RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 IHHQ14623 411 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 SNRNP35Q16560 246 aaKnown RBP3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 NRF1Q16656 503 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 SMIM21Q3B7S5 101 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 ACOT6Q3I5F7 207 aaPredicted RBP3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 C14orf28Q4W4Y0 310 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 KLHL12Q53G59 568 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 TTC32Q5I0X7 151 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 WDR38Q5JTN6 314 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 CLEC12AQ5QGZ9 265 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 ELP2Q6IA86 826 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 LAMTOR1Q6IAA8 161 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 HIST2H3AQ71DI3 136 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 SLC16A13Q7RTY0 426 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 NEGR1Q7Z3B1 354 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 GRINAQ7Z429 371 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 CALHM3Q86XJ0 350 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 ZBTB8OSQ8IWT0 167 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 CADM2Q8N3J6 435 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 COX18Q8N8Q8 333 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 CHST4Q8NCG5 386 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 OR10G7Q8NGN6 311 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 OR2A12Q8NGT7 310 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 ZFP90Q8TF47 636 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 SECTM1Q8WVN6 248 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 EXOSC8Q96B26 276 aaKnown RBP3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 RNF185Q96GF1 192 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 C18orf12Q96KH6 178 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 RDH12Q96NR8 316 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 PLEKHF1Q96S99 279 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 MARVELD1Q9BSK0 173 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 MS4A8Q9BY19 250 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 PITPNM3Q9BZ71 974 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 SLIRPQ9GZT3 109 aaKnown RBP3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 OR51E2Q9H255 320 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 ZSCAN16Q9H4T2 348 aaPredicted RBP3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 LRTM1Q9HBL6 345 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 DNAJC27Q9NZQ0 273 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 MTFP1Q9UDX5 166 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 ZNF223Q9UK11 482 aaPredicted RBP3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 RARRES3Q9UL19 164 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 NEU3Q9UQ49 428 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 VSIG4Q9Y279 399 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 KCNE3Q9Y6H6 103 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 SETD5Q9C0A6 1442 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 BRCA1P38398 1863 aaKnown RBP3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 PRDM2Q13029 1718 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 IGHV4OR15-8A0A075B7B6 117 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 A0A087WWV3 80 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 SAA2-SAA4A0A096LPE2 208 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 A0A1B0GXF2 115 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 K7EP13 123 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 SLC17A2O00624 439 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 EDIL3O43854 480 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 PDE6DO43924 150 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 SPAG7O75391 227 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 CRLF1O75462 422 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 GCM2O75603 506 aaPredicted RBP3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 REM1O75628 298 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 TRMUO75648 421 aaKnown RBP3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 UPK1BO75841 260 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 C6orf47O95873 294 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 PRSS2P07478 247 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 IL3P08700 152 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 SNRPCP09234 159 aaKnown RBP3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 MIPP30301 263 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 AKR1C3P42330 323 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 CDKN2BP42772 138 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 MEOX2P50222 304 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 NDUFA8P51970 172 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 SLC35A2P78381 396 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 EMX1Q04741 257 aaPredicted RBP3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 CD47Q08722 323 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 ZNF763Q0D2J5 394 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 ZNF630Q2M218 657 aaPredicted RBP3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 CDNFQ49AH0 187 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 TMEM128Q5BJH2 165 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 TMEM255AQ5JRV8 349 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 PAGE3Q5JUK9 113 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 ZNF684Q5T5D7 378 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 TMEM78Q5T7P6 136 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 SPATA31B1PQ5VZV4 182 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 STEAP4Q687X5 459 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 C11orf71Q6IPW1 123 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 C3orf62Q6ZUJ4 267 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 C17orf82Q86X59 251 aaPredicted RBP3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 C11orf72Q8NBR9 251 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 ZNF485Q8NCK3 441 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 OR4P4Q8NGL7 312 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 CYGBQ8WWM9 190 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 DIRAS2Q96HU8 199 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 PYURFQ96I23 114 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 ANKRD36BP1Q96IX9 119 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 BTN2A3PQ96KV6 586 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 RIOK2Q9BVS4 552 aaKnown RBP3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 SELENOIQ9C0D9 397 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 CHST5Q9GZS9 411 aa3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 ISG20L2Q9H9L3 353 aaKnown RBP3.34□□□□□ -1.87
SMARCA5-202ENST00000508573 ZNF556Q9HAH1 456 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms