RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 OR52N1Q8NH53 320 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 LINC01560Q8TB33 94 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 UBQLN3Q9H347 655 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 NDUFB11Q9NX14 153 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 MTCH2Q9Y6C9 303 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 TMSB15BA0A087X1C1 80 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 CD1AP06126 327 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 GPX1P07203 203 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 REG1BP48304 166 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 TMEM128Q5BJH2 165 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 TTC32Q5I0X7 151 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 FFAR4Q5NUL3 377 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 PARP12Q9H0J9 701 aaKnown RBP7.93□□□□□ -1.14
VCAN-208ENST00000512590 ALX4Q9H161 411 aaPredicted RBP7.93□□□□□ -1.14
VCAN-208ENST00000512590 GLIPR2Q9H4G4 154 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 SLIT2O94813 1529 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 IGSF23A1L1A6 192 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 CTLA4P16410 223 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 GZMKP49863 264 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 ERVK11-1P61568 191 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 RELQ04864 619 aaPredicted RBP7.93□□□□□ -1.14
VCAN-208ENST00000512590 TWIST1Q15672 202 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 ATP6V1FQ16864 119 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 SLC25A35Q3KQZ1 300 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 RBM45Q8IUH3 476 aaKnown RBP7.93□□□□□ -1.14
VCAN-208ENST00000512590 SVBPQ8N300 66 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 TMEM252Q8N6L7 170 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 KLHDC1Q8N7A1 406 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 TMEM99Q8N816 258 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 OR10C1Q96KK4 312 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 SPACA5Q96QH8 159 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 SMIM7Q9BQ49 75 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 SLC25A32Q9H2D1 315 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 TOMM7Q9P0U1 55 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 HIGD1AQ9Y241 93 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 PHLDA3Q9Y5J5 127 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 OOEPA6NGQ2 149 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 SDHDO14521 159 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 HPXP02790 462 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 HKR1P10072 659 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 FAM53BQ14153 422 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 CYB5R2Q6BCY4 276 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 NR2C2APQ86WQ0 139 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 GHSRQ92847 366 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 METTL17Q9H7H0 456 aaPredicted RBP7.93□□□□□ -1.14
VCAN-208ENST00000512590 SH2D2AQ9NP31 389 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 NKX2-8O15522 239 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 SRD5A1P18405 259 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 CEBPEQ15744 281 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 COL13A1Q5TAT6 717 aaPredicted RBP7.93□□□□□ -1.14
VCAN-208ENST00000512590 SELENOHQ8IZQ5 122 aaKnown RBP7.93□□□□□ -1.14
VCAN-208ENST00000512590 C16orf52Q8NHV5 167 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 LURAP1Q96LR2 239 aa7.93□□□□□ -1.14
VCAN-208ENST00000512590 KIF1AQ12756 1690 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 J3KTA2 159 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 ZNF735P0CB33 412 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 DAOP14920 347 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 RPL31P62899 125 aaKnown RBP7.92□□□□□ -1.14
VCAN-208ENST00000512590 EFNB1P98172 346 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 JOSD1Q15040 202 aaPredicted RBP7.92□□□□□ -1.14
VCAN-208ENST00000512590 TOR2AQ5JU69 321 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 DCAF10Q5QP82 559 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 CGB2Q6NT52 195 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 KLHDC9Q8NEP7 349 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 TMEM37Q8WXS4 190 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 SLC35B4Q969S0 331 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 SPSB2Q99619 263 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 IL25Q9H293 177 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 METTL1Q9UBP6 276 aaKnown RBP7.92□□□□□ -1.14
VCAN-208ENST00000512590 RBMY1BA6NDE4 496 aaKnown RBP7.92□□□□□ -1.14
VCAN-208ENST00000512590 RBMY1EA6NEQ0 496 aaKnown RBP7.92□□□□□ -1.14
VCAN-208ENST00000512590 H3BMH7 237 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 PRKNO60260 465 aaPredicted RBP7.92□□□□□ -1.14
VCAN-208ENST00000512590 SPINK4O60575 86 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 P01737 135 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 RBMY1DP0C7P1 496 aaKnown RBP7.92□□□□□ -1.14
VCAN-208ENST00000512590 RBMY1A1P0DJD3 496 aaKnown RBP7.92□□□□□ -1.14
VCAN-208ENST00000512590 RBMY1CP0DJD4 496 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 CR2P20023 1033 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 PLK5Q496M5 336 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 AGBL4Q5VU57 503 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 C10orf113Q5VZT2 155 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 ZNF534Q76KX8 674 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 PRSS48Q7RTY5 328 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 SLC25A46Q96AG3 418 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 UQCC1Q9NVA1 299 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 OR4C46A6NHA9 309 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 SAP30O75446 220 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 MMP11P24347 488 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 ISXQ2M1V0 245 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 CTU2Q2VPK5 515 aaKnown RBP7.92□□□□□ -1.14
VCAN-208ENST00000512590 KHDC1Q4VXA5 237 aaKnown RBP7.92□□□□□ -1.14
VCAN-208ENST00000512590 NKAIN4Q8IVV8 208 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 ARIH2OSQ8N7S6 290 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 BEND2Q8NDZ0 799 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 OR4C16Q8NGL9 310 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 ADAMTS17Q8TE56 1095 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 PRSS22Q9GZN4 317 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 C20orf27Q9GZN8 174 aa7.92□□□□□ -1.14
VCAN-208ENST00000512590 RAB33BQ9H082 229 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms