RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 UQCC3Q6UW78 93 aa12.52□□□□□ -0.4
DDX41-208ENST00000507955 PEG10Q86TG7 708 aaKnown RBP12.52□□□□□ -0.4
DDX41-208ENST00000507955 IQCF2Q8IXL9 164 aa12.52□□□□□ -0.4
DDX41-208ENST00000507955 BAP18Q8IXM2 172 aa12.52□□□□□ -0.4
DDX41-208ENST00000507955 SPSB1Q96BD6 273 aa12.52□□□□□ -0.4
DDX41-208ENST00000507955 FGF23Q9GZV9 251 aaPredicted RBP12.52□□□□□ -0.4
DDX41-208ENST00000507955 IL36RNQ9UBH0 155 aa12.52□□□□□ -0.4
DDX41-208ENST00000507955 CEACAM18A8MTB9 384 aa12.52□□□□□ -0.41
DDX41-208ENST00000507955 TPT1P13693 172 aaKnown RBP12.52□□□□□ -0.41
DDX41-208ENST00000507955 PMP22Q01453 160 aa12.52□□□□□ -0.41
DDX41-208ENST00000507955 PDZK1IP1Q13113 114 aa12.52□□□□□ -0.41
DDX41-208ENST00000507955 CNN3Q15417 329 aaKnown RBP12.52□□□□□ -0.41
DDX41-208ENST00000507955 SP6Q3SY56 376 aa12.52□□□□□ -0.41
DDX41-208ENST00000507955 SLC25A26Q70HW3 274 aa12.52□□□□□ -0.41
DDX41-208ENST00000507955 CBLN2Q8IUK8 224 aa12.52□□□□□ -0.41
DDX41-208ENST00000507955 OR56B2PQ8NGI1 322 aa12.52□□□□□ -0.41
DDX41-208ENST00000507955 C10orf35Q96D05 121 aa12.52□□□□□ -0.41
DDX41-208ENST00000507955 CMSS1Q9BQ75 279 aaKnown RBP12.52□□□□□ -0.41
DDX41-208ENST00000507955 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.52□□□□□ -0.41
DDX41-208ENST00000507955 B4GALT7Q9UBV7 327 aa12.52□□□□□ -0.41
DDX41-208ENST00000507955 PRSS50Q9UI38 385 aa12.52□□□□□ -0.41
DDX41-208ENST00000507955 SVILO95425 2214 aa12.52□□□□□ -0.41
DDX41-208ENST00000507955 SMG1Q96Q15 3661 aaKnown RBP12.51□□□□□ -0.41
DDX41-208ENST00000507955 C21orf140B9A014 251 aa12.51□□□□□ -0.41
DDX41-208ENST00000507955 CBX5P45973 191 aa12.51□□□□□ -0.41
DDX41-208ENST00000507955 TAS2R31P59538 309 aa12.51□□□□□ -0.41
DDX41-208ENST00000507955 TAS2R46P59540 309 aa12.51□□□□□ -0.41
DDX41-208ENST00000507955 FXYD4P59646 89 aa12.51□□□□□ -0.41
DDX41-208ENST00000507955 PCBD1P61457 104 aa12.51□□□□□ -0.41
DDX41-208ENST00000507955 DAZAP2Q15038 168 aaPredicted RBP12.51□□□□□ -0.41
DDX41-208ENST00000507955 TMEM42Q69YG0 159 aa12.51□□□□□ -0.41
DDX41-208ENST00000507955 PAPOLGQ9BWT3 736 aaKnown RBP12.51□□□□□ -0.41
DDX41-208ENST00000507955 TLNRD1Q9H1K6 362 aa12.51□□□□□ -0.41
DDX41-208ENST00000507955 ANXA10Q9UJ72 324 aa12.51□□□□□ -0.41
DDX41-208ENST00000507955 HSPB6O14558 160 aa12.51□□□□□ -0.41
DDX41-208ENST00000507955 LILRA1O75019 489 aa12.51□□□□□ -0.41
DDX41-208ENST00000507955 ZNF528Q3MIS6 628 aa12.51□□□□□ -0.41
DDX41-208ENST00000507955 HIKESHIQ53FT3 197 aa12.51□□□□□ -0.41
DDX41-208ENST00000507955 ACTBL2Q562R1 376 aa12.51□□□□□ -0.41
DDX41-208ENST00000507955 ZNF611Q8N823 705 aa12.51□□□□□ -0.41
DDX41-208ENST00000507955 SYNGR4O95473 234 aa12.5□□□□□ -0.41
DDX41-208ENST00000507955 SP1P08047 785 aa12.5□□□□□ -0.41
DDX41-208ENST00000507955 OR5H8P0DN80 308 aa12.5□□□□□ -0.41
DDX41-208ENST00000507955 CHATP28329 748 aa12.5□□□□□ -0.41
DDX41-208ENST00000507955 DUSP1P28562 367 aa12.5□□□□□ -0.41
DDX41-208ENST00000507955 GPM6AP51674 278 aa12.5□□□□□ -0.41
DDX41-208ENST00000507955 AIMP2Q13155 320 aaKnown RBP12.5□□□□□ -0.41
DDX41-208ENST00000507955 FAM189A2Q15884 450 aa12.5□□□□□ -0.41
DDX41-208ENST00000507955 CCDC36Q8IYA8 594 aa12.5□□□□□ -0.41
DDX41-208ENST00000507955 OSR2Q8N2R0 312 aa12.5□□□□□ -0.41
DDX41-208ENST00000507955 OR10Z1Q8NGY1 313 aa12.5□□□□□ -0.41
DDX41-208ENST00000507955 RIF1Q5UIP0 2472 aaKnown RBP12.5□□□□□ -0.41
DDX41-208ENST00000507955 IGKV3D-15A0A087WSY6 115 aa12.5□□□□□ -0.41
DDX41-208ENST00000507955 A0A1W2PR80 420 aa12.5□□□□□ -0.41
DDX41-208ENST00000507955 OR7C1O76099 320 aaPredicted RBP12.5□□□□□ -0.41
DDX41-208ENST00000507955 FCGR3AP08637 254 aa12.5□□□□□ -0.41
DDX41-208ENST00000507955 H2AFB1P0C5Y9 115 aa12.5□□□□□ -0.41
DDX41-208ENST00000507955 NOVA1P51513 510 aaKnown RBP12.5□□□□□ -0.41
DDX41-208ENST00000507955 RAB1AP62820 205 aa12.5□□□□□ -0.41
DDX41-208ENST00000507955 RAB32Q13637 225 aa12.5□□□□□ -0.41
DDX41-208ENST00000507955 OR8B8Q15620 311 aa12.5□□□□□ -0.41
DDX41-208ENST00000507955 HFEQ30201 348 aa12.5□□□□□ -0.41
DDX41-208ENST00000507955 LHFPL2Q6ZUX7 228 aa12.5□□□□□ -0.41
DDX41-208ENST00000507955 C1QTNF5Q9BXJ0 243 aa12.5□□□□□ -0.41
DDX41-208ENST00000507955 STARD10Q9Y365 291 aa12.5□□□□□ -0.41
DDX41-208ENST00000507955 LYL1P12980 280 aa12.49□□□□□ -0.41
DDX41-208ENST00000507955 NAAAQ02083 359 aa12.49□□□□□ -0.41
DDX41-208ENST00000507955 ZNF585AQ6P3V2 769 aa12.49□□□□□ -0.41
DDX41-208ENST00000507955 PRSS54Q6PEW0 395 aa12.49□□□□□ -0.41
DDX41-208ENST00000507955 SLAMF9Q96A28 289 aa12.49□□□□□ -0.41
DDX41-208ENST00000507955 TMEM45BQ96B21 275 aa12.49□□□□□ -0.41
DDX41-208ENST00000507955 SAV1Q9H4B6 383 aaPredicted RBP12.49□□□□□ -0.41
DDX41-208ENST00000507955 RAB18Q9NP72 206 aa12.49□□□□□ -0.41
DDX41-208ENST00000507955 TMEM9BQ9NQ34 198 aa12.49□□□□□ -0.41
DDX41-208ENST00000507955 OR2S2Q9NQN1 319 aa12.49□□□□□ -0.41
DDX41-208ENST00000507955 ABI3Q9P2A4 366 aa12.49□□□□□ -0.41
DDX41-208ENST00000507955 SLC7A11Q9UPY5 501 aa12.49□□□□□ -0.41
DDX41-208ENST00000507955 FAM96BQ9Y3D0 163 aa12.49□□□□□ -0.41
DDX41-208ENST00000507955 ZNF816-ZNF321PA0A0X1KG74 233 aa12.49□□□□□ -0.41
DDX41-208ENST00000507955 HAAOP46952 286 aa12.49□□□□□ -0.41
DDX41-208ENST00000507955 S100A10P60903 97 aa12.49□□□□□ -0.41
DDX41-208ENST00000507955 C10orf91Q5T1B1 145 aa12.49□□□□□ -0.41
DDX41-208ENST00000507955 SLC22A25Q6T423 547 aa12.49□□□□□ -0.41
DDX41-208ENST00000507955 POC1AQ8NBT0 407 aa12.49□□□□□ -0.41
DDX41-208ENST00000507955 RNF141Q8WVD5 230 aa12.49□□□□□ -0.41
DDX41-208ENST00000507955 APH1AQ96BI3 265 aa12.49□□□□□ -0.41
DDX41-208ENST00000507955 AKAP13Q12802 2813 aa12.49□□□□□ -0.41
DDX41-208ENST00000507955 MAP1BP46821 2468 aaKnown RBP12.49□□□□□ -0.41
DDX41-208ENST00000507955 ZFHX2Q9C0A1 2572 aaPredicted RBP12.48□□□□□ -0.41
DDX41-208ENST00000507955 IGHV3-64DA0A0J9YX35 117 aa12.48□□□□□ -0.41
DDX41-208ENST00000507955 F8W036 122 aa12.48□□□□□ -0.41
DDX41-208ENST00000507955 NPBWR1P48145 328 aa12.48□□□□□ -0.41
DDX41-208ENST00000507955 FUT6P51993 359 aa12.48□□□□□ -0.41
DDX41-208ENST00000507955 BLOC1S1P78537 153 aa12.48□□□□□ -0.41
DDX41-208ENST00000507955 CYCSP99999 105 aaKnown RBP12.48□□□□□ -0.41
DDX41-208ENST00000507955 IL15RAQ13261 267 aa12.48□□□□□ -0.41
DDX41-208ENST00000507955 TRIP6Q15654 476 aaKnown RBP12.48□□□□□ -0.41
DDX41-208ENST00000507955 PHLDA2Q53GA4 152 aa12.48□□□□□ -0.41
DDX41-208ENST00000507955 SPATA46Q5T0L3 261 aa12.48□□□□□ -0.41
DDX41-208ENST00000507955 ZNF100Q8IYN0 542 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms