RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 FGF12P61328 243 aa8.52□□□□□ -1.05
NEDD9-214ENST00000513989 ERVK11-1P61568 191 aa8.52□□□□□ -1.05
NEDD9-214ENST00000513989 SPCS2Q15005 226 aa8.52□□□□□ -1.05
NEDD9-214ENST00000513989 SPIN3Q5JUX0 258 aa8.52□□□□□ -1.05
NEDD9-214ENST00000513989 TEX36Q5VZQ5 186 aa8.52□□□□□ -1.05
NEDD9-214ENST00000513989 SFRP4Q6FHJ7 346 aaPredicted RBP8.52□□□□□ -1.05
NEDD9-214ENST00000513989 FAM166AQ6J272 317 aa8.52□□□□□ -1.05
NEDD9-214ENST00000513989 ACP7Q6ZNF0 438 aa8.52□□□□□ -1.05
NEDD9-214ENST00000513989 SLC36A1Q7Z2H8 476 aa8.52□□□□□ -1.05
NEDD9-214ENST00000513989 GCSAMQ8N6F7 178 aa8.52□□□□□ -1.05
NEDD9-214ENST00000513989 ZNF525Q8N782 197 aa8.52□□□□□ -1.05
NEDD9-214ENST00000513989 Q8NFD4 153 aa8.52□□□□□ -1.05
NEDD9-214ENST00000513989 OR51T1Q8NGJ9 327 aa8.52□□□□□ -1.05
NEDD9-214ENST00000513989 PPP1R35Q8TAP8 253 aa8.52□□□□□ -1.05
NEDD9-214ENST00000513989 SLC25A28Q96A46 364 aa8.52□□□□□ -1.05
NEDD9-214ENST00000513989 PTX4Q96A99 478 aa8.52□□□□□ -1.05
NEDD9-214ENST00000513989 MED30Q96HR3 178 aa8.52□□□□□ -1.05
NEDD9-214ENST00000513989 ZNF488Q96MN9 340 aa8.52□□□□□ -1.05
NEDD9-214ENST00000513989 GFI1Q99684 422 aa8.52□□□□□ -1.05
NEDD9-214ENST00000513989 SELENOIQ9C0D9 397 aa8.52□□□□□ -1.05
NEDD9-214ENST00000513989 RBM38Q9H0Z9 239 aaKnown RBP8.52□□□□□ -1.05
NEDD9-214ENST00000513989 DNTTIP1Q9H147 329 aa8.52□□□□□ -1.05
NEDD9-214ENST00000513989 SEBOXQ9HB31 216 aaPredicted RBP8.52□□□□□ -1.05
NEDD9-214ENST00000513989 SPACA1Q9HBV2 294 aa8.52□□□□□ -1.05
NEDD9-214ENST00000513989 RBFOX1Q9NWB1 397 aaKnown RBP8.52□□□□□ -1.05
NEDD9-214ENST00000513989 NLKQ9UBE8 527 aa8.52□□□□□ -1.05
NEDD9-214ENST00000513989 FBLN5Q9UBX5 448 aa8.52□□□□□ -1.05
NEDD9-214ENST00000513989 MIOXQ9UGB7 285 aa8.52□□□□□ -1.05
NEDD9-214ENST00000513989 ST3GAL6Q9Y274 331 aa8.52□□□□□ -1.05
NEDD9-214ENST00000513989 WIPI2Q9Y4P8 454 aa8.52□□□□□ -1.05
NEDD9-214ENST00000513989 IGKV1-12A0A0C4DH73 117 aa8.51□□□□□ -1.05
NEDD9-214ENST00000513989 A0A0G2JK05 382 aa8.51□□□□□ -1.05
NEDD9-214ENST00000513989 NKX6-3A6NJ46 265 aa8.51□□□□□ -1.05
NEDD9-214ENST00000513989 RFPL4AA6NLU0 287 aa8.51□□□□□ -1.05
NEDD9-214ENST00000513989 RFPL4AL1F8VTS6 287 aa8.51□□□□□ -1.05
NEDD9-214ENST00000513989 WNT9BO14905 357 aa8.51□□□□□ -1.05
NEDD9-214ENST00000513989 MPIG6BO95866 241 aa8.51□□□□□ -1.05
NEDD9-214ENST00000513989 IGKV1D-12P01611 117 aa8.51□□□□□ -1.05
NEDD9-214ENST00000513989 SFTPBP07988 381 aa8.51□□□□□ -1.05
NEDD9-214ENST00000513989 CHRM2P08172 466 aa8.51□□□□□ -1.05
NEDD9-214ENST00000513989 SLC2A2P11168 524 aaPredicted RBP8.51□□□□□ -1.05
NEDD9-214ENST00000513989 MGMTP16455 207 aa8.51□□□□□ -1.05
NEDD9-214ENST00000513989 RAB6AP20340 208 aa8.51□□□□□ -1.05
NEDD9-214ENST00000513989 GABRA2P47869 451 aa8.51□□□□□ -1.05
NEDD9-214ENST00000513989 CLDN12P56749 244 aa8.51□□□□□ -1.05
NEDD9-214ENST00000513989 IL13RA2Q14627 380 aa8.51□□□□□ -1.05
NEDD9-214ENST00000513989 TMEM155Q4W5P6 130 aa8.51□□□□□ -1.05
NEDD9-214ENST00000513989 NHLRC3Q5JS37 347 aa8.51□□□□□ -1.05
NEDD9-214ENST00000513989 Q5PR19 223 aa8.51□□□□□ -1.05
NEDD9-214ENST00000513989 DCDC5Q6ZRR9 648 aa8.51□□□□□ -1.05
NEDD9-214ENST00000513989 NLRC3Q7RTR2 1065 aa8.51□□□□□ -1.05
NEDD9-214ENST00000513989 RNF144BQ7Z419 303 aa8.51□□□□□ -1.05
NEDD9-214ENST00000513989 PRIMA1Q86XR5 153 aa8.51□□□□□ -1.05
NEDD9-214ENST00000513989 OR5D13Q8NGL4 314 aa8.51□□□□□ -1.05
NEDD9-214ENST00000513989 OR10K1Q8NGX5 313 aa8.51□□□□□ -1.05
NEDD9-214ENST00000513989 C10orf105Q8TEF2 133 aa8.51□□□□□ -1.05
NEDD9-214ENST00000513989 COX4I2Q96KJ9 171 aa8.51□□□□□ -1.05
NEDD9-214ENST00000513989 CMTM3Q96MX0 182 aa8.51□□□□□ -1.05
NEDD9-214ENST00000513989 GAL3ST1Q99999 423 aa8.51□□□□□ -1.05
NEDD9-214ENST00000513989 TMEM59Q9BXS4 323 aa8.51□□□□□ -1.05
NEDD9-214ENST00000513989 WDR13Q9H1Z4 485 aa8.51□□□□□ -1.05
NEDD9-214ENST00000513989 ZNF665Q9H7R5 613 aa8.51□□□□□ -1.05
NEDD9-214ENST00000513989 TMEM165Q9HC07 324 aa8.51□□□□□ -1.05
NEDD9-214ENST00000513989 HES4Q9HCC6 221 aa8.51□□□□□ -1.05
NEDD9-214ENST00000513989 CCDC59Q9P031 241 aaKnown RBP8.51□□□□□ -1.05
NEDD9-214ENST00000513989 OR14J1Q9UGF5 321 aa8.51□□□□□ -1.05
NEDD9-214ENST00000513989 ADAM30Q9UKF2 790 aa8.51□□□□□ -1.05
NEDD9-214ENST00000513989 SPATA2Q9UM82 520 aa8.51□□□□□ -1.05
NEDD9-214ENST00000513989 IGHV3OR15-7A0A075B7D8 119 aa8.5□□□□□ -1.05
NEDD9-214ENST00000513989 TMEM272A0A1B0GTI8 110 aa8.5□□□□□ -1.05
NEDD9-214ENST00000513989 FAM90A10PA6NDY2 464 aa8.5□□□□□ -1.05
NEDD9-214ENST00000513989 FAM90A18PA6NE21 464 aa8.5□□□□□ -1.05
NEDD9-214ENST00000513989 FAM90A16PA6NEW6 464 aa8.5□□□□□ -1.05
NEDD9-214ENST00000513989 FAM90A20PA6NIJ5 464 aa8.5□□□□□ -1.05
NEDD9-214ENST00000513989 FAM90A8PA6NJQ4 464 aa8.5□□□□□ -1.05
NEDD9-214ENST00000513989 FAM90A7PA6NKC0 464 aa8.5□□□□□ -1.05
NEDD9-214ENST00000513989 FAM90A22PA8MWA6 464 aa8.5□□□□□ -1.05
NEDD9-214ENST00000513989 TMEM14DPA8MWL7 114 aa8.5□□□□□ -1.05
NEDD9-214ENST00000513989 FAM90A12PA8MX19 464 aa8.5□□□□□ -1.05
NEDD9-214ENST00000513989 FAM90A5PA8MXJ8 464 aa8.5□□□□□ -1.05
NEDD9-214ENST00000513989 FAM90A23PA8MXZ1 464 aa8.5□□□□□ -1.05
NEDD9-214ENST00000513989 ZNF205O95201 554 aa8.5□□□□□ -1.05
NEDD9-214ENST00000513989 LY6G6DO95868 133 aa8.5□□□□□ -1.05
NEDD9-214ENST00000513989 IGHV2-70P01814 119 aa8.5□□□□□ -1.05
NEDD9-214ENST00000513989 GYPAP02724 150 aa8.5□□□□□ -1.05
NEDD9-214ENST00000513989 FAM90A15PP0C7V4 464 aa8.5□□□□□ -1.05
NEDD9-214ENST00000513989 FAM90A13PP0C7W8 464 aa8.5□□□□□ -1.05
NEDD9-214ENST00000513989 FAM90A14PP0C7W9 464 aa8.5□□□□□ -1.05
NEDD9-214ENST00000513989 FAM90A24PP0C7X0 464 aa8.5□□□□□ -1.05
NEDD9-214ENST00000513989 VSIG8P0DPA2 414 aa8.5□□□□□ -1.05
NEDD9-214ENST00000513989 PSG2P11465 335 aa8.5□□□□□ -1.05
NEDD9-214ENST00000513989 CD80P33681 288 aa8.5□□□□□ -1.05
NEDD9-214ENST00000513989 NR4A2P43354 598 aa8.5□□□□□ -1.05
NEDD9-214ENST00000513989 PITPNBP48739 271 aa8.5□□□□□ -1.05
NEDD9-214ENST00000513989 SCN1BQ07699 218 aa8.5□□□□□ -1.05
NEDD9-214ENST00000513989 ZNF146Q15072 292 aa8.5□□□□□ -1.05
NEDD9-214ENST00000513989 ZMYND11Q15326 602 aa8.5□□□□□ -1.05
NEDD9-214ENST00000513989 MPV17LQ2QL34 196 aa8.5□□□□□ -1.05
NEDD9-214ENST00000513989 ZNF404Q494X3 552 aa8.5□□□□□ -1.05
NEDD9-214ENST00000513989 AVPI1Q5T686 147 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms