RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 FREM1Q5H8C1 2179 aa11.25□□□□□ -0.61
DEPDC1B-206ENST00000512452 CSPG4Q6UVK1 2322 aa11.25□□□□□ -0.61
DEPDC1B-206ENST00000512452 MED12LQ86YW9 2145 aa11.24□□□□□ -0.61
DEPDC1B-206ENST00000512452 FABP7O15540 132 aa11.24□□□□□ -0.61
DEPDC1B-206ENST00000512452 ANGPTL7O43827 346 aa11.24□□□□□ -0.61
DEPDC1B-206ENST00000512452 SMPD2O60906 423 aa11.24□□□□□ -0.61
DEPDC1B-206ENST00000512452 PDCD6O75340 191 aa11.24□□□□□ -0.61
DEPDC1B-206ENST00000512452 LYZL6O75951 148 aa11.24□□□□□ -0.61
DEPDC1B-206ENST00000512452 WISP2O76076 250 aa11.24□□□□□ -0.61
DEPDC1B-206ENST00000512452 OR4E1P0C645 316 aa11.24□□□□□ -0.61
DEPDC1B-206ENST00000512452 CXCL3P19876 107 aa11.24□□□□□ -0.61
DEPDC1B-206ENST00000512452 GABRR1P24046 479 aa11.24□□□□□ -0.61
DEPDC1B-206ENST00000512452 PER3P56645 1201 aa11.24□□□□□ -0.61
DEPDC1B-206ENST00000512452 RBM11P57052 281 aaKnown RBP11.24□□□□□ -0.61
DEPDC1B-206ENST00000512452 HLXQ14774 488 aaPredicted RBP11.24□□□□□ -0.61
DEPDC1B-206ENST00000512452 SURF2Q15527 256 aaPredicted RBP11.24□□□□□ -0.61
DEPDC1B-206ENST00000512452 GRK1Q15835 563 aa11.24□□□□□ -0.61
DEPDC1B-206ENST00000512452 MICBQ29980 383 aa11.24□□□□□ -0.61
DEPDC1B-206ENST00000512452 PLEKHN1Q494U1 663 aaPredicted RBP11.24□□□□□ -0.61
DEPDC1B-206ENST00000512452 OR52W1Q6IF63 320 aa11.24□□□□□ -0.61
DEPDC1B-206ENST00000512452 VWA1Q6PCB0 445 aa11.24□□□□□ -0.61
DEPDC1B-206ENST00000512452 SLC25A42Q86VD7 318 aa11.24□□□□□ -0.61
DEPDC1B-206ENST00000512452 WDR31Q8NA23 367 aa11.24□□□□□ -0.61
DEPDC1B-206ENST00000512452 TERB2Q8NHR7 220 aa11.24□□□□□ -0.61
DEPDC1B-206ENST00000512452 FAM57AQ8TBR7 257 aa11.24□□□□□ -0.61
DEPDC1B-206ENST00000512452 OR5P3Q8WZ94 311 aa11.24□□□□□ -0.61
DEPDC1B-206ENST00000512452 STARD4Q96DR4 205 aa11.24□□□□□ -0.61
DEPDC1B-206ENST00000512452 SLX1AQ9BQ83 275 aa11.24□□□□□ -0.61
DEPDC1B-206ENST00000512452 GON7Q9BXV9 100 aa11.24□□□□□ -0.61
DEPDC1B-206ENST00000512452 POFUT1Q9H488 388 aa11.24□□□□□ -0.61
DEPDC1B-206ENST00000512452 SLA2Q9H6Q3 261 aa11.24□□□□□ -0.61
DEPDC1B-206ENST00000512452 MGAT4CQ9UBM8 478 aa11.24□□□□□ -0.61
DEPDC1B-206ENST00000512452 KIAA1324LA8MWY0 1029 aaPredicted RBP11.23□□□□□ -0.61
DEPDC1B-206ENST00000512452 RGS11O94810 467 aa11.23□□□□□ -0.61
DEPDC1B-206ENST00000512452 IL2RAP01589 272 aa11.23□□□□□ -0.61
DEPDC1B-206ENST00000512452 IGLV1-44P01699 117 aa11.23□□□□□ -0.61
DEPDC1B-206ENST00000512452 GSTT2P0CG29 244 aa11.23□□□□□ -0.61
DEPDC1B-206ENST00000512452 FUT3P21217 361 aa11.23□□□□□ -0.61
DEPDC1B-206ENST00000512452 OR3A3P47888 321 aa11.23□□□□□ -0.61
DEPDC1B-206ENST00000512452 IDH3GP51553 393 aaPredicted RBP11.23□□□□□ -0.61
DEPDC1B-206ENST00000512452 SNU13P55769 128 aaKnown RBP11.23□□□□□ -0.61
DEPDC1B-206ENST00000512452 FGF12P61328 243 aa11.23□□□□□ -0.61
DEPDC1B-206ENST00000512452 PPP1CBP62140 327 aa11.23□□□□□ -0.61
DEPDC1B-206ENST00000512452 SRSF7Q16629 238 aaKnown RBP eCLIP11.23□□□□□ -0.61
DEPDC1B-206ENST00000512452 MPV17LQ2QL34 196 aa11.23□□□□□ -0.61
DEPDC1B-206ENST00000512452 SCGB2B2Q4G0G5 96 aa11.23□□□□□ -0.61
DEPDC1B-206ENST00000512452 C4orf46Q504U0 113 aa11.23□□□□□ -0.61
DEPDC1B-206ENST00000512452 DMRTC1Q5HYR2 192 aa11.23□□□□□ -0.61
DEPDC1B-206ENST00000512452 SIGIRRQ6IA17 410 aa11.23□□□□□ -0.61
DEPDC1B-206ENST00000512452 LPCAT3Q6P1A2 487 aa11.23□□□□□ -0.61
DEPDC1B-206ENST00000512452 SLC25A26Q70HW3 274 aa11.23□□□□□ -0.61
DEPDC1B-206ENST00000512452 CD163Q86VB7 1156 aa11.23□□□□□ -0.61
DEPDC1B-206ENST00000512452 FBXL14Q8N1E6 418 aa11.23□□□□□ -0.61
DEPDC1B-206ENST00000512452 OR2AK2Q8NG84 335 aa11.23□□□□□ -0.61
DEPDC1B-206ENST00000512452 OR5AP2Q8NGF4 316 aa11.23□□□□□ -0.61
DEPDC1B-206ENST00000512452 CAPSLQ8WWF8 208 aa11.23□□□□□ -0.61
DEPDC1B-206ENST00000512452 MICU1Q9BPX6 476 aa11.23□□□□□ -0.61
DEPDC1B-206ENST00000512452 SFXN3Q9BWM7 321 aa11.23□□□□□ -0.61
DEPDC1B-206ENST00000512452 ST3GAL6Q9Y274 331 aa11.23□□□□□ -0.61
DEPDC1B-206ENST00000512452 POM121CA8CG34 1229 aa11.22□□□□□ -0.61
DEPDC1B-206ENST00000512452 IQCF6A8MYZ5 107 aa11.22□□□□□ -0.61
DEPDC1B-206ENST00000512452 ZNF732B4DXR9 585 aa11.22□□□□□ -0.61
DEPDC1B-206ENST00000512452 PMP2P02689 132 aa11.22□□□□□ -0.61
DEPDC1B-206ENST00000512452 GLAP06280 429 aa11.22□□□□□ -0.61
DEPDC1B-206ENST00000512452 FPR2P25090 351 aa11.22□□□□□ -0.61
DEPDC1B-206ENST00000512452 CEACAM8P31997 349 aaPredicted RBP11.22□□□□□ -0.61
DEPDC1B-206ENST00000512452 UCP2P55851 309 aa11.22□□□□□ -0.61
DEPDC1B-206ENST00000512452 FOXF2Q12947 444 aa11.22□□□□□ -0.61
DEPDC1B-206ENST00000512452 IL24Q13007 206 aa11.22□□□□□ -0.61
DEPDC1B-206ENST00000512452 IL13RA2Q14627 380 aa11.22□□□□□ -0.61
DEPDC1B-206ENST00000512452 TAF9Q16594 264 aa11.22□□□□□ -0.61
DEPDC1B-206ENST00000512452 NKPD1Q17RQ9 610 aa11.22□□□□□ -0.61
DEPDC1B-206ENST00000512452 CHRFAM7AQ494W8 412 aa11.22□□□□□ -0.61
DEPDC1B-206ENST00000512452 SEM1Q6ZVN7 128 aa11.22□□□□□ -0.61
DEPDC1B-206ENST00000512452 NLRC3Q7RTR2 1065 aa11.22□□□□□ -0.61
DEPDC1B-206ENST00000512452 BHLHA15Q7RTS1 189 aaPredicted RBP11.22□□□□□ -0.61
DEPDC1B-206ENST00000512452 C6orf201Q7Z4U5 140 aa11.22□□□□□ -0.61
DEPDC1B-206ENST00000512452 RTN4RL2Q86UN3 420 aa11.22□□□□□ -0.61
DEPDC1B-206ENST00000512452 LHFPL1Q86WI0 220 aa11.22□□□□□ -0.61
DEPDC1B-206ENST00000512452 CALHM1Q8IU99 346 aa11.22□□□□□ -0.61
DEPDC1B-206ENST00000512452 MUC20Q8N307 709 aaPredicted RBP11.22□□□□□ -0.61
DEPDC1B-206ENST00000512452 C12orf45Q8N5I9 185 aaPredicted RBP11.22□□□□□ -0.61
DEPDC1B-206ENST00000512452 DHRS9Q9BPW9 319 aa11.22□□□□□ -0.61
DEPDC1B-206ENST00000512452 CMSS1Q9BQ75 279 aaKnown RBP11.22□□□□□ -0.61
DEPDC1B-206ENST00000512452 RTL8AQ9BWD3 113 aa11.22□□□□□ -0.61
DEPDC1B-206ENST00000512452 TMPRSS13Q9BYE2 586 aa11.22□□□□□ -0.61
DEPDC1B-206ENST00000512452 FGF23Q9GZV9 251 aaPredicted RBP11.22□□□□□ -0.61
DEPDC1B-206ENST00000512452 PPA2Q9H2U2 334 aa11.22□□□□□ -0.61
DEPDC1B-206ENST00000512452 SPACA1Q9HBV2 294 aa11.22□□□□□ -0.61
DEPDC1B-206ENST00000512452 VSIG4Q9Y279 399 aa11.22□□□□□ -0.61
DEPDC1B-206ENST00000512452 OR5H1A6NKK0 313 aa11.21□□□□□ -0.61
DEPDC1B-206ENST00000512452 OR2AT4A6NND4 320 aa11.21□□□□□ -0.61
DEPDC1B-206ENST00000512452 TRAPPC2LH3BP13 241 aa11.21□□□□□ -0.61
DEPDC1B-206ENST00000512452 J3QT63 122 aa11.21□□□□□ -0.61
DEPDC1B-206ENST00000512452 GEMIN2O14893 280 aaKnown RBP11.21□□□□□ -0.61
DEPDC1B-206ENST00000512452 PLATP00750 562 aa11.21□□□□□ -0.61
DEPDC1B-206ENST00000512452 SFTPBP07988 381 aa11.21□□□□□ -0.61
DEPDC1B-206ENST00000512452 ZNF35P13682 527 aa11.21□□□□□ -0.61
DEPDC1B-206ENST00000512452 HLA-GP17693 338 aa11.21□□□□□ -0.61
DEPDC1B-206ENST00000512452 ZBTB25P24278 435 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms