RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 PRDX2P32119 198 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 CD80P33681 288 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 GALR1P47211 349 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 RPL30P62888 115 aaKnown RBP3.73□□□□□ -1.81
VCAN-209ENST00000513016 OR2F1Q13607 317 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 IL13RA2Q14627 380 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 OPCMLQ14982 345 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 TIMM23BQ5SRD1 257 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 C12orf73Q69YU5 71 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 BAGE3Q86Y29 109 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 BAGE2Q86Y30 109 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 C9orf40Q8IXQ3 194 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 OR52I2Q8NH67 350 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 LILRB1Q8NHL6 650 aaPredicted RBP3.73□□□□□ -1.81
VCAN-209ENST00000513016 OR2D2Q9H210 308 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 ACAA1P09110 424 aaPredicted RBP3.73□□□□□ -1.81
VCAN-209ENST00000513016 COX6A1P12074 109 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 CCL2P13500 99 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 PJVKQ0ZLH3 352 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 RRN3P1Q2M238 152 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 WDR38Q5JTN6 314 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 CGB2Q6NT52 195 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 CD300LDQ6UXZ3 194 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 ETV3LQ6ZN32 361 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 MAVSQ7Z434 540 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 KCNRGQ8N5I3 272 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 ZDHHC22Q8N966 263 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 RPS4Y2Q8TD47 263 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 SNX22Q96L94 193 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 SH3BGRL3Q9H299 93 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 TUBA4BQ9H853 241 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 TMEM74BQ9NUR3 256 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 IL17BQ9UHF5 180 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 RABAC1Q9UI14 185 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 AK3Q9UIJ7 227 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 CHST2Q9Y4C5 530 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 A0A1W2PPV9 198 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 CDIPTO14735 213 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 TGOLN2O43493 480 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 DUS4LO95620 317 aaKnown RBP3.73□□□□□ -1.81
VCAN-209ENST00000513016 LIPFP07098 398 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 PATE4P0C8F1 98 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 ADIRFQ15847 76 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 CBLN3Q6UW01 205 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 OR4X2Q8NGF9 303 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 ADAMTS17Q8TE56 1095 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 SLC25A46Q96AG3 418 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 PERPQ96FX8 193 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 GOLGA4Q13439 2230 aaKnown RBP3.73□□□□□ -1.81
VCAN-209ENST00000513016 HMX2A2RU54 273 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 OR6C68A6NDL8 312 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 DEFB108AA8MXU0 73 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 CORTO00230 105 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 KIR2DL2P43627 348 aaPredicted RBP3.73□□□□□ -1.81
VCAN-209ENST00000513016 KIR3DL2P43630 455 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 CCR6P51684 374 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 CDK5Q00535 292 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 GAMTQ14353 236 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 OXA1LQ15070 435 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 C19orf35Q6ZS72 473 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 SPRED2Q7Z698 418 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 UBE3DQ7Z6J8 389 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 LYSMD2Q8IV50 215 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 OR52M1Q8NGK5 317 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 PCNPQ8WW12 178 aaKnown RBP3.73□□□□□ -1.81
VCAN-209ENST00000513016 GPR137Q96N19 417 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 NPAP1Q9NZP6 1156 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 PILRAQ9UKJ1 303 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 LAMB1P07942 1786 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 IGHV1-69-2A0A0G2JMI3 117 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 H3BMH7 237 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 BGLAPP02818 100 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 SLC25A5P05141 298 aaKnown RBP3.73□□□□□ -1.81
VCAN-209ENST00000513016 GIPP09681 153 aaPredicted RBP3.73□□□□□ -1.81
VCAN-209ENST00000513016 PSMB6P28072 239 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 KIAA0040Q15053 153 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 FAM27BQ5VT28 67 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 FAM219AQ8IW50 185 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 C1orf162Q8NEQ5 155 aaPredicted RBP3.73□□□□□ -1.81
VCAN-209ENST00000513016 OR1K1Q8NGR3 316 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 POM121Q96HA1 1249 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 RAX2Q96IS3 184 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 CXorf58Q96LI9 332 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 FOXJ2Q9P0K8 574 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 ING1Q9UK53 422 aaPredicted RBP3.73□□□□□ -1.81
VCAN-209ENST00000513016 SCN9AQ15858 1988 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 SLC25A4P12235 298 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 HTR1DP28221 377 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 S100A11P31949 105 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 LYZP61626 148 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 PCOLCEQ15113 449 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 TEX30Q5JUR7 227 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 AVPI1Q5T686 147 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 LYG2Q86SG7 212 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 SPACA3Q8IXA5 215 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 HARBI1Q96MB7 349 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 SH2D2AQ9NP31 389 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 MARF1Q9Y4F3 1742 aaKnown RBP3.73□□□□□ -1.81
VCAN-209ENST00000513016 SNRPGP15A8MWD9 76 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 TSPAN2O60636 221 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms