RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 SKP2Q13309 424 aa11.03□□□□□ -0.64
COL11A1-210ENST00000512756 ALKBH6Q3KRA9 238 aa11.03□□□□□ -0.64
COL11A1-210ENST00000512756 UBALD1Q8TB05 177 aa11.03□□□□□ -0.64
COL11A1-210ENST00000512756 FBXO17Q96EF6 278 aa11.03□□□□□ -0.64
COL11A1-210ENST00000512756 RASL10BQ96S79 203 aa11.03□□□□□ -0.64
COL11A1-210ENST00000512756 CXXC4Q9H2H0 198 aa11.03□□□□□ -0.64
COL11A1-210ENST00000512756 OR6C3Q9NZP0 311 aa11.03□□□□□ -0.64
COL11A1-210ENST00000512756 OR2M5A3KFT3 312 aa11.03□□□□□ -0.64
COL11A1-210ENST00000512756 TRDCB7Z8K6 153 aa11.03□□□□□ -0.64
COL11A1-210ENST00000512756 K7EQS6 105 aa11.03□□□□□ -0.64
COL11A1-210ENST00000512756 M0QZ24 198 aa11.03□□□□□ -0.64
COL11A1-210ENST00000512756 SNRPEP62304 92 aaKnown RBP11.03□□□□□ -0.64
COL11A1-210ENST00000512756 CLPPQ16740 277 aaPredicted RBP11.03□□□□□ -0.64
COL11A1-210ENST00000512756 C10orf111Q8N326 155 aa11.03□□□□□ -0.64
COL11A1-210ENST00000512756 BVESQ8NE79 360 aa11.03□□□□□ -0.64
COL11A1-210ENST00000512756 OR10G4Q8NGN3 311 aa11.03□□□□□ -0.64
COL11A1-210ENST00000512756 OR10G9Q8NGN4 311 aa11.03□□□□□ -0.64
COL11A1-210ENST00000512756 OR10G7Q8NGN6 311 aa11.03□□□□□ -0.64
COL11A1-210ENST00000512756 OR10D4PQ8NGN7 298 aa11.03□□□□□ -0.64
COL11A1-210ENST00000512756 RFESDQ8TAC1 157 aa11.03□□□□□ -0.64
COL11A1-210ENST00000512756 OR2D2Q9H210 308 aa11.03□□□□□ -0.64
COL11A1-210ENST00000512756 CLEC1BQ9P126 229 aa11.03□□□□□ -0.64
COL11A1-210ENST00000512756 NUP214P35658 2090 aaPredicted RBP11.03□□□□□ -0.64
COL11A1-210ENST00000512756 hADV38S2A0JD32 116 aa11.03□□□□□ -0.64
COL11A1-210ENST00000512756 RBFOX3A6NFN3 312 aa11.03□□□□□ -0.64
COL11A1-210ENST00000512756 CD1AP06126 327 aa11.03□□□□□ -0.64
COL11A1-210ENST00000512756 VDAC1P21796 283 aa11.03□□□□□ -0.64
COL11A1-210ENST00000512756 C16orf47Q6ZP98 133 aaPredicted RBP11.03□□□□□ -0.64
COL11A1-210ENST00000512756 MYPOPQ86VE0 399 aaPredicted RBP11.03□□□□□ -0.64
COL11A1-210ENST00000512756 D2HGDHQ8N465 521 aa11.03□□□□□ -0.64
COL11A1-210ENST00000512756 TMEM218A2RU14 115 aa11.02□□□□□ -0.64
COL11A1-210ENST00000512756 OPN1MWP04001 364 aa11.02□□□□□ -0.64
COL11A1-210ENST00000512756 OPN1MW2P0DN77 364 aa11.02□□□□□ -0.64
COL11A1-210ENST00000512756 OPN1MW3P0DN78 364 aa11.02□□□□□ -0.64
COL11A1-210ENST00000512756 SEZ6L2Q6UXD5 910 aa11.02□□□□□ -0.64
COL11A1-210ENST00000512756 OR4F17Q8NGA8 305 aa11.02□□□□□ -0.64
COL11A1-210ENST00000512756 OR2Y1Q8NGV0 311 aa11.02□□□□□ -0.64
COL11A1-210ENST00000512756 LRRC29Q8WV35 223 aa11.02□□□□□ -0.64
COL11A1-210ENST00000512756 LYRM2Q9NU23 88 aaPredicted RBP11.02□□□□□ -0.64
COL11A1-210ENST00000512756 NAT8BQ9UHF3 227 aa11.02□□□□□ -0.64
COL11A1-210ENST00000512756 A0A1W2PN81 502 aa11.02□□□□□ -0.64
COL11A1-210ENST00000512756 RD3LP0DJH9 198 aa11.02□□□□□ -0.64
COL11A1-210ENST00000512756 CXCL3P19876 107 aa11.02□□□□□ -0.64
COL11A1-210ENST00000512756 CHRNA7P36544 502 aa11.02□□□□□ -0.64
COL11A1-210ENST00000512756 MPLP40238 635 aa11.02□□□□□ -0.64
COL11A1-210ENST00000512756 GNG4P50150 75 aa11.02□□□□□ -0.64
COL11A1-210ENST00000512756 HIST1H3AP68431 136 aa11.02□□□□□ -0.64
COL11A1-210ENST00000512756 C1QL3Q5VWW1 255 aa11.02□□□□□ -0.64
COL11A1-210ENST00000512756 TMEM91Q6ZNR0 172 aa11.02□□□□□ -0.64
COL11A1-210ENST00000512756 MBD1Q9UIS9 605 aaPredicted RBP11.02□□□□□ -0.64
COL11A1-210ENST00000512756 MMP16P51512 607 aa11.02□□□□□ -0.65
COL11A1-210ENST00000512756 ZNF83P51522 516 aa11.02□□□□□ -0.65
COL11A1-210ENST00000512756 SSX7Q7RTT5 188 aa11.02□□□□□ -0.65
COL11A1-210ENST00000512756 RNF133Q8WVZ7 376 aa11.02□□□□□ -0.65
COL11A1-210ENST00000512756 ASB5Q8WWX0 329 aa11.02□□□□□ -0.65
COL11A1-210ENST00000512756 LOC102723971A0A1B0GUV8 181 aa11.02□□□□□ -0.65
COL11A1-210ENST00000512756 DUXBA0A1W2PPF3 345 aa11.02□□□□□ -0.65
COL11A1-210ENST00000512756 SYNGR2O43760 224 aa11.02□□□□□ -0.65
COL11A1-210ENST00000512756 HLA-GP17693 338 aa11.02□□□□□ -0.65
COL11A1-210ENST00000512756 OPRK1P41145 380 aa11.02□□□□□ -0.65
COL11A1-210ENST00000512756 FOXO1Q12778 655 aa11.02□□□□□ -0.65
COL11A1-210ENST00000512756 OR6S1Q8NH40 331 aa11.02□□□□□ -0.65
COL11A1-210ENST00000512756 RNF2Q99496 336 aa11.02□□□□□ -0.65
COL11A1-210ENST00000512756 GPR27Q9NS67 375 aa11.02□□□□□ -0.65
COL11A1-210ENST00000512756 ZMIZ1Q9ULJ6 1067 aa11.02□□□□□ -0.65
COL11A1-210ENST00000512756 GOLT1BQ9Y3E0 138 aa11.02□□□□□ -0.65
COL11A1-210ENST00000512756 RP1L1Q8IWN7 2480 aaPredicted RBP11.02□□□□□ -0.65
COL11A1-210ENST00000512756 BRWD1Q9NSI6 2320 aa11.02□□□□□ -0.65
COL11A1-210ENST00000512756 LEUTXA8MZ59 168 aa11.02□□□□□ -0.65
COL11A1-210ENST00000512756 SOCS1O15524 211 aa11.02□□□□□ -0.65
COL11A1-210ENST00000512756 OR3A1P47881 315 aa11.02□□□□□ -0.65
COL11A1-210ENST00000512756 HNRNPA3P51991 378 aaKnown RBP11.02□□□□□ -0.65
COL11A1-210ENST00000512756 EIF4EBP2Q13542 120 aaPredicted RBP11.02□□□□□ -0.65
COL11A1-210ENST00000512756 ZNF79Q15937 498 aa11.02□□□□□ -0.65
COL11A1-210ENST00000512756 KHDC1LQ5JSQ8 128 aa11.02□□□□□ -0.65
COL11A1-210ENST00000512756 COL13A1Q5TAT6 717 aaPredicted RBP11.02□□□□□ -0.65
COL11A1-210ENST00000512756 OR1L4Q8NGR5 311 aa11.02□□□□□ -0.65
COL11A1-210ENST00000512756 PTX4Q96A99 478 aa11.02□□□□□ -0.65
COL11A1-210ENST00000512756 ATP5SQ99766 215 aa11.02□□□□□ -0.65
COL11A1-210ENST00000512756 SH2D2AQ9NP31 389 aa11.02□□□□□ -0.65
COL11A1-210ENST00000512756 PARD6AQ9NPB6 346 aa11.02□□□□□ -0.65
COL11A1-210ENST00000512756 MANBALQ9NQG1 85 aa11.02□□□□□ -0.65
COL11A1-210ENST00000512756 BGLAPP02818 100 aa11.01□□□□□ -0.65
COL11A1-210ENST00000512756 PTTG1IPP53801 180 aa11.01□□□□□ -0.65
COL11A1-210ENST00000512756 POLR2GP62487 172 aaKnown RBP eCLIP11.01□□□□□ -0.65
COL11A1-210ENST00000512756 WDR73Q6P4I2 378 aa11.01□□□□□ -0.65
COL11A1-210ENST00000512756 TBC1D26Q86UD7 250 aa11.01□□□□□ -0.65
COL11A1-210ENST00000512756 LINC00862A6NCI5 91 aa11.01□□□□□ -0.65
COL11A1-210ENST00000512756 LANCL1O43813 399 aa11.01□□□□□ -0.65
COL11A1-210ENST00000512756 TOX4O94842 621 aa11.01□□□□□ -0.65
COL11A1-210ENST00000512756 KLF3P57682 345 aaPredicted RBP11.01□□□□□ -0.65
COL11A1-210ENST00000512756 RNF151Q2KHN1 245 aa11.01□□□□□ -0.65
COL11A1-210ENST00000512756 TOMM20LQ6UXN7 152 aa11.01□□□□□ -0.65
COL11A1-210ENST00000512756 TM4SF19Q96DZ7 209 aa11.01□□□□□ -0.65
COL11A1-210ENST00000512756 PLPPR2Q96GM1 343 aa11.01□□□□□ -0.65
COL11A1-210ENST00000512756 IL36GQ9NZH8 169 aa11.01□□□□□ -0.65
COL11A1-210ENST00000512756 YBX2Q9Y2T7 364 aaKnown RBP11.01□□□□□ -0.65
COL11A1-210ENST00000512756 DEFB108AA8MXU0 73 aa11.01□□□□□ -0.65
COL11A1-210ENST00000512756 OR4S2Q8NH73 311 aa11.01□□□□□ -0.65
COL11A1-210ENST00000512756 RPEQ96AT9 228 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms