RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 PHYHIPQ92561 330 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 UFD1Q92890 307 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 HGDQ93099 445 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 LHX4Q969G2 390 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 C12orf43Q96C57 262 aaKnown RBP1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 C8orf44Q96CB5 159 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 ISOC1Q96CN7 298 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 SLC25A36Q96CQ1 311 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 SH3YL1Q96HL8 342 aaPredicted RBP1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 SAMD8Q96LT4 415 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 RBP7Q96R05 134 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 OR4F4Q96R69 305 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 GPX7Q96SL4 187 aaPredicted RBP1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 CNN2Q99439 309 aaKnown RBP1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 TEAD3Q99594 435 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 DOK1Q99704 481 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 GPA33Q99795 319 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 WFDC6Q9BQY6 131 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 RSPO3Q9BXY4 272 aaPredicted RBP1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 TXNIPQ9H3M7 391 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 DSN1Q9H410 356 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 MCCC2Q9HCC0 563 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 FANCFQ9NPI8 374 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 MEPEQ9NQ76 525 aaPredicted RBP1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 INIPQ9NRY2 104 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 PAK1IP1Q9NWT1 392 aaPredicted RBP1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 BABAM2Q9NXR7 383 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 QPCTLQ9NXS2 382 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 ZNF226Q9NYT6 803 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 PURGQ9UJV8 347 aaKnown RBP1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 DKKL1Q9UK85 242 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 RASD1Q9Y272 281 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 KLF13Q9Y2Y9 288 aaPredicted RBP1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 CAB39Q9Y376 341 aaPredicted RBP1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 RNF115Q9Y4L5 304 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 IER3IP1Q9Y5U9 82 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 WIF1Q9Y5W5 379 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 LRRK1Q38SD2 2015 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 ZFC3H1O60293 1989 aaKnown RBP1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 SPTBN4Q9H254 2564 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 LRP4O75096 1905 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 PLXND1Q9Y4D7 1925 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 IGKV1D-42A0A075B6H8 117 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 TRAV27A0A087WT01 109 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 NPIPA5A0A0B4J1W7 369 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 LOC100506127A0A0U1RQW1 187 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 TRDV1A0A1B0GX56 115 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 A0A1W2PNV4 684 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 TMEM72A0PK05 275 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 FAM168BA1KXE4 195 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 PRSS37A4D1T9 235 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 FBLL1A6NHQ2 334 aaKnown RBP1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 TRIM64BA6NI03 449 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 FAM183AA6NL82 134 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 C12orf71A8MTZ7 269 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 ZNF879B4DU55 563 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 FTCDNL1E5RQL4 147 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 NPIPA7E9PJI5 369 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 NPIPA5E9PKD4 350 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 H3BMQ9 156 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 SULT2B1O00204 365 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 PLPP3O14495 311 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 GPR171O14626 319 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 PDCD5O14737 125 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 NPIPB7O75200 414 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 TRAPPC6AO75865 159 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 GATBO75879 557 aaKnown RBP1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 ARL6IP5O75915 188 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 CLPXO76031 633 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 AQP8O94778 261 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 GABARAPO95166 117 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 ACTL6AO96019 429 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 IGHMP01871 453 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 APOC1P02654 83 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 BGLAPP02818 100 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 KRT8P05787 483 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 IGFBP1P08833 259 aaPredicted RBP1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 HTR1AP08908 422 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 SNRPCP09234 159 aaKnown RBP1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 NPIPA8P0DM63 369 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 CT45A10P0DMU9 189 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 HIST1H1CP16403 213 aaKnown RBP1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 ZNF823P16415 610 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 ZNF43P17038 809 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 SPI1P17947 270 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 NPR2P20594 1047 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 MAPK3P27361 379 aaPredicted RBP1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 GRPRP30550 384 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 FGF9P31371 208 aaPredicted RBP1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 ACVR1BP36896 505 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 AQP2P41181 271 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 RORCP51449 518 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 NOVA1P51513 510 aaKnown RBP1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 EFNA3P52797 238 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 CARD18P57730 90 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 OR2B6P58173 313 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 SSTP61278 116 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 PPIAP62937 165 aaKnown RBP1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 ERVK-25P63136 954 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 ARG2P78540 354 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms