RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 F8VVB4 439 aa13.76□□□□□ -0.21
SNCA-209ENST00000506244 F8VWA3 439 aa13.76□□□□□ -0.21
SNCA-209ENST00000506244 ANGPTL7O43827 346 aa13.76□□□□□ -0.21
SNCA-209ENST00000506244 TK1P04183 234 aa13.76□□□□□ -0.21
SNCA-209ENST00000506244 SFTPBP07988 381 aa13.76□□□□□ -0.21
SNCA-209ENST00000506244 IGHV4-38-2P0DP08 117 aa13.76□□□□□ -0.21
SNCA-209ENST00000506244 EEF1B2P24534 225 aaKnown RBP13.76□□□□□ -0.21
SNCA-209ENST00000506244 NPBWR2P48146 333 aa13.76□□□□□ -0.21
SNCA-209ENST00000506244 HILS1P60008 231 aa13.76□□□□□ -0.21
SNCA-209ENST00000506244 ZP1P60852 638 aa13.76□□□□□ -0.21
SNCA-209ENST00000506244 RPL31P62899 125 aaKnown RBP13.76□□□□□ -0.21
SNCA-209ENST00000506244 IRF3Q14653 427 aa13.76□□□□□ -0.21
SNCA-209ENST00000506244 DDI2Q5TDH0 399 aa13.76□□□□□ -0.21
SNCA-209ENST00000506244 SATL1Q86VE3 508 aa13.76□□□□□ -0.21
SNCA-209ENST00000506244 FAM185AQ8N0U4 392 aa13.76□□□□□ -0.21
SNCA-209ENST00000506244 MS4A15Q8N5U1 240 aa13.76□□□□□ -0.21
SNCA-209ENST00000506244 PXT1Q8NFP0 134 aa13.76□□□□□ -0.21
SNCA-209ENST00000506244 OR51A2Q8NGJ7 313 aa13.76□□□□□ -0.21
SNCA-209ENST00000506244 OR5D13Q8NGL4 314 aa13.76□□□□□ -0.21
SNCA-209ENST00000506244 PPP1R35Q8TAP8 253 aa13.76□□□□□ -0.21
SNCA-209ENST00000506244 TNFAIP8L1Q8WVP5 186 aa13.76□□□□□ -0.21
SNCA-209ENST00000506244 UFD1Q92890 307 aa13.76□□□□□ -0.21
SNCA-209ENST00000506244 OR14A2Q96R54 314 aa13.76□□□□□ -0.21
SNCA-209ENST00000506244 TBX15Q96SF7 602 aa13.76□□□□□ -0.21
SNCA-209ENST00000506244 FAM192AQ9GZU8 254 aa13.76□□□□□ -0.21
SNCA-209ENST00000506244 HMG20AQ9NP66 347 aa13.76□□□□□ -0.21
SNCA-209ENST00000506244 EXOSC4Q9NPD3 245 aaKnown RBP13.76□□□□□ -0.21
SNCA-209ENST00000506244 ZNF69Q9UC07 566 aa13.76□□□□□ -0.21
SNCA-209ENST00000506244 LSM2Q9Y333 95 aaKnown RBP13.76□□□□□ -0.21
SNCA-209ENST00000506244 hCG_1809904A0A1W2PP81 198 aa13.75□□□□□ -0.21
SNCA-209ENST00000506244 A0A1W2PPE2 198 aa13.75□□□□□ -0.21
SNCA-209ENST00000506244 A0A1W2PR64 198 aa13.75□□□□□ -0.21
SNCA-209ENST00000506244 A0A1W2PRV1 198 aa13.75□□□□□ -0.21
SNCA-209ENST00000506244 RNF212BA8MTL3 300 aa13.75□□□□□ -0.21
SNCA-209ENST00000506244 K7N7A8 449 aa13.75□□□□□ -0.21
SNCA-209ENST00000506244 GPX5O75715 221 aa13.75□□□□□ -0.21
SNCA-209ENST00000506244 ZNF93P35789 620 aaPredicted RBP13.75□□□□□ -0.21
SNCA-209ENST00000506244 MTNR1BP49286 362 aa13.75□□□□□ -0.21
SNCA-209ENST00000506244 RPS11P62280 158 aaKnown RBP eCLIP13.75□□□□□ -0.21
SNCA-209ENST00000506244 GUCA2AQ02747 115 aa13.75□□□□□ -0.21
SNCA-209ENST00000506244 GPR50Q13585 617 aa13.75□□□□□ -0.21
SNCA-209ENST00000506244 ASPHD2Q6ICH7 369 aa13.75□□□□□ -0.21
SNCA-209ENST00000506244 C1orf122Q6ZSJ8 110 aa13.75□□□□□ -0.21
SNCA-209ENST00000506244 GDPD3Q7L5L3 318 aa13.75□□□□□ -0.21
SNCA-209ENST00000506244 VMO1Q7Z5L0 202 aa13.75□□□□□ -0.21
SNCA-209ENST00000506244 OR8H2Q8N162 312 aa13.75□□□□□ -0.21
SNCA-209ENST00000506244 OR52N4Q8NGI2 321 aa13.75□□□□□ -0.21
SNCA-209ENST00000506244 ZFAND2BQ8WV99 257 aa13.75□□□□□ -0.21
SNCA-209ENST00000506244 C22orf15Q8WYQ4 148 aa13.75□□□□□ -0.21
SNCA-209ENST00000506244 SNX22Q96L94 193 aa13.75□□□□□ -0.21
SNCA-209ENST00000506244 S100A13Q99584 98 aa13.75□□□□□ -0.21
SNCA-209ENST00000506244 METTL8Q9H825 291 aaKnown RBP13.75□□□□□ -0.21
SNCA-209ENST00000506244 ELL3Q9HB65 397 aaPredicted RBP13.75□□□□□ -0.21
SNCA-209ENST00000506244 FOXJ3Q9UPW0 622 aa13.75□□□□□ -0.21
SNCA-209ENST00000506244 IGHV3OR16-10A0A075B7F0 116 aa13.74□□□□□ -0.21
SNCA-209ENST00000506244 TRBV5-7A0A0A0MS05 114 aa13.74□□□□□ -0.21
SNCA-209ENST00000506244 IGKV1-12A0A0C4DH73 117 aa13.74□□□□□ -0.21
SNCA-209ENST00000506244 GABRPO00591 440 aa13.74□□□□□ -0.21
SNCA-209ENST00000506244 SH2D1BO14796 132 aa13.74□□□□□ -0.21
SNCA-209ENST00000506244 ZNF737O75373 536 aa13.74□□□□□ -0.21
SNCA-209ENST00000506244 IGKV1D-12P01611 117 aa13.74□□□□□ -0.21
SNCA-209ENST00000506244 IGFBP3P17936 291 aaPredicted RBP13.74□□□□□ -0.21
SNCA-209ENST00000506244 GABRR1P24046 479 aa13.74□□□□□ -0.21
SNCA-209ENST00000506244 GABARAPL2P60520 117 aa13.74□□□□□ -0.21
SNCA-209ENST00000506244 DOC2BQ14184 412 aa13.74□□□□□ -0.21
SNCA-209ENST00000506244 RSU1Q15404 277 aa13.74□□□□□ -0.21
SNCA-209ENST00000506244 TBCEQ15813 527 aaPredicted RBP13.74□□□□□ -0.21
SNCA-209ENST00000506244 NCR3LG1Q68D85 454 aa13.74□□□□□ -0.21
SNCA-209ENST00000506244 METAP1DQ6UB28 335 aaPredicted RBP13.74□□□□□ -0.21
SNCA-209ENST00000506244 NKAIN3Q8N8D7 197 aa13.74□□□□□ -0.21
SNCA-209ENST00000506244 CHST4Q8NCG5 386 aa13.74□□□□□ -0.21
SNCA-209ENST00000506244 SGCDQ92629 289 aa13.74□□□□□ -0.21
SNCA-209ENST00000506244 DERL3Q96Q80 235 aa13.74□□□□□ -0.21
SNCA-209ENST00000506244 OR5M11Q96RB7 305 aa13.74□□□□□ -0.21
SNCA-209ENST00000506244 ZMAT3Q9HA38 289 aaKnown RBP13.74□□□□□ -0.21
SNCA-209ENST00000506244 ISYNA1Q9NPH2 558 aa13.74□□□□□ -0.21
SNCA-209ENST00000506244 PCDHB16Q9NRJ7 776 aa13.74□□□□□ -0.21
SNCA-209ENST00000506244 IL36RNQ9UBH0 155 aa13.74□□□□□ -0.21
SNCA-209ENST00000506244 GSTK1Q9Y2Q3 226 aa13.74□□□□□ -0.21
SNCA-209ENST00000506244 TRIM77I1YAP6 450 aa13.73□□□□□ -0.21
SNCA-209ENST00000506244 DENRO43583 198 aaKnown RBP13.73□□□□□ -0.21
SNCA-209ENST00000506244 PSMA1P25786 263 aaKnown RBP13.73□□□□□ -0.21
SNCA-209ENST00000506244 SNU13P55769 128 aaKnown RBP13.73□□□□□ -0.21
SNCA-209ENST00000506244 MLLT11Q13015 90 aaPredicted RBP13.73□□□□□ -0.21
SNCA-209ENST00000506244 ELP2Q6IA86 826 aa13.73□□□□□ -0.21
SNCA-209ENST00000506244 CRIP3Q6Q6R5 217 aa13.73□□□□□ -0.21
SNCA-209ENST00000506244 LHX4Q969G2 390 aa13.73□□□□□ -0.21
SNCA-209ENST00000506244 UNKLQ9H9P5 680 aaKnown RBP13.73□□□□□ -0.21
SNCA-209ENST00000506244 C19orf12Q9NSK7 152 aa13.73□□□□□ -0.21
SNCA-209ENST00000506244 IGHV1-69DA0A0B4J2H0 117 aa13.72□□□□□ -0.21
SNCA-209ENST00000506244 CENPVL3A0A0U1RRI6 287 aa13.72□□□□□ -0.21
SNCA-209ENST00000506244 FUOMA2VDF0 154 aa13.72□□□□□ -0.21
SNCA-209ENST00000506244 MRPS14O60783 128 aaKnown RBP13.72□□□□□ -0.21
SNCA-209ENST00000506244 ZNF780AO75290 641 aaPredicted RBP13.72□□□□□ -0.21
SNCA-209ENST00000506244 RGS9O75916 674 aaPredicted RBP13.72□□□□□ -0.21
SNCA-209ENST00000506244 IGHV1-69P01742 117 aa13.72□□□□□ -0.21
SNCA-209ENST00000506244 HSMCR30P0CW71 290 aa13.72□□□□□ -0.21
SNCA-209ENST00000506244 ZNF44P15621 663 aa13.72□□□□□ -0.21
SNCA-209ENST00000506244 TGFBR2P37173 567 aa13.72□□□□□ -0.21
SNCA-209ENST00000506244 PTGFRP43088 359 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms