RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 ZNF607Q96SK3 696 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 GPA33Q99795 319 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 ZNF251Q9BRH9 671 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 DCUN1D5Q9BTE7 237 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 MRPL13Q9BYD1 178 aaKnown RBP4.09□□□□□ -1.75
NEK1-204ENST00000509912 DPY30Q9C005 99 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 RAB1BQ9H0U4 201 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 PPA2Q9H2U2 334 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 NANOGQ9H9S0 305 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 RHOFQ9HBH0 211 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 PLSCR3Q9NRY6 295 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 MED11Q9P086 117 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 MIOXQ9UGB7 285 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 MLXQ9UH92 298 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 ZNF443Q9Y2A4 671 aaPredicted RBP4.09□□□□□ -1.75
NEK1-204ENST00000509912 STARD10Q9Y365 291 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 U3KQV3 271 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 A0A0B4J2E0 115 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 A0A1B0GX12 115 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 A0A1W2PR80 420 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 EFCAB10A6NFE3 127 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 MFSD2BA6NFX1 497 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 ZNF729A6NN14 1252 aaPredicted RBP4.09□□□□□ -1.75
NEK1-204ENST00000509912 AKR7A2O43488 359 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 CHP2O43745 196 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 GPRIN2O60269 458 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 IGHV3-13P01766 116 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 IGFBP1P08833 259 aaPredicted RBP4.09□□□□□ -1.75
NEK1-204ENST00000509912 ZNF14P17017 642 aaPredicted RBP4.09□□□□□ -1.75
NEK1-204ENST00000509912 RAB4AP20338 218 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 LAP3P28838 519 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 S100A3P33764 101 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 MTPNP58546 118 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 RAB4BP61018 213 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 FOXF1Q12946 379 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 CHRFAM7AQ494W8 412 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 PAN3Q58A45 887 aaKnown RBP4.09□□□□□ -1.75
NEK1-204ENST00000509912 SPANXN4Q5MJ08 99 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 C6orf52Q5T4I8 152 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 ZFP1Q6P2D0 407 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 FAM122BQ7Z309 247 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 GPR151Q8TDV0 419 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 CANT1Q8WVQ1 401 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 UFD1Q92890 307 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 FBXO17Q96EF6 278 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 TNFRSF13CQ96RJ3 184 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 EBPLQ9BY08 206 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 SRXN1Q9BYN0 137 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 NIT2Q9NQR4 276 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 PLCXD1Q9NUJ7 323 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 ABCD2Q9UBJ2 740 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 RIMS3Q9UJD0 308 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 ZNF391Q9UJN7 358 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 AP4S1Q9Y587 144 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 V9GYQ6 96 aa4.09□□□□□ -1.75
NEK1-204ENST00000509912 ZNF469Q96JG9 3925 aaPredicted RBP4.09□□□□□ -1.76
NEK1-204ENST00000509912 FAM220BPB1ANY3 271 aa4.08□□□□□ -1.76
NEK1-204ENST00000509912 TPST1O60507 370 aa4.08□□□□□ -1.76
NEK1-204ENST00000509912 GAGE7O76087 117 aa4.08□□□□□ -1.76
NEK1-204ENST00000509912 SERPINA5P05154 406 aa4.08□□□□□ -1.76
NEK1-204ENST00000509912 FRMD6-AS1P0C7T7 363 aa4.08□□□□□ -1.76
NEK1-204ENST00000509912 GAGE12FP0CL80 117 aa4.08□□□□□ -1.76
NEK1-204ENST00000509912 GAGE12GP0CL81 117 aa4.08□□□□□ -1.76
NEK1-204ENST00000509912 GAGE12IP0CL82 117 aa4.08□□□□□ -1.76
NEK1-204ENST00000509912 LAMP1P11279 417 aa4.08□□□□□ -1.76
NEK1-204ENST00000509912 S100PP25815 95 aa4.08□□□□□ -1.76
NEK1-204ENST00000509912 GPR4P46093 362 aa4.08□□□□□ -1.76
NEK1-204ENST00000509912 GSK3BP49841 420 aa4.08□□□□□ -1.76
NEK1-204ENST00000509912 PCBD1P61457 104 aa4.08□□□□□ -1.76
NEK1-204ENST00000509912 ERVK-25P63136 954 aa4.08□□□□□ -1.76
NEK1-204ENST00000509912 HBA1P69905 142 aa4.08□□□□□ -1.76
NEK1-204ENST00000509912 GAGE1Q13065 139 aa4.08□□□□□ -1.76
NEK1-204ENST00000509912 GAGE4Q13068 117 aa4.08□□□□□ -1.76
NEK1-204ENST00000509912 PDZK1IP1Q13113 114 aa4.08□□□□□ -1.76
NEK1-204ENST00000509912 KLF5Q13887 457 aaPredicted RBP4.08□□□□□ -1.76
NEK1-204ENST00000509912 RFX4Q33E94 735 aa4.08□□□□□ -1.76
NEK1-204ENST00000509912 OGFRL1Q5TC84 451 aaPredicted RBP4.08□□□□□ -1.76
NEK1-204ENST00000509912 RSBN1Q5VWQ0 802 aaPredicted RBP4.08□□□□□ -1.76
NEK1-204ENST00000509912 NCR3LG1Q68D85 454 aa4.08□□□□□ -1.76
NEK1-204ENST00000509912 REEP3Q6NUK4 255 aa4.08□□□□□ -1.76
NEK1-204ENST00000509912 METAP1DQ6UB28 335 aaPredicted RBP4.08□□□□□ -1.76
NEK1-204ENST00000509912 SLC16A13Q7RTY0 426 aa4.08□□□□□ -1.76
NEK1-204ENST00000509912 ZNF519Q8TB69 540 aa4.08□□□□□ -1.76
NEK1-204ENST00000509912 RAB40CQ96S21 281 aa4.08□□□□□ -1.76
NEK1-204ENST00000509912 KCTD14Q9BQ13 255 aaPredicted RBP4.08□□□□□ -1.76
NEK1-204ENST00000509912 OR51M1Q9H341 326 aa4.08□□□□□ -1.76
NEK1-204ENST00000509912 ADGRL4Q9HBW9 690 aa4.08□□□□□ -1.76
NEK1-204ENST00000509912 MAN2C1Q9NTJ4 1040 aa4.08□□□□□ -1.76
NEK1-204ENST00000509912 ERVK-18Q9QC07 812 aa4.08□□□□□ -1.76
NEK1-204ENST00000509912 WDR45Q9Y484 360 aa4.08□□□□□ -1.76
NEK1-204ENST00000509912 PPIAL4AQ9Y536 164 aa4.08□□□□□ -1.76
NEK1-204ENST00000509912 PCNX3Q9H6A9 2034 aa4.08□□□□□ -1.76
NEK1-204ENST00000509912 DNHD1Q96M86 4753 aa4.08□□□□□ -1.76
NEK1-204ENST00000509912 TCRBV3S1A0A5B6 114 aa4.08□□□□□ -1.76
NEK1-204ENST00000509912 TMEM72A0PK05 275 aa4.08□□□□□ -1.76
NEK1-204ENST00000509912 ZNF99A8MXY4 864 aaPredicted RBP4.08□□□□□ -1.76
NEK1-204ENST00000509912 FAM25AB3EWG3 89 aa4.08□□□□□ -1.76
NEK1-204ENST00000509912 FAM25CB3EWG5 89 aa4.08□□□□□ -1.76
NEK1-204ENST00000509912 FAM25GB3EWG6 89 aa4.08□□□□□ -1.76
NEK1-204ENST00000509912 I3L521 148 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms