RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 TCTEX1D4Q5JR98 221 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 TEDDM1Q5T9Z0 273 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 XAF1Q6GPH4 301 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 GUSBP11Q6P575 273 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 C12orf54Q6X4T0 127 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 RNF165Q6ZSG1 346 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 GKN2Q86XP6 184 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 ZNF676Q8N7Q3 588 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 STPG3Q8N7X2 389 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 OR4N2Q8NGD1 307 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 OR4K1Q8NGD4 311 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 HAVCR2Q8TDQ0 301 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 WBP1Q96G27 269 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 RBP7Q96R05 134 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 NRTNQ99748 197 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 KRTAP17-1Q9BYP8 105 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 REG4Q9BYZ8 158 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 FAM206AQ9NX38 181 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 OPTCQ9UBM4 332 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 A0A087WUJ7 227 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 A0A0G2JNJ9 132 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 PNMA8CA0A1B0GUJ8 204 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 A8MXK9 166 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 SH2D1BO14796 132 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 TAPBPO15533 448 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 ERI3O43414 337 aaKnown RBP4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 PRKNO60260 465 aaPredicted RBP4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 C1orf105O95561 183 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 UMODP07911 640 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 IRF2P14316 349 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 GPX3P22352 226 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 SSTR4P31391 388 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 PYCR1P32322 319 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 LEPP41159 167 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 EVX1P49640 407 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 XGP55808 180 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 WNT4P56705 351 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 TCTAP57738 103 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 RPS4XP62701 263 aaKnown RBP4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 ARG2P78540 354 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 ID2Q02363 134 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 SNAI3Q3KNW1 292 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 ACSF3Q4G176 576 aaPredicted RBP4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 NCMAPQ5T1S8 102 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 MBOAT2Q6ZWT7 520 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 SHFQ7M4L6 423 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 TCF24Q7RTU0 167 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 DOLPP1Q86YN1 238 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 WFDC8Q8IUA0 241 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 MMD2Q8IY49 270 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 WDR31Q8NA23 367 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 MCFD2Q8NI22 146 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 HPSE2Q8WWQ2 592 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 S1PR3Q99500 378 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 SLIRPQ9GZT3 109 aaKnown RBP4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 PLAC1Q9HBJ0 212 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 SPANXB1Q9NS25 103 aaPredicted RBP4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 DLL3Q9NYJ7 618 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 ELOVL5Q9NYP7 299 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 Q9UFV3 132 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 ASXL3Q9C0F0 2248 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 ARID1BQ8NFD5 2236 aaPredicted RBP4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 FAM231BA6NCW3 169 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 CLIC1O00299 241 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 COPEO14579 308 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 TPST1O60507 370 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 HPNP05981 417 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 GLI4P10075 376 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 SNRPBP14678 240 aaKnown RBP4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 RAB3BP20337 219 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 MAOAP21397 527 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 RPS3P23396 243 aaKnown RBP eCLIP4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 NTSP30990 170 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 POLR2IP36954 125 aaKnown RBP4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 AVPR1BP47901 424 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 GABARAPL2P60520 117 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 PNRC1Q12796 327 aaPredicted RBP4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 GAGE5Q13069 117 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 GAGE6Q13070 117 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 KLF5Q13887 457 aaPredicted RBP4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 CDSNQ15517 529 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 ISXQ2M1V0 245 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 ZNF404Q494X3 552 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 CDNFQ49AH0 187 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 ELFN2Q5R3F8 820 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 CPTPQ5TA50 214 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 TMEM236Q5W0B7 351 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 RASSF6Q6ZTQ3 369 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 DTX2Q86UW9 622 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 SLC30A8Q8IWU4 369 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 C8orf59Q8N0T1 100 aaPredicted RBP4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 LRRC25Q8N386 305 aaPredicted RBP4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 OR4D9Q8NGE8 314 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 C16orf52Q8NHV5 167 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 HMGCLL1Q8TB92 370 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 SLC37A2Q8TED4 501 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 SMAP2Q8WU79 429 aaPredicted RBP4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 BTF3L4Q96K17 158 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 COL21A1Q96P44 957 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 CLCC1Q96S66 551 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms