RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 OR51A2Q8NGJ7 313 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 OR5D18Q8NGL1 313 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 NANPQ8TBE9 248 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 TMEM203Q969S6 136 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 RFT1Q96AA3 541 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 MRPS24Q96EL2 167 aaKnown RBP7.6□□□□□ -1.19
NUP54-207ENST00000508583 SPACA5Q96QH8 159 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 NUDT16L1Q9BRJ7 211 aaKnown RBP7.6□□□□□ -1.19
NUP54-207ENST00000508583 C7orf69Q9H7B7 122 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 HMG20AQ9NP66 347 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 IL36GQ9NZH8 169 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 CTSZQ9UBR2 303 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 GHRLQ9UBU3 117 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 OR14J1Q9UGF5 321 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 ZNF222Q9UK12 451 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 INSIG2Q9Y5U4 225 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 AUP1Q9Y679 476 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 NSD1Q96L73 2696 aaPredicted RBP7.6□□□□□ -1.19
NUP54-207ENST00000508583 NAV3Q8IVL0 2385 aa7.59□□□□□ -1.19
NUP54-207ENST00000508583 TRAV8-7A0A075B6U6 113 aa7.59□□□□□ -1.19
NUP54-207ENST00000508583 KIR2DS1A0A191URI9 304 aa7.59□□□□□ -1.19
NUP54-207ENST00000508583 hCG_1809904A0A1W2PP81 198 aa7.59□□□□□ -1.19
NUP54-207ENST00000508583 A0A1W2PPE2 198 aa7.59□□□□□ -1.19
NUP54-207ENST00000508583 A0A1W2PPK0 400 aa7.59□□□□□ -1.19
NUP54-207ENST00000508583 A0A1W2PR64 198 aa7.59□□□□□ -1.19
NUP54-207ENST00000508583 A0A1W2PRV1 198 aa7.59□□□□□ -1.19
NUP54-207ENST00000508583 FUOMA2VDF0 154 aa7.59□□□□□ -1.19
NUP54-207ENST00000508583 GABRPO00591 440 aa7.59□□□□□ -1.19
NUP54-207ENST00000508583 ANGPTL7O43827 346 aa7.59□□□□□ -1.19
NUP54-207ENST00000508583 HAND1O96004 215 aa7.59□□□□□ -1.19
NUP54-207ENST00000508583 FAM157CP0CG43 387 aa7.59□□□□□ -1.19
NUP54-207ENST00000508583 UBBP0CG47 229 aa7.59□□□□□ -1.19
NUP54-207ENST00000508583 GTF2F2P13984 249 aa7.59□□□□□ -1.19
NUP54-207ENST00000508583 SRMP19623 302 aa7.59□□□□□ -1.19
NUP54-207ENST00000508583 IL13RA2Q14627 380 aa7.59□□□□□ -1.19
NUP54-207ENST00000508583 TIMM50Q3ZCQ8 353 aa7.59□□□□□ -1.19
NUP54-207ENST00000508583 METTL11BQ5VVY1 283 aa7.59□□□□□ -1.19
NUP54-207ENST00000508583 AWAT2Q6E213 333 aa7.59□□□□□ -1.19
NUP54-207ENST00000508583 BTN2A1Q7KYR7 527 aa7.59□□□□□ -1.19
NUP54-207ENST00000508583 KIR3DL3Q8N743 410 aa7.59□□□□□ -1.19
NUP54-207ENST00000508583 ASCC1Q8N9N2 400 aaKnown RBP7.59□□□□□ -1.19
NUP54-207ENST00000508583 H1FXQ92522 213 aaKnown RBP7.59□□□□□ -1.19
NUP54-207ENST00000508583 SEH1LQ96EE3 360 aa7.59□□□□□ -1.19
NUP54-207ENST00000508583 ZNF488Q96MN9 340 aa7.59□□□□□ -1.19
NUP54-207ENST00000508583 GAFA1Q96PS6 74 aa7.59□□□□□ -1.19
NUP54-207ENST00000508583 NR1H4Q96RI1 486 aaPredicted RBP7.59□□□□□ -1.19
NUP54-207ENST00000508583 CST11Q9H112 138 aa7.59□□□□□ -1.19
NUP54-207ENST00000508583 EXOSC4Q9NPD3 245 aaKnown RBP7.59□□□□□ -1.19
NUP54-207ENST00000508583 RBFOX1Q9NWB1 397 aaKnown RBP7.59□□□□□ -1.19
NUP54-207ENST00000508583 RPUSD1Q9UJJ7 312 aaKnown RBP7.59□□□□□ -1.19
NUP54-207ENST00000508583 GSTK1Q9Y2Q3 226 aa7.59□□□□□ -1.19
NUP54-207ENST00000508583 TRDV1A0A1B0GX56 115 aa7.58□□□□□ -1.2
NUP54-207ENST00000508583 A0A1W2PQ09 198 aa7.58□□□□□ -1.2
NUP54-207ENST00000508583 K7N7A8 449 aa7.58□□□□□ -1.2
NUP54-207ENST00000508583 PDCD5O14737 125 aa7.58□□□□□ -1.2
NUP54-207ENST00000508583 INMTO95050 263 aa7.58□□□□□ -1.2
NUP54-207ENST00000508583 TK1P04183 234 aa7.58□□□□□ -1.2
NUP54-207ENST00000508583 ZNF44P15621 663 aa7.58□□□□□ -1.2
NUP54-207ENST00000508583 GABRR1P24046 479 aa7.58□□□□□ -1.2
NUP54-207ENST00000508583 CALRP27797 417 aaKnown RBP7.58□□□□□ -1.2
NUP54-207ENST00000508583 OR3A4PP47883 348 aa7.58□□□□□ -1.2
NUP54-207ENST00000508583 NPBWR2P48146 333 aa7.58□□□□□ -1.2
NUP54-207ENST00000508583 BPIFB3P59826 476 aa7.58□□□□□ -1.2
NUP54-207ENST00000508583 RPS25P62851 125 aaKnown RBP7.58□□□□□ -1.2
NUP54-207ENST00000508583 RPL31P62899 125 aaKnown RBP7.58□□□□□ -1.2
NUP54-207ENST00000508583 HOXA4Q00056 320 aaPredicted RBP7.58□□□□□ -1.2
NUP54-207ENST00000508583 COL10A1Q03692 680 aa7.58□□□□□ -1.2
NUP54-207ENST00000508583 PAX8Q06710 450 aa7.58□□□□□ -1.2
NUP54-207ENST00000508583 DGUOKQ16854 277 aa7.58□□□□□ -1.2
NUP54-207ENST00000508583 NHLRC3Q5JS37 347 aa7.58□□□□□ -1.2
NUP54-207ENST00000508583 ASPHD2Q6ICH7 369 aa7.58□□□□□ -1.2
NUP54-207ENST00000508583 CD200R1LQ6Q8B3 271 aa7.58□□□□□ -1.2
NUP54-207ENST00000508583 ASCL4Q6XD76 172 aa7.58□□□□□ -1.2
NUP54-207ENST00000508583 GDPD3Q7L5L3 318 aa7.58□□□□□ -1.2
NUP54-207ENST00000508583 OR8H2Q8N162 312 aa7.58□□□□□ -1.2
NUP54-207ENST00000508583 ZNRF1Q8ND25 227 aa7.58□□□□□ -1.2
NUP54-207ENST00000508583 C8orf46Q8TAG6 207 aa7.58□□□□□ -1.2
NUP54-207ENST00000508583 POM121Q96HA1 1249 aa7.58□□□□□ -1.2
NUP54-207ENST00000508583 SNX22Q96L94 193 aa7.58□□□□□ -1.2
NUP54-207ENST00000508583 DCTN5Q9BTE1 182 aa7.58□□□□□ -1.2
NUP54-207ENST00000508583 ZNF696Q9H7X3 374 aa7.58□□□□□ -1.2
NUP54-207ENST00000508583 CNTD2Q9H8S5 307 aa7.58□□□□□ -1.2
NUP54-207ENST00000508583 SPACA1Q9HBV2 294 aa7.58□□□□□ -1.2
NUP54-207ENST00000508583 STUB1Q9UNE7 303 aa7.58□□□□□ -1.2
NUP54-207ENST00000508583 SSR3Q9UNL2 185 aa7.58□□□□□ -1.2
NUP54-207ENST00000508583 ING4Q9UNL4 249 aa7.58□□□□□ -1.2
NUP54-207ENST00000508583 MRPS28Q9Y2Q9 187 aaKnown RBP7.58□□□□□ -1.2
NUP54-207ENST00000508583 KPTNQ9Y664 436 aa7.58□□□□□ -1.2
NUP54-207ENST00000508583 TRAV1-2A0A0B4J238 106 aa7.57□□□□□ -1.2
NUP54-207ENST00000508583 IGKV1-12A0A0C4DH73 117 aa7.57□□□□□ -1.2
NUP54-207ENST00000508583 C22orf46C9J442 243 aa7.57□□□□□ -1.2
NUP54-207ENST00000508583 M0R1W7 72 aa7.57□□□□□ -1.2
NUP54-207ENST00000508583 MGST3O14880 152 aa7.57□□□□□ -1.2
NUP54-207ENST00000508583 DEGS1O15121 323 aa7.57□□□□□ -1.2
NUP54-207ENST00000508583 PIN1P1O15428 100 aa7.57□□□□□ -1.2
NUP54-207ENST00000508583 HTR3BO95264 441 aa7.57□□□□□ -1.2
NUP54-207ENST00000508583 IGKV1D-12P01611 117 aa7.57□□□□□ -1.2
NUP54-207ENST00000508583 SFTPBP07988 381 aa7.57□□□□□ -1.2
NUP54-207ENST00000508583 SERPINA2P20848 420 aa7.57□□□□□ -1.2
NUP54-207ENST00000508583 KCNJ3P48549 501 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms