RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 PKDREJQ9NTG1 2253 aa14.69□□□□□ -0.06
RNF4-209ENST00000507784 TANC2Q9HCD6 1990 aa14.69□□□□□ -0.06
RNF4-209ENST00000507784 LYNX1G3V0Z9 82 aa14.69□□□□□ -0.06
RNF4-209ENST00000507784 SH2D1BO14796 132 aa14.69□□□□□ -0.06
RNF4-209ENST00000507784 LHBP01229 141 aa14.69□□□□□ -0.06
RNF4-209ENST00000507784 HLA-DQB1P01920 261 aa14.69□□□□□ -0.06
RNF4-209ENST00000507784 LYNX1P0DP58 116 aa14.69□□□□□ -0.06
RNF4-209ENST00000507784 ZNF44P15621 663 aa14.69□□□□□ -0.06
RNF4-209ENST00000507784 GNB3P16520 340 aa14.69□□□□□ -0.06
RNF4-209ENST00000507784 PTH2RP49190 550 aa14.69□□□□□ -0.06
RNF4-209ENST00000507784 PPP5CP53041 499 aa14.69□□□□□ -0.06
RNF4-209ENST00000507784 TMEM50BP56557 158 aa14.69□□□□□ -0.06
RNF4-209ENST00000507784 ZNF79Q15937 498 aa14.69□□□□□ -0.06
RNF4-209ENST00000507784 MPV17LQ2QL34 196 aa14.69□□□□□ -0.06
RNF4-209ENST00000507784 HFEQ30201 348 aa14.69□□□□□ -0.06
RNF4-209ENST00000507784 NHLRC3Q5JS37 347 aa14.69□□□□□ -0.06
RNF4-209ENST00000507784 BRICD5Q6PL45 260 aa14.69□□□□□ -0.06
RNF4-209ENST00000507784 LINC00596Q86U02 117 aa14.69□□□□□ -0.06
RNF4-209ENST00000507784 RTN4RL2Q86UN3 420 aa14.69□□□□□ -0.06
RNF4-209ENST00000507784 DEFB108BQ8NET1 73 aa14.69□□□□□ -0.06
RNF4-209ENST00000507784 OR5T2Q8NGG2 359 aa14.69□□□□□ -0.06
RNF4-209ENST00000507784 C15orf40Q8WUR7 153 aa14.69□□□□□ -0.06
RNF4-209ENST00000507784 ABHD1Q96SE0 405 aa14.69□□□□□ -0.06
RNF4-209ENST00000507784 CCL19Q99731 98 aa14.69□□□□□ -0.06
RNF4-209ENST00000507784 SRRQ9GZT4 340 aa14.69□□□□□ -0.06
RNF4-209ENST00000507784 AUNIPQ9H7T9 357 aa14.69□□□□□ -0.06
RNF4-209ENST00000507784 PLEKHJ1Q9NW61 149 aa14.69□□□□□ -0.06
RNF4-209ENST00000507784 ZNF581Q9P0T4 197 aa14.69□□□□□ -0.06
RNF4-209ENST00000507784 NLKQ9UBE8 527 aa14.69□□□□□ -0.06
RNF4-209ENST00000507784 WIPI2Q9Y4P8 454 aa14.69□□□□□ -0.06
RNF4-209ENST00000507784 NPTNQ9Y639 398 aa14.69□□□□□ -0.06
RNF4-209ENST00000507784 FAM90A10PA6NDY2 464 aa14.68□□□□□ -0.06
RNF4-209ENST00000507784 FAM90A18PA6NE21 464 aa14.68□□□□□ -0.06
RNF4-209ENST00000507784 FAM90A16PA6NEW6 464 aa14.68□□□□□ -0.06
RNF4-209ENST00000507784 FAM90A20PA6NIJ5 464 aa14.68□□□□□ -0.06
RNF4-209ENST00000507784 FAM90A8PA6NJQ4 464 aa14.68□□□□□ -0.06
RNF4-209ENST00000507784 FAM90A7PA6NKC0 464 aa14.68□□□□□ -0.06
RNF4-209ENST00000507784 FAM90A22PA8MWA6 464 aa14.68□□□□□ -0.06
RNF4-209ENST00000507784 FAM90A12PA8MX19 464 aa14.68□□□□□ -0.06
RNF4-209ENST00000507784 FAM90A5PA8MXJ8 464 aa14.68□□□□□ -0.06
RNF4-209ENST00000507784 FAM90A23PA8MXZ1 464 aa14.68□□□□□ -0.06
RNF4-209ENST00000507784 H7C417 338 aa14.68□□□□□ -0.06
RNF4-209ENST00000507784 IFNL4K9M1U5 179 aa14.68□□□□□ -0.06
RNF4-209ENST00000507784 SIRPB1O00241 398 aa14.68□□□□□ -0.06
RNF4-209ENST00000507784 HAND1O96004 215 aa14.68□□□□□ -0.06
RNF4-209ENST00000507784 KNG1P01042 644 aa14.68□□□□□ -0.06
RNF4-209ENST00000507784 FAM90A15PP0C7V4 464 aa14.68□□□□□ -0.06
RNF4-209ENST00000507784 FAM90A13PP0C7W8 464 aa14.68□□□□□ -0.06
RNF4-209ENST00000507784 FAM90A14PP0C7W9 464 aa14.68□□□□□ -0.06
RNF4-209ENST00000507784 FAM90A24PP0C7X0 464 aa14.68□□□□□ -0.06
RNF4-209ENST00000507784 FUT3P21217 361 aa14.68□□□□□ -0.06
RNF4-209ENST00000507784 CD40LGP29965 261 aa14.68□□□□□ -0.06
RNF4-209ENST00000507784 GABRA2P47869 451 aa14.68□□□□□ -0.06
RNF4-209ENST00000507784 CEBPDP49716 269 aaPredicted RBP14.68□□□□□ -0.06
RNF4-209ENST00000507784 ZNF260Q3ZCT1 412 aa14.68□□□□□ -0.06
RNF4-209ENST00000507784 PLAC9Q5JTB6 97 aa14.68□□□□□ -0.06
RNF4-209ENST00000507784 C6orf201Q7Z4U5 140 aa14.68□□□□□ -0.06
RNF4-209ENST00000507784 NEK7Q8TDX7 302 aa14.68□□□□□ -0.06
RNF4-209ENST00000507784 RDH5Q92781 318 aa14.68□□□□□ -0.06
RNF4-209ENST00000507784 GCDHQ92947 438 aaPredicted RBP14.68□□□□□ -0.06
RNF4-209ENST00000507784 YIPF5Q969M3 257 aa14.68□□□□□ -0.06
RNF4-209ENST00000507784 C14orf79Q96F83 325 aa14.68□□□□□ -0.06
RNF4-209ENST00000507784 POM121Q96HA1 1249 aa14.68□□□□□ -0.06
RNF4-209ENST00000507784 NUDT16L1Q9BRJ7 211 aaKnown RBP14.68□□□□□ -0.06
RNF4-209ENST00000507784 PPIAL4EA0A075B759 164 aa14.67□□□□□ -0.06
RNF4-209ENST00000507784 UBE2QL1A1L167 161 aa14.67□□□□□ -0.06
RNF4-209ENST00000507784 TMEM235A6NFC5 223 aa14.67□□□□□ -0.06
RNF4-209ENST00000507784 RFPL4AA6NLU0 287 aa14.67□□□□□ -0.06
RNF4-209ENST00000507784 FOXI3A8MTJ6 420 aaPredicted RBP14.67□□□□□ -0.06
RNF4-209ENST00000507784 PPIAL4DF5H284 164 aa14.67□□□□□ -0.06
RNF4-209ENST00000507784 RFPL4AL1F8VTS6 287 aa14.67□□□□□ -0.06
RNF4-209ENST00000507784 TMEM178BH3BS89 294 aa14.67□□□□□ -0.06
RNF4-209ENST00000507784 PDCD6O75340 191 aa14.67□□□□□ -0.06
RNF4-209ENST00000507784 LY6HO94772 140 aa14.67□□□□□ -0.06
RNF4-209ENST00000507784 TFF1P04155 84 aa14.67□□□□□ -0.06
RNF4-209ENST00000507784 PPIAL4FP0DN26 164 aa14.67□□□□□ -0.06
RNF4-209ENST00000507784 DAOP14920 347 aa14.67□□□□□ -0.06
RNF4-209ENST00000507784 HIST1H1DP16402 221 aaKnown RBP14.67□□□□□ -0.06
RNF4-209ENST00000507784 PRSS3P35030 304 aa14.67□□□□□ -0.06
RNF4-209ENST00000507784 GUCA2AQ02747 115 aa14.67□□□□□ -0.06
RNF4-209ENST00000507784 ARFRP1Q13795 201 aa14.67□□□□□ -0.06
RNF4-209ENST00000507784 ZNF181Q2M3W8 571 aa14.67□□□□□ -0.06
RNF4-209ENST00000507784 SPIN3Q5JUX0 258 aa14.67□□□□□ -0.06
RNF4-209ENST00000507784 HIST2H2BCQ6DN03 193 aa14.67□□□□□ -0.06
RNF4-209ENST00000507784 SIGIRRQ6IA17 410 aa14.67□□□□□ -0.06
RNF4-209ENST00000507784 Q8N402 240 aa14.67□□□□□ -0.06
RNF4-209ENST00000507784 GDPD1Q8N9F7 314 aa14.67□□□□□ -0.06
RNF4-209ENST00000507784 BORCS5Q969J3 196 aa14.67□□□□□ -0.06
RNF4-209ENST00000507784 MARVELD3Q96A59 401 aa14.67□□□□□ -0.06
RNF4-209ENST00000507784 FAAP24Q9BTP7 215 aa14.67□□□□□ -0.06
RNF4-209ENST00000507784 ELF5Q9UKW6 265 aaPredicted RBP14.67□□□□□ -0.06
RNF4-209ENST00000507784 PPIAL4AQ9Y536 164 aa14.67□□□□□ -0.06
RNF4-209ENST00000507784 OOEPA6NGQ2 149 aa14.66□□□□□ -0.06
RNF4-209ENST00000507784 OR2AT4A6NND4 320 aa14.66□□□□□ -0.06
RNF4-209ENST00000507784 MCRIP1C9JLW8 97 aa14.66□□□□□ -0.06
RNF4-209ENST00000507784 H3BUI4 141 aa14.66□□□□□ -0.06
RNF4-209ENST00000507784 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.66□□□□□ -0.06
RNF4-209ENST00000507784 HSPB6O14558 160 aa14.66□□□□□ -0.06
RNF4-209ENST00000507784 TPPPO94811 219 aa14.66□□□□□ -0.06
RNF4-209ENST00000507784 OR2H2O95918 312 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms