRK2Q5S007 2527 aa3.34□□□□□ -1.87
RFC1-216ENST00000514572 TENM4Q6N022 2769 aa3.34□□□□□ -1.87
RFC1-216ENST00000514572 IGLV1-50A0A075B6I6 118 aa3.34□□□□□ -1.87
RFC1-216ENST00000514572 IGHV2OR16-5A0A0B4J2B6 119 aa3.34□□□□□ -1.87
RFC1-216ENST00000514572 GOLGA8QA0A0J9YX86 632 aa3.34□□□□□ -1.87
RFC1-216ENST00000514572 IGHV5-10-1A0A0J9YXX1 117 aa3.34□□□□□ -1.87
RFC1-216ENST00000514572 TVP23AA6NH52 213 aa3.34□□□□□ -1.87
RFC1-216ENST00000514572 ARL5CA6NH57 179 aa3.34□□□□□ -1.87
RFC1-216ENST00000514572 GCM2O75603 506 aaPredicted RBP3.34□□□□□ -1.87
RFC1-216ENST00000514572 BRI3O95415 125 aa3.34□□□□□ -1.87
RFC1-216ENST00000514572 TTC4O95801 387 aa3.34□□□□□ -1.87
RFC1-216ENST00000514572 DEKP35659 375 aaKnown RBP3.34□□□□□ -1.87
RFC1-216ENST00000514572 ARL2P36404 184 aa3.34□□□□□ -1.87
RFC1-216ENST00000514572 P2RY2P41231 377 aa3.34□□□□□ -1.87
RFC1-216ENST00000514572 KDSRQ06136 332 aa3.34□□□□□ -1.87
RFC1-216ENST00000514572 USF2Q15853 346 aaPredicted RBP3.34□□□□□ -1.87
RFC1-216ENST00000514572 N4BP2L1Q5TBK1 243 aaPredicted RBP3.34□□□□□ -1.87
RFC1-216ENST00000514572 STEAP4Q687X5 459 aa3.34□□□□□ -1.87
RFC1-216ENST00000514572 CLEC6AQ6EIG7 209 aa3.34□□□□□ -1.87
RFC1-216ENST00000514572 SLC30A8Q8IWU4 369 aa3.34□□□□□ -1.87
RFC1-216ENST00000514572 C11orf53Q8IXP5 236 aa3.34□□□□□ -1.87
RFC1-216ENST00000514572 SYCE1Q8N0S2 351 aa3.34□□□□□ -1.87
RFC1-216ENST00000514572 OR4D6Q8NGJ1 314 aa3.34□□□□□ -1.87
RFC1-216ENST00000514572 CDKL2Q92772 493 aa3.34□□□□□ -1.87
RFC1-216ENST00000514572 PTX4Q96A99 478 aa3.34□□□□□ -1.87
RFC1-216ENST00000514572 SMARCD1Q96GM5 515 aa3.34□□□□□ -1.87
RFC1-216ENST00000514572 BMFQ96LC9 184 aa3.34□□□□□ -1.87
RFC1-216ENST00000514572 RDH12Q96NR8 316 aa3.34□□□□□ -1.87
RFC1-216ENST00000514572 NAPGQ99747 312 aaPredicted RBP3.34□□□□□ -1.87
RFC1-216ENST00000514572 FRMD8P1Q9BZ68 369 aaPredicted RBP3.34□□□□□ -1.87
RFC1-216ENST00000514572 TOLLIPQ9H0E2 274 aa3.34□□□□□ -1.87
RFC1-216ENST00000514572 ARV1Q9H2C2 271 aa3.34□□□□□ -1.87
RFC1-216ENST00000514572 SPACA1Q9HBV2 294 aa3.34□□□□□ -1.87
RFC1-216ENST00000514572 C6orf50Q9HD87 102 aa3.34□□□□□ -1.87
RFC1-216ENST00000514572 NECAP2Q9NVZ3 263 aa3.34□□□□□ -1.87
RFC1-216ENST00000514572 ACOT9Q9Y305 439 aa3.34□□□□□ -1.87
RFC1-216ENST00000514572 PTPRQQ9UMZ3 2332 aa3.34□□□□□ -1.87
RFC1-216ENST00000514572 TICRRQ7Z2Z1 1910 aa3.34□□□□□ -1.88
RFC1-216ENST00000514572 SPTBN1Q01082 2364 aaKnown RBP3.33□□□□□ -1.88
RFC1-216ENST00000514572 COL12A1Q99715 3063 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 VWA8A3KMH1 1905 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 SHROOM3Q8TF72 1996 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 CITO14578 2027 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 IGKV1-27A0A075B6S5 117 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 TRAV8-7A0A075B6U6 113 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 A0A096LNJ9 63 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 SMIM26A0A096LP01 95 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 IGKV6-21A0A0C4DH24 114 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 A0A1B0GVY2 172 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 MGAT4DA6NG13 374 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 SEC14L6B5MCN3 397 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 C11orf94C9JXX5 98 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 SOCS1O15524 211 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 TRAPPC3O43617 180 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 ZNF806P0C7X5 589 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 PSG2P11465 335 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 MDKP21741 143 aaPredicted RBP3.33□□□□□ -1.88
RFC1-216ENST00000514572 CXCR1P25024 350 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 HOXA6P31267 233 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 GGT2P36268 569 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 PRLHRP49683 370 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 CDKN2DP55273 166 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 RPL23P62829 140 aaKnown RBP3.33□□□□□ -1.88
RFC1-216ENST00000514572 C2orf80Q0P641 193 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 MADCAM1Q13477 382 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 KRT71Q3SY84 523 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 TFDP3Q5H9I0 405 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 ACTL10Q5JWF8 245 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 KDM4DQ6B0I6 523 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 FAM19A1Q7Z5A9 133 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 CA13Q8N1Q1 262 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 RNF175Q8N4F7 328 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 ARIH2OSQ8N7S6 290 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 LINC00469Q8N7U9 141 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 TCEAL3Q969E4 200 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 TM4SF18Q96CE8 201 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 MBOAT7Q96N66 472 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 ZIM3Q96PE6 472 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 TIMM17AQ99595 171 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 C1orf198Q9H425 327 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 C12orf10Q9HB07 376 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 VCX3AQ9NNX9 186 aa3.33□□□□□ -1.88
RFC1-216ENST00000514572 LHX9Q9NQ69 397 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms