RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 HOXB3P14651 431 aaPredicted RBP9.98□□□□□ -0.81
TCOF1-211ENST00000513346 ABLIM2Q6H8Q1 611 aa9.98□□□□□ -0.81
TCOF1-211ENST00000513346 TIPARPQ7Z3E1 657 aaKnown RBP9.98□□□□□ -0.81
TCOF1-211ENST00000513346 TGIF2LXQ8IUE1 241 aa9.98□□□□□ -0.81
TCOF1-211ENST00000513346 OR10P1Q8NGE3 313 aa9.98□□□□□ -0.81
TCOF1-211ENST00000513346 MOGAT1Q96PD6 335 aa9.98□□□□□ -0.81
TCOF1-211ENST00000513346 GABRG3Q99928 467 aa9.98□□□□□ -0.81
TCOF1-211ENST00000513346 MAP1LC3BQ9GZQ8 125 aa9.98□□□□□ -0.81
TCOF1-211ENST00000513346 SLC26A1Q9H2B4 701 aa9.98□□□□□ -0.81
TCOF1-211ENST00000513346 SMOC1Q9H4F8 434 aa9.98□□□□□ -0.81
TCOF1-211ENST00000513346 UTRNP46939 3433 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 IGHV1OR15-9A0A0B4J2B8 117 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 A0A1W2PNR3 127 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 OTOL1A6NHN0 477 aaPredicted RBP9.97□□□□□ -0.81
TCOF1-211ENST00000513346 DTYMKP23919 212 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 PP6455Q8WZ26 134 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 MRPL24Q96A35 216 aaKnown RBP9.97□□□□□ -0.81
TCOF1-211ENST00000513346 DAZAP1Q96EP5 407 aaKnown RBP9.97□□□□□ -0.81
TCOF1-211ENST00000513346 BET1LQ9NYM9 111 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 PRSS50Q9UI38 385 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 LTBP1Q14766 1721 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 TRBV5-5A0A0J9YX44 114 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 DUXBA0A1W2PPF3 345 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 AQP7O14520 342 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 NDUFA2O43678 99 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 ANGPTL7O43827 346 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 FAM157BP0CG42 384 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 THBS4P35443 961 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 ARL3P36405 182 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 PMP22Q01453 160 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 C2orf68Q2NKX9 166 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 PRICKLE4Q2TBC4 344 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 DMRTC1Q5HYR2 192 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 FAM219AQ8IW50 185 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 C17orf78Q8N4C9 275 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 CMTM2Q8TAZ6 248 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 ZNF596Q8TC21 504 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 MSI2Q96DH6 328 aaKnown RBP9.97□□□□□ -0.81
TCOF1-211ENST00000513346 KIAA1456Q9P272 454 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 ICAM5Q9UMF0 924 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 PARP14Q460N5 1801 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 TCF21O43680 179 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 CTSVO60911 334 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 ZNF737O75373 536 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 GUSBP08236 651 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 MESP2Q0VG99 397 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 PLGLAQ15195 96 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 ZNF141Q15928 474 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 NR2C2APQ86WQ0 139 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 ST8SIA1Q92185 356 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 COX14Q96I36 57 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 DEFB127Q9H1M4 99 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 COA4Q9NYJ1 87 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 CACNA1IQ9P0X4 2223 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 SCN10AQ9Y5Y9 1956 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 M0R135 149 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 TRAF3IP2O43734 574 aaPredicted RBP9.97□□□□□ -0.81
TCOF1-211ENST00000513346 SRSF5Q13243 272 aaKnown RBP9.97□□□□□ -0.81
TCOF1-211ENST00000513346 TRA2AQ13595 282 aaKnown RBP eCLIP9.97□□□□□ -0.811e-7■■■■■ 31.7
TCOF1-211ENST00000513346 GAMTQ14353 236 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 KISS1Q15726 138 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 GUSBP11Q6P575 273 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 ZNF799Q96GE5 643 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 DDA1Q9BW61 102 aa9.97□□□□□ -0.81
TCOF1-211ENST00000513346 MKRN2OSH3BPM6 223 aa9.96□□□□□ -0.81
TCOF1-211ENST00000513346 MPPED1O15442 326 aa9.96□□□□□ -0.81
TCOF1-211ENST00000513346 CLN3Q13286 438 aa9.96□□□□□ -0.81
TCOF1-211ENST00000513346 ZXDCQ2QGD7 858 aaPredicted RBP9.96□□□□□ -0.81
TCOF1-211ENST00000513346 KHDC3LQ587J8 217 aa9.96□□□□□ -0.81
TCOF1-211ENST00000513346 LHFPL2Q6ZUX7 228 aa9.96□□□□□ -0.81
TCOF1-211ENST00000513346 HIPK2Q9H2X6 1198 aa9.96□□□□□ -0.81
TCOF1-211ENST00000513346 MUC6Q6W4X9 2439 aa9.96□□□□□ -0.81
TCOF1-211ENST00000513346 SOCS1O15524 211 aa9.96□□□□□ -0.81
TCOF1-211ENST00000513346 EPPINO95925 133 aa9.96□□□□□ -0.81
TCOF1-211ENST00000513346 IL24Q13007 206 aa9.96□□□□□ -0.81
TCOF1-211ENST00000513346 OR1N1Q8NGS0 311 aa9.96□□□□□ -0.81
TCOF1-211ENST00000513346 UNC13CQ8NB66 2214 aa9.96□□□□□ -0.82
TCOF1-211ENST00000513346 SCGB2A1O75556 95 aa9.96□□□□□ -0.82
TCOF1-211ENST00000513346 CTLA4P16410 223 aa9.96□□□□□ -0.82
TCOF1-211ENST00000513346 OR3A4PP47883 348 aa9.96□□□□□ -0.82
TCOF1-211ENST00000513346 CATSPERDQ86XM0 798 aa9.96□□□□□ -0.82
TCOF1-211ENST00000513346 GPBAR1Q8TDU6 330 aa9.96□□□□□ -0.82
TCOF1-211ENST00000513346 EXTL1Q92935 676 aa9.96□□□□□ -0.82
TCOF1-211ENST00000513346 RAB40CQ96S21 281 aa9.96□□□□□ -0.82
TCOF1-211ENST00000513346 HEYLQ9NQ87 328 aaPredicted RBP9.96□□□□□ -0.82
TCOF1-211ENST00000513346 FUT9Q9Y231 359 aa9.96□□□□□ -0.82
TCOF1-211ENST00000513346 ST3GAL6Q9Y274 331 aa9.96□□□□□ -0.82
TCOF1-211ENST00000513346 UBE2CO00762 179 aa9.95□□□□□ -0.82
TCOF1-211ENST00000513346 ADAM20O43506 726 aa9.95□□□□□ -0.82
TCOF1-211ENST00000513346 FAHP16930 419 aa9.95□□□□□ -0.82
TCOF1-211ENST00000513346 CHRNA7P36544 502 aa9.95□□□□□ -0.82
TCOF1-211ENST00000513346 FUT5Q11128 374 aa9.95□□□□□ -0.82
TCOF1-211ENST00000513346 TIGITQ495A1 244 aa9.95□□□□□ -0.82
TCOF1-211ENST00000513346 MESTQ5EB52 335 aa9.95□□□□□ -0.82
TCOF1-211ENST00000513346 COL5A1-AS1Q5SY13 56 aa9.95□□□□□ -0.82
TCOF1-211ENST00000513346 SLC24A4Q8NFF2 622 aa9.95□□□□□ -0.82
TCOF1-211ENST00000513346 DMBX1Q8NFW5 382 aa9.95□□□□□ -0.82
TCOF1-211ENST00000513346 OR11L1Q8NGX0 322 aa9.95□□□□□ -0.82
TCOF1-211ENST00000513346 ELOVL1Q9BW60 279 aa9.95□□□□□ -0.82
TCOF1-211ENST00000513346 MYOZ1Q9NP98 299 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms