RNA–Protein interactions for RNA: ENST00000508604.5

NUP54-208, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-208ENST00000508604 RNF148Q8N7C7 305 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 BPIFB6Q8NFQ5 453 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 OR2AP1Q8NGE2 309 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 OR13C4Q8NGS5 318 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 OR13C8Q8NGS7 320 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 OR10R2Q8NGX6 335 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 OR6K3Q8NGY3 331 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 OR10A6Q8NH74 314 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 NUBPLQ8TB37 319 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 GPR151Q8TDV0 419 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 CASTOR1Q8WTX7 329 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 CYGBQ8WWM9 190 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 MRPS31Q92665 395 aaKnown RBP1.36□□□□□ -2.19
NUP54-208ENST00000508604 TFGQ92734 400 aaPredicted RBP1.36□□□□□ -2.19
NUP54-208ENST00000508604 RORBQ92753 470 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 EMG1Q92979 244 aaKnown RBP1.36□□□□□ -2.19
NUP54-208ENST00000508604 PTH2Q96A98 100 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 TMEM45BQ96B21 275 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 ROPN1LQ96C74 230 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 RPUSD4Q96CM3 377 aaKnown RBP1.36□□□□□ -2.19
NUP54-208ENST00000508604 CMTM5Q96DZ9 223 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 CPNE2Q96FN4 548 aaPredicted RBP1.36□□□□□ -2.19
NUP54-208ENST00000508604 DEFB118Q96PH6 123 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 TSSK3Q96PN8 268 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 RNF157Q96PX1 679 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 OR8B4Q96RC9 309 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 CMSS1Q9BQ75 279 aaKnown RBP1.36□□□□□ -2.19
NUP54-208ENST00000508604 SULT4A1Q9BR01 284 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 TIMM29Q9BSF4 260 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 TMEM43Q9BTV4 400 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 CHST5Q9GZS9 411 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 MAGT1Q9H0U3 335 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 TLNRD1Q9H1K6 362 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 OR2AG1Q9H205 316 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 DSN1Q9H410 356 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 TUBA4BQ9H853 241 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 NHEJ1Q9H9Q4 299 aaPredicted RBP1.36□□□□□ -2.19
NUP54-208ENST00000508604 BEX1Q9HBH7 125 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 LYRM4Q9HD34 91 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 SLCO1B3Q9NPD5 702 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 ESM1Q9NQ30 184 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 FBXL12Q9NXK8 326 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 TAS2R13Q9NYV9 303 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 CNOT2Q9NZN8 540 aaKnown RBP1.36□□□□□ -2.19
NUP54-208ENST00000508604 VPS29Q9UBQ0 182 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 MRM2Q9UI43 246 aaKnown RBP1.36□□□□□ -2.19
NUP54-208ENST00000508604 ZNF391Q9UJN7 358 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 EMCNQ9ULC0 261 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 RNF11Q9Y3C5 154 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 PALLDQ8WX93 1383 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 DENND4BO75064 1496 aaPredicted RBP1.36□□□□□ -2.19
NUP54-208ENST00000508604 RPRD2Q5VT52 1461 aaKnown RBP1.36□□□□□ -2.19
NUP54-208ENST00000508604 ATP7AQ04656 1500 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 MAGI3Q5TCQ9 1506 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 ADCY10Q96PN6 1610 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 CC2D2AQ9P2K1 1620 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 QRICH2Q9H0J4 1663 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 ITSN1Q15811 1721 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 BCORL1Q5H9F3 1711 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 NALCNQ8IZF0 1738 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 TRPM3Q9HCF6 1732 aaPredicted RBP1.36□□□□□ -2.19
NUP54-208ENST00000508604 PTPRFP10586 1907 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 TUBGCP6Q96RT7 1819 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 IFT172Q9UG01 1749 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 CAMSAP1Q5T5Y3 1602 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 ABCA6Q8N139 1617 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 MROH1Q8NDA8 1641 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 GPATCH8Q9UKJ3 1502 aaKnown RBP1.36□□□□□ -2.19
NUP54-208ENST00000508604 NOS1P29475 1434 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 FLT4P35916 1363 aa1.36□□□□□ -2.19
NUP54-208ENST00000508604 TRAV26-1A0A087WT03 109 aa1.35□□□□□ -2.19
NUP54-208ENST00000508604 A0A096LPI6 279 aa1.35□□□□□ -2.19
NUP54-208ENST00000508604 TRAV39A0A0B4J263 110 aa1.35□□□□□ -2.19
NUP54-208ENST00000508604 A0A1B0GVI7 797 aa1.35□□□□□ -2.19
NUP54-208ENST00000508604 TRAPPC13A5PLN9 417 aa1.35□□□□□ -2.19
NUP54-208ENST00000508604 PRORSD1PA6NEY8 169 aa1.35□□□□□ -2.19
NUP54-208ENST00000508604 ARL5CA6NH57 179 aa1.35□□□□□ -2.19
NUP54-208ENST00000508604 OR5H14A6NHG9 310 aa1.35□□□□□ -2.19
NUP54-208ENST00000508604 FAM74A7A6NL05 159 aa1.35□□□□□ -2.19
NUP54-208ENST00000508604 D6RAR5 112 aa1.35□□□□□ -2.19
NUP54-208ENST00000508604 F6UZH7 168 aa1.35□□□□□ -2.19
NUP54-208ENST00000508604 CLDN34H7C241 214 aa1.35□□□□□ -2.19
NUP54-208ENST00000508604 SLC17A3O00476 420 aa1.35□□□□□ -2.19
NUP54-208ENST00000508604 CYB561D2O14569 222 aa1.35□□□□□ -2.19
NUP54-208ENST00000508604 XRCC2O43543 280 aa1.35□□□□□ -2.19
NUP54-208ENST00000508604 SSNA1O43805 119 aa1.35□□□□□ -2.19
NUP54-208ENST00000508604 PDE6DO43924 150 aa1.35□□□□□ -2.19
NUP54-208ENST00000508604 CDC40O60508 579 aaKnown RBP eCLIP1.35□□□□□ -2.19
NUP54-208ENST00000508604 HPGDSO60760 199 aa1.35□□□□□ -2.19
NUP54-208ENST00000508604 ADAP1O75689 374 aa1.35□□□□□ -2.19
NUP54-208ENST00000508604 OR2F2O95006 317 aa1.35□□□□□ -2.19
NUP54-208ENST00000508604 GABARAPO95166 117 aa1.35□□□□□ -2.19
NUP54-208ENST00000508604 SYNGR4O95473 234 aa1.35□□□□□ -2.19
NUP54-208ENST00000508604 MT-CO2P00403 227 aa1.35□□□□□ -2.19
NUP54-208ENST00000508604 APOC3P02656 99 aa1.35□□□□□ -2.19
NUP54-208ENST00000508604 MT-ND4LP03901 98 aa1.35□□□□□ -2.19
NUP54-208ENST00000508604 CD2P06729 351 aa1.35□□□□□ -2.19
NUP54-208ENST00000508604 DCNP07585 359 aaKnown RBP1.35□□□□□ -2.19
NUP54-208ENST00000508604 UCHL1P09936 223 aa1.35□□□□□ -2.19
NUP54-208ENST00000508604 OR56A5P0C7T3 313 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms