RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 FGGYQ96C11 551 aa12.43□□□□□ -0.42
TPM3-219ENST00000509409 CENPNQ96H22 339 aaPredicted RBP12.43□□□□□ -0.42
TPM3-219ENST00000509409 CDCA4Q9BXL8 241 aa12.43□□□□□ -0.42
TPM3-219ENST00000509409 PRSS22Q9GZN4 317 aa12.43□□□□□ -0.42
TPM3-219ENST00000509409 ZNF702PQ9H963 129 aa12.43□□□□□ -0.42
TPM3-219ENST00000509409 IMPAD1Q9NX62 359 aa12.43□□□□□ -0.42
TPM3-219ENST00000509409 OAZ3Q9UMX2 235 aa12.43□□□□□ -0.42
TPM3-219ENST00000509409 HILPDAQ9Y5L2 63 aa12.43□□□□□ -0.42
TPM3-219ENST00000509409 A6NDX4 124 aa12.42□□□□□ -0.42
TPM3-219ENST00000509409 ODF3BA8MYP8 253 aa12.42□□□□□ -0.42
TPM3-219ENST00000509409 F2RL2O00254 374 aa12.42□□□□□ -0.42
TPM3-219ENST00000509409 FBXO24O75426 580 aa12.42□□□□□ -0.42
TPM3-219ENST00000509409 CIB2O75838 187 aa12.42□□□□□ -0.42
TPM3-219ENST00000509409 IGHA1P01876 353 aa12.42□□□□□ -0.42
TPM3-219ENST00000509409 OPN1MWP04001 364 aa12.42□□□□□ -0.42
TPM3-219ENST00000509409 OPN1MW2P0DN77 364 aa12.42□□□□□ -0.42
TPM3-219ENST00000509409 OPN1MW3P0DN78 364 aa12.42□□□□□ -0.42
TPM3-219ENST00000509409 PRKACAP17612 351 aa12.42□□□□□ -0.42
TPM3-219ENST00000509409 ATF1P18846 271 aa12.42□□□□□ -0.42
TPM3-219ENST00000509409 BCL3P20749 454 aa12.42□□□□□ -0.42
TPM3-219ENST00000509409 PRKACBP22694 351 aa12.42□□□□□ -0.42
TPM3-219ENST00000509409 KIR3DL2P43630 455 aa12.42□□□□□ -0.42
TPM3-219ENST00000509409 NPBWR2P48146 333 aa12.42□□□□□ -0.42
TPM3-219ENST00000509409 ACTA2P62736 377 aa12.42□□□□□ -0.42
TPM3-219ENST00000509409 ACTG2P63267 376 aa12.42□□□□□ -0.42
TPM3-219ENST00000509409 ACTC1P68032 377 aa12.42□□□□□ -0.42
TPM3-219ENST00000509409 ACTA1P68133 377 aa12.42□□□□□ -0.42
TPM3-219ENST00000509409 ZNF85Q03923 595 aa12.42□□□□□ -0.42
TPM3-219ENST00000509409 EMX1Q04741 257 aaPredicted RBP12.42□□□□□ -0.42
TPM3-219ENST00000509409 TRAPPC6BQ86SZ2 158 aa12.42□□□□□ -0.42
TPM3-219ENST00000509409 OR52N4Q8NGI2 321 aa12.42□□□□□ -0.42
TPM3-219ENST00000509409 OR5M11Q96RB7 305 aa12.42□□□□□ -0.42
TPM3-219ENST00000509409 GABARAPL3Q9BY60 117 aa12.42□□□□□ -0.42
TPM3-219ENST00000509409 RBFOX1Q9NWB1 397 aaKnown RBP12.42□□□□□ -0.42
TPM3-219ENST00000509409 IL36RNQ9UBH0 155 aa12.42□□□□□ -0.42
TPM3-219ENST00000509409 ORC6Q9Y5N6 252 aa12.42□□□□□ -0.42
TPM3-219ENST00000509409 SESN1Q9Y6P5 492 aa12.42□□□□□ -0.42
TPM3-219ENST00000509409 TET2Q6N021 2002 aaPredicted RBP12.42□□□□□ -0.42
TPM3-219ENST00000509409 PRKDCP78527 4128 aaKnown RBP12.42□□□□□ -0.42
TPM3-219ENST00000509409 DAPL1A0PJW8 107 aa12.41□□□□□ -0.42
TPM3-219ENST00000509409 CD28P10747 220 aa12.41□□□□□ -0.42
TPM3-219ENST00000509409 ZNF91Q05481 1191 aa12.41□□□□□ -0.42
TPM3-219ENST00000509409 MINOS1Q5TGZ0 78 aa12.41□□□□□ -0.42
TPM3-219ENST00000509409 KCTD20Q7Z5Y7 419 aa12.41□□□□□ -0.42
TPM3-219ENST00000509409 DNAAF1Q8NEP3 725 aa12.41□□□□□ -0.42
TPM3-219ENST00000509409 OR2G2Q8NGZ5 317 aa12.41□□□□□ -0.42
TPM3-219ENST00000509409 ADAT3Q96EY9 351 aaPredicted RBP12.41□□□□□ -0.42
TPM3-219ENST00000509409 OSBPL10Q9BXB5 764 aa12.41□□□□□ -0.42
TPM3-219ENST00000509409 LINC00312Q9Y6C7 94 aa12.41□□□□□ -0.42
TPM3-219ENST00000509409 MINOS1-NBL1R4GNA1 71 aa12.41□□□□□ -0.42
TPM3-219ENST00000509409 IGHV2-26A0A0B4J1V2 119 aa12.4□□□□□ -0.42
TPM3-219ENST00000509409 TRBV2A0A0J9YWF9 115 aa12.4□□□□□ -0.42
TPM3-219ENST00000509409 SIRPB1O00241 398 aa12.4□□□□□ -0.42
TPM3-219ENST00000509409 SH2D1BO14796 132 aa12.4□□□□□ -0.42
TPM3-219ENST00000509409 MGST3O14880 152 aa12.4□□□□□ -0.42
TPM3-219ENST00000509409 PSPNO60542 156 aa12.4□□□□□ -0.42
TPM3-219ENST00000509409 ENTPD6O75354 484 aa12.4□□□□□ -0.42
TPM3-219ENST00000509409 HTR1AP08908 422 aa12.4□□□□□ -0.42
TPM3-219ENST00000509409 AZGP1P25311 298 aaKnown RBP12.4□□□□□ -0.42
TPM3-219ENST00000509409 PDZK1IP1Q13113 114 aa12.4□□□□□ -0.42
TPM3-219ENST00000509409 LDLRAD2Q5SZI1 272 aa12.4□□□□□ -0.42
TPM3-219ENST00000509409 ZBTB49Q6ZSB9 765 aa12.4□□□□□ -0.42
TPM3-219ENST00000509409 LHFPL2Q6ZUX7 228 aa12.4□□□□□ -0.42
TPM3-219ENST00000509409 OR4S1Q8NGB4 309 aa12.4□□□□□ -0.42
TPM3-219ENST00000509409 TRUB1Q8WWH5 349 aaKnown RBP12.4□□□□□ -0.42
TPM3-219ENST00000509409 RFT1Q96AA3 541 aa12.4□□□□□ -0.42
TPM3-219ENST00000509409 RNFT2Q96EX2 444 aa12.4□□□□□ -0.42
TPM3-219ENST00000509409 CLEC7AQ9BXN2 247 aa12.4□□□□□ -0.42
TPM3-219ENST00000509409 TMEM133Q9H2Q1 129 aa12.4□□□□□ -0.42
TPM3-219ENST00000509409 SEBOXQ9HB31 216 aaPredicted RBP12.4□□□□□ -0.42
TPM3-219ENST00000509409 SERTAD4Q9NUC0 356 aa12.4□□□□□ -0.42
TPM3-219ENST00000509409 FAM53CQ9NYF3 392 aa12.4□□□□□ -0.42
TPM3-219ENST00000509409 GSTK1Q9Y2Q3 226 aa12.4□□□□□ -0.42
TPM3-219ENST00000509409 IGKV1-9A0A0C4DH69 117 aa12.39□□□□□ -0.43
TPM3-219ENST00000509409 MEGF11A6BM72 1044 aa12.39□□□□□ -0.43
TPM3-219ENST00000509409 J3QLW9 94 aa12.39□□□□□ -0.43
TPM3-219ENST00000509409 ZNF19P17023 458 aa12.39□□□□□ -0.43
TPM3-219ENST00000509409 JUNBP17275 347 aaPredicted RBP12.39□□□□□ -0.43
TPM3-219ENST00000509409 VDAC2P45880 294 aaPredicted RBP12.39□□□□□ -0.43
TPM3-219ENST00000509409 ISL1P61371 349 aa12.39□□□□□ -0.43
TPM3-219ENST00000509409 BLCAPP62952 87 aa12.39□□□□□ -0.43
TPM3-219ENST00000509409 SCN1BQ07699 218 aa12.39□□□□□ -0.43
TPM3-219ENST00000509409 ZNF146Q15072 292 aa12.39□□□□□ -0.43
TPM3-219ENST00000509409 BEAN1Q3B7T3 259 aa12.39□□□□□ -0.43
TPM3-219ENST00000509409 UTS2BQ765I0 119 aa12.39□□□□□ -0.43
TPM3-219ENST00000509409 TCF23Q7RTU1 214 aa12.39□□□□□ -0.43
TPM3-219ENST00000509409 Q8N2B8 174 aa12.39□□□□□ -0.43
TPM3-219ENST00000509409 OR13C3Q8NGS6 347 aa12.39□□□□□ -0.43
TPM3-219ENST00000509409 STMN2Q93045 179 aa12.39□□□□□ -0.43
TPM3-219ENST00000509409 R3HDM4Q96D70 268 aa12.39□□□□□ -0.43
TPM3-219ENST00000509409 OPALINQ96PE5 141 aa12.39□□□□□ -0.43
TPM3-219ENST00000509409 NEK6Q9HC98 313 aa12.39□□□□□ -0.43
TPM3-219ENST00000509409 EXOSC4Q9NPD3 245 aaKnown RBP12.39□□□□□ -0.43
TPM3-219ENST00000509409 FRRS1LQ9P0K9 344 aa12.39□□□□□ -0.43
TPM3-219ENST00000509409 PCDHGB5Q9Y5G0 923 aa12.39□□□□□ -0.43
TPM3-219ENST00000509409 TRGV10A0A0A0MS01 117 aa12.38□□□□□ -0.43
TPM3-219ENST00000509409 FUOMA2VDF0 154 aa12.38□□□□□ -0.43
TPM3-219ENST00000509409 PRB2P02812 416 aaPredicted RBP12.38□□□□□ -0.43
TPM3-219ENST00000509409 ALDOBP05062 364 aa12.38□□□□□ -0.43
TPM3-219ENST00000509409 HTR1DP28221 377 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms