RNA–Protein interactions for RNA: ENST00000508343.1

TRIO-211, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-211ENST00000508343 MAGEB3O15480 346 aa12.36□□□□□ -0.43
TRIO-211ENST00000508343 ZNF737O75373 536 aa12.36□□□□□ -0.43
TRIO-211ENST00000508343 KDM4BO94953 1096 aa12.36□□□□□ -0.43
TRIO-211ENST00000508343 HAND1O96004 215 aa12.36□□□□□ -0.43
TRIO-211ENST00000508343 IGKV1D-12P01611 117 aa12.36□□□□□ -0.43
TRIO-211ENST00000508343 PRKACAP17612 351 aa12.36□□□□□ -0.43
TRIO-211ENST00000508343 TAS2R43P59537 309 aa12.36□□□□□ -0.43
TRIO-211ENST00000508343 GUCA2AQ02747 115 aa12.36□□□□□ -0.43
TRIO-211ENST00000508343 SPIN3Q5JUX0 258 aa12.36□□□□□ -0.43
TRIO-211ENST00000508343 TMEM200BQ69YZ2 307 aa12.36□□□□□ -0.43
TRIO-211ENST00000508343 CRIP3Q6Q6R5 217 aa12.36□□□□□ -0.43
TRIO-211ENST00000508343 NANOGP1Q8N7R0 232 aa12.36□□□□□ -0.43
TRIO-211ENST00000508343 OR4M1Q8NGD0 313 aa12.36□□□□□ -0.43
TRIO-211ENST00000508343 OR5D18Q8NGL1 313 aa12.36□□□□□ -0.43
TRIO-211ENST00000508343 OR5D13Q8NGL4 314 aa12.36□□□□□ -0.43
TRIO-211ENST00000508343 TMEM106AQ96A25 262 aa12.36□□□□□ -0.43
TRIO-211ENST00000508343 CPNE2Q96FN4 548 aaPredicted RBP12.36□□□□□ -0.43
TRIO-211ENST00000508343 C1orf147Q96MC9 270 aaPredicted RBP12.36□□□□□ -0.43
TRIO-211ENST00000508343 HMG20AQ9NP66 347 aa12.36□□□□□ -0.43
TRIO-211ENST00000508343 SCN3BQ9NY72 215 aa12.36□□□□□ -0.43
TRIO-211ENST00000508343 GLS2Q9UI32 602 aa12.36□□□□□ -0.43
TRIO-211ENST00000508343 ERGIC3Q9Y282 383 aa12.36□□□□□ -0.43
TRIO-211ENST00000508343 MDFIC2A0A1B0GVS7 189 aa12.35□□□□□ -0.43
TRIO-211ENST00000508343 TMEM82A0PJX8 343 aa12.35□□□□□ -0.43
TRIO-211ENST00000508343 PTGES3LE9PB15 166 aa12.35□□□□□ -0.43
TRIO-211ENST00000508343 RNASEK-C17orf49H0YIS7 233 aa12.35□□□□□ -0.43
TRIO-211ENST00000508343 MYL12BO14950 172 aa12.35□□□□□ -0.43
TRIO-211ENST00000508343 CDK1P06493 297 aa12.35□□□□□ -0.43
TRIO-211ENST00000508343 TMEM225BP0DP42 221 aa12.35□□□□□ -0.43
TRIO-211ENST00000508343 CALCBP10092 127 aa12.35□□□□□ -0.43
TRIO-211ENST00000508343 MYF6P23409 242 aa12.35□□□□□ -0.43
TRIO-211ENST00000508343 DUSP1P28562 367 aa12.35□□□□□ -0.43
TRIO-211ENST00000508343 WNT4P56705 351 aa12.35□□□□□ -0.43
TRIO-211ENST00000508343 ZP1P60852 638 aa12.35□□□□□ -0.43
TRIO-211ENST00000508343 ACTG1P63261 375 aa12.35□□□□□ -0.43
TRIO-211ENST00000508343 SLC9A3R2Q15599 337 aa12.35□□□□□ -0.43
TRIO-211ENST00000508343 YIF1BQ5BJH7 314 aa12.35□□□□□ -0.43
TRIO-211ENST00000508343 RNLSQ5VYX0 342 aa12.35□□□□□ -0.43
TRIO-211ENST00000508343 NCR3LG1Q68D85 454 aa12.35□□□□□ -0.43
TRIO-211ENST00000508343 ASPHD2Q6ICH7 369 aa12.35□□□□□ -0.43
TRIO-211ENST00000508343 Q6YL49 198 aa12.35□□□□□ -0.43
TRIO-211ENST00000508343 ZFP41Q8N8Y5 198 aa12.35□□□□□ -0.43
TRIO-211ENST00000508343 TNFRSF14Q92956 283 aa12.35□□□□□ -0.43
TRIO-211ENST00000508343 MYDGFQ969H8 173 aa12.35□□□□□ -0.43
TRIO-211ENST00000508343 SLC25A28Q96A46 364 aa12.35□□□□□ -0.43
TRIO-211ENST00000508343 DUX5Q96PT3 197 aa12.35□□□□□ -0.43
TRIO-211ENST00000508343 TAS2R4Q9NYW5 299 aa12.35□□□□□ -0.43
TRIO-211ENST00000508343 IL36RNQ9UBH0 155 aa12.35□□□□□ -0.43
TRIO-211ENST00000508343 GSTK1Q9Y2Q3 226 aa12.35□□□□□ -0.43
TRIO-211ENST00000508343 ANK2Q01484 3957 aa12.35□□□□□ -0.43
TRIO-211ENST00000508343 TRBV5-5A0A0J9YX44 114 aa12.34□□□□□ -0.43
TRIO-211ENST00000508343 TMEM89A2RUT3 159 aa12.34□□□□□ -0.43
TRIO-211ENST00000508343 SH2D1BO14796 132 aa12.34□□□□□ -0.43
TRIO-211ENST00000508343 ALDOBP05062 364 aa12.34□□□□□ -0.43
TRIO-211ENST00000508343 RNASE1P07998 156 aaKnown RBP12.34□□□□□ -0.43
TRIO-211ENST00000508343 EEF1B2P24534 225 aaKnown RBP12.34□□□□□ -0.43
TRIO-211ENST00000508343 UBE2E1P51965 193 aa12.34□□□□□ -0.43
TRIO-211ENST00000508343 DLX1P56177 255 aa12.34□□□□□ -0.43
TRIO-211ENST00000508343 RPS11P62280 158 aaKnown RBP eCLIP12.34□□□□□ -0.43
TRIO-211ENST00000508343 PRB3Q04118 309 aaPredicted RBP12.34□□□□□ -0.43
TRIO-211ENST00000508343 Q499Y3 187 aa12.34□□□□□ -0.43
TRIO-211ENST00000508343 C17orf107Q6ZR85 190 aa12.34□□□□□ -0.43
TRIO-211ENST00000508343 GDPD3Q7L5L3 318 aa12.34□□□□□ -0.43
TRIO-211ENST00000508343 SATL1Q86VE3 508 aa12.34□□□□□ -0.43
TRIO-211ENST00000508343 OR8H2Q8N162 312 aa12.34□□□□□ -0.43
TRIO-211ENST00000508343 PIP4P2Q8N4L2 257 aa12.34□□□□□ -0.43
TRIO-211ENST00000508343 OR52N4Q8NGI2 321 aa12.34□□□□□ -0.43
TRIO-211ENST00000508343 OR51A2Q8NGJ7 313 aa12.34□□□□□ -0.43
TRIO-211ENST00000508343 OR13C5Q8NGS8 318 aa12.34□□□□□ -0.43
TRIO-211ENST00000508343 GCDHQ92947 438 aaPredicted RBP12.34□□□□□ -0.43
TRIO-211ENST00000508343 PGLYRP3Q96LB9 341 aa12.34□□□□□ -0.43
TRIO-211ENST00000508343 GPER1Q99527 375 aa12.34□□□□□ -0.43
TRIO-211ENST00000508343 ANKRD60Q9BZ19 345 aa12.34□□□□□ -0.43
TRIO-211ENST00000508343 PCDHGB5Q9Y5G0 923 aa12.34□□□□□ -0.43
TRIO-211ENST00000508343 A0A0U1RQK1 487 aa12.33□□□□□ -0.44
TRIO-211ENST00000508343 hCG_1809904A0A1W2PP81 198 aa12.33□□□□□ -0.44
TRIO-211ENST00000508343 A0A1W2PPE2 198 aa12.33□□□□□ -0.44
TRIO-211ENST00000508343 A0A1W2PR64 198 aa12.33□□□□□ -0.44
TRIO-211ENST00000508343 A0A1W2PRV1 198 aa12.33□□□□□ -0.44
TRIO-211ENST00000508343 HOXA3O43365 443 aaPredicted RBP12.33□□□□□ -0.44
TRIO-211ENST00000508343 CD1AP06126 327 aa12.33□□□□□ -0.44
TRIO-211ENST00000508343 GABRR1P24046 479 aa12.33□□□□□ -0.44
TRIO-211ENST00000508343 HSPA13P48723 471 aa12.33□□□□□ -0.44
TRIO-211ENST00000508343 SNU13P55769 128 aaKnown RBP12.33□□□□□ -0.44
TRIO-211ENST00000508343 EDDM3BP56851 147 aa12.33□□□□□ -0.44
TRIO-211ENST00000508343 PPP3R1P63098 170 aa12.33□□□□□ -0.44
TRIO-211ENST00000508343 RIPK1Q13546 671 aa12.33□□□□□ -0.44
TRIO-211ENST00000508343 C11orf42Q8N5U0 333 aa12.33□□□□□ -0.44
TRIO-211ENST00000508343 PXT1Q8NFP0 134 aa12.33□□□□□ -0.44
TRIO-211ENST00000508343 PPP1R35Q8TAP8 253 aa12.33□□□□□ -0.44
TRIO-211ENST00000508343 CDCA4Q9BXL8 241 aa12.33□□□□□ -0.44
TRIO-211ENST00000508343 EXOSC4Q9NPD3 245 aaKnown RBP12.33□□□□□ -0.44
TRIO-211ENST00000508343 TMEM138Q9NPI0 162 aa12.33□□□□□ -0.44
TRIO-211ENST00000508343 SF3B6Q9Y3B4 125 aaKnown RBP12.33□□□□□ -0.44
TRIO-211ENST00000508343 TPRKBQ9Y3C4 175 aa12.33□□□□□ -0.44
TRIO-211ENST00000508343 FAM96BQ9Y3D0 163 aa12.33□□□□□ -0.44
TRIO-211ENST00000508343 PNMA8CA0A1B0GUJ8 204 aa12.32□□□□□ -0.44
TRIO-211ENST00000508343 GABRPO00591 440 aa12.32□□□□□ -0.44
TRIO-211ENST00000508343 NPFFO15130 113 aa12.32□□□□□ -0.44
TRIO-211ENST00000508343 PSPNO60542 156 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms