RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 OR4C3Q8NH37 302 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 ZPLD1Q8TCW7 415 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 ARL11Q969Q4 196 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 C12orf43Q96C57 262 aaKnown RBP2.6□□□□□ -1.99
NEDD4-208ENST00000508342 TLCD1Q96CP7 247 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 WDYHV1Q96HA8 205 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 SEC22AQ96IW7 307 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 ALKBH3Q96Q83 286 aaPredicted RBP2.6□□□□□ -1.99
NEDD4-208ENST00000508342 FEVQ99581 238 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 SSBP3Q9BWW4 388 aaPredicted RBP2.6□□□□□ -1.99
NEDD4-208ENST00000508342 OR52D1Q9H346 318 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 PATZ1Q9HBE1 687 aaKnown RBP2.6□□□□□ -1.99
NEDD4-208ENST00000508342 MRPS28Q9Y2Q9 187 aaKnown RBP2.6□□□□□ -1.99
NEDD4-208ENST00000508342 AK6Q9Y3D8 172 aaKnown RBP2.6□□□□□ -1.99
NEDD4-208ENST00000508342 PIKFYVEQ9Y2I7 2098 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 IGLV3-16A0A075B6K0 115 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 METTL15A6NJ78 407 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 TMEM212A6NML5 194 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 M0R082 166 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 P2RY10O00398 339 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 RP2O75695 350 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 IGHG4P01861 327 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 HOXB5P09067 269 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 NFYAP23511 347 aaPredicted RBP2.6□□□□□ -1.99
NEDD4-208ENST00000508342 MST1P26927 711 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 CDAP32320 146 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 KIR2DL2P43627 348 aaPredicted RBP2.6□□□□□ -1.99
NEDD4-208ENST00000508342 ZNF117Q03924 483 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 RELAQ04206 551 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 ZNF672Q499Z4 452 aaPredicted RBP2.6□□□□□ -1.99
NEDD4-208ENST00000508342 OR10K2Q6IF99 312 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 SYT9Q86SS6 491 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 UBE2DNLQ8IWF7 75 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 SHISA5Q8N114 240 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 BATF2Q8N1L9 274 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 OR56B4Q8NH76 319 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 PFN4Q8NHR9 129 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 CMBLQ96DG6 245 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 ALG12Q9BV10 488 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 PPA2Q9H2U2 334 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 TOR3AQ9H497 397 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 C1orf123Q9NWV4 160 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 MIOXQ9UGB7 285 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 ST6GALNAC2Q9UJ37 374 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 NAGKQ9UJ70 344 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 NCOR2Q9Y618 2525 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 CPAMD8Q8IZJ3 1885 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 LOC105371242A0A075B767 164 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 A0A1W2PS29 197 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 HRASP01112 189 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 CALCBP10092 127 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 HLA-DOBP13765 273 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 MYF6P23409 242 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 EPHA2P29317 976 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 SMAGPQ0VAQ4 97 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 DUSP7Q16829 419 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 C22orf42Q6IC83 251 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 H3F3CQ6NXT2 135 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 ACSM6Q6P461 480 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 GDPGP1Q6ZNW5 385 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 ZFP41Q8N8Y5 198 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 KCTD12Q96CX2 325 aaKnown RBP2.59□□□□□ -1.99
NEDD4-208ENST00000508342 SNX22Q96L94 193 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 HYLS1Q96M11 299 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 ELOVL1Q9BW60 279 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 SAMD10Q9BYL1 202 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 STRAPQ9Y3F4 350 aaKnown RBP2.59□□□□□ -1.99
NEDD4-208ENST00000508342 V9GY05 133 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 IGHV3OR16-12A0A075B7B8 117 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 SERTM2A0A1B0GWG4 89 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 TCRBV5S1A1TA0A578 114 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 C20orf202A1L168 122 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 GAGE10A6NGK3 116 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 UPK1AO00322 258 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 IMPA2O14732 288 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 HPRP00739 348 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 FUCA1P04066 466 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 CRHP06850 196 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 SLC25A16P16260 332 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 MRPS34P82930 218 aaKnown RBP2.59□□□□□ -1.99
NEDD4-208ENST00000508342 ZNF74Q16587 644 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 IZUMO4Q1ZYL8 232 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 ZNF791Q3KP31 576 aaPredicted RBP2.59□□□□□ -1.99
NEDD4-208ENST00000508342 ACTBL2Q562R1 376 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 NUFIP2Q7Z417 695 aaKnown RBP2.59□□□□□ -1.99
NEDD4-208ENST00000508342 ZNF546Q86UE3 836 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 MDP1Q86V88 176 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 C1orf174Q8IYL3 243 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 SLC38A6Q8IZM9 456 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 LYG1Q8N1E2 194 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 SLC22A24Q8N4F4 322 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 OR51H1Q8NH63 302 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 RCC1LQ96I51 464 aaKnown RBP2.59□□□□□ -1.99
NEDD4-208ENST00000508342 TMEM147Q9BVK8 224 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 ALX4Q9H161 411 aaPredicted RBP2.59□□□□□ -1.99
NEDD4-208ENST00000508342 SLC38A1Q9H2H9 487 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 TUBB1Q9H4B7 451 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 ZNF703Q9H7S9 590 aaPredicted RBP2.59□□□□□ -1.99
NEDD4-208ENST00000508342 CNTD2Q9H8S5 307 aa2.59□□□□□ -1.99
NEDD4-208ENST00000508342 WDR76Q9H967 626 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms