RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 EDDM3AQ14507 147 aa16.12■□□□□ 0.17
UBE2D3-220ENST00000505307 ZNF146Q15072 292 aa16.12■□□□□ 0.17
UBE2D3-220ENST00000505307 GRK1Q15835 563 aa16.12■□□□□ 0.17
UBE2D3-220ENST00000505307 TP53I3Q53FA7 332 aa16.12■□□□□ 0.17
UBE2D3-220ENST00000505307 SPIN3Q5JUX0 258 aa16.12■□□□□ 0.17
UBE2D3-220ENST00000505307 SLC25A30Q5SVS4 291 aa16.12■□□□□ 0.17
UBE2D3-220ENST00000505307 FDX2Q6P4F2 183 aa16.12■□□□□ 0.17
UBE2D3-220ENST00000505307 LHFPL2Q6ZUX7 228 aa16.12■□□□□ 0.17
UBE2D3-220ENST00000505307 FAM58AQ8N1B3 248 aa16.12■□□□□ 0.17
UBE2D3-220ENST00000505307 DYNAPQ8N1N2 210 aa16.12■□□□□ 0.17
UBE2D3-220ENST00000505307 OR2G2Q8NGZ5 317 aa16.12■□□□□ 0.17
UBE2D3-220ENST00000505307 SPSB1Q96BD6 273 aa16.12■□□□□ 0.17
UBE2D3-220ENST00000505307 MYCBPQ99417 103 aaPredicted RBP16.12■□□□□ 0.17
UBE2D3-220ENST00000505307 PRSS22Q9GZN4 317 aa16.12■□□□□ 0.17
UBE2D3-220ENST00000505307 ZNF702PQ9H963 129 aa16.12■□□□□ 0.17
UBE2D3-220ENST00000505307 ORC6Q9Y5N6 252 aa16.12■□□□□ 0.17
UBE2D3-220ENST00000505307 SESN1Q9Y6P5 492 aa16.12■□□□□ 0.17
UBE2D3-220ENST00000505307 MGST3O14880 152 aa16.11■□□□□ 0.17
UBE2D3-220ENST00000505307 ZNF20P17024 532 aa16.11■□□□□ 0.17
UBE2D3-220ENST00000505307 ATF1P18846 271 aa16.11■□□□□ 0.17
UBE2D3-220ENST00000505307 GABRR1P24046 479 aa16.11■□□□□ 0.17
UBE2D3-220ENST00000505307 ACTA2P62736 377 aa16.11■□□□□ 0.17
UBE2D3-220ENST00000505307 ACTG2P63267 376 aa16.11■□□□□ 0.17
UBE2D3-220ENST00000505307 EMX1Q04741 257 aaPredicted RBP16.11■□□□□ 0.17
UBE2D3-220ENST00000505307 MEDAGQ5VYS4 303 aa16.11■□□□□ 0.17
UBE2D3-220ENST00000505307 RDH10Q8IZV5 341 aa16.11■□□□□ 0.17
UBE2D3-220ENST00000505307 ZNF676Q8N7Q3 588 aa16.11■□□□□ 0.17
UBE2D3-220ENST00000505307 ADAT3Q96EY9 351 aaPredicted RBP16.11■□□□□ 0.17
UBE2D3-220ENST00000505307 PRKDCP78527 4128 aaKnown RBP16.11■□□□□ 0.17
UBE2D3-220ENST00000505307 FUOMA2VDF0 154 aa16.1■□□□□ 0.17
UBE2D3-220ENST00000505307 MEGF11A6BM72 1044 aa16.1■□□□□ 0.17
UBE2D3-220ENST00000505307 SNTNA6NMZ2 147 aa16.1■□□□□ 0.17
UBE2D3-220ENST00000505307 INMTO95050 263 aa16.1■□□□□ 0.17
UBE2D3-220ENST00000505307 ALDOBP05062 364 aa16.1■□□□□ 0.17
UBE2D3-220ENST00000505307 AZGP1P25311 298 aaKnown RBP16.1■□□□□ 0.17
UBE2D3-220ENST00000505307 POU3F4P49335 361 aa16.1■□□□□ 0.17
UBE2D3-220ENST00000505307 RAB13P51153 203 aa16.1■□□□□ 0.17
UBE2D3-220ENST00000505307 CCR9P51686 369 aa16.1■□□□□ 0.17
UBE2D3-220ENST00000505307 PLA1AQ53H76 456 aa16.1■□□□□ 0.17
UBE2D3-220ENST00000505307 CCBE1Q6UXH8 406 aaPredicted RBP16.1■□□□□ 0.17
UBE2D3-220ENST00000505307 TCF23Q7RTU1 214 aa16.1■□□□□ 0.17
UBE2D3-220ENST00000505307 C11orf44Q8N8P7 122 aa16.1■□□□□ 0.17
UBE2D3-220ENST00000505307 OR52N4Q8NGI2 321 aa16.1■□□□□ 0.17
UBE2D3-220ENST00000505307 MRPL48Q96GC5 212 aaKnown RBP16.1■□□□□ 0.17
UBE2D3-220ENST00000505307 HRASLS5Q96KN8 279 aa16.1■□□□□ 0.17
UBE2D3-220ENST00000505307 MBOAT4Q96T53 435 aa16.1■□□□□ 0.17
UBE2D3-220ENST00000505307 TMEM133Q9H2Q1 129 aa16.1■□□□□ 0.17
UBE2D3-220ENST00000505307 RHOFQ9HBH0 211 aa16.1■□□□□ 0.17
UBE2D3-220ENST00000505307 NEK6Q9HC98 313 aa16.1■□□□□ 0.17
UBE2D3-220ENST00000505307 SERTAD4Q9NUC0 356 aa16.1■□□□□ 0.17
UBE2D3-220ENST00000505307 RBFOX1Q9NWB1 397 aaKnown RBP16.1■□□□□ 0.17
UBE2D3-220ENST00000505307 UBE2J1Q9Y385 318 aaPredicted RBP16.1■□□□□ 0.17
UBE2D3-220ENST00000505307 PCDHGB5Q9Y5G0 923 aa16.1■□□□□ 0.17
UBE2D3-220ENST00000505307 DSCAML1Q8TD84 2053 aa16.09■□□□□ 0.17
UBE2D3-220ENST00000505307 IGHV2-26A0A0B4J1V2 119 aa16.09■□□□□ 0.17
UBE2D3-220ENST00000505307 IGKV1-9A0A0C4DH69 117 aa16.09■□□□□ 0.17
UBE2D3-220ENST00000505307 DAPL1A0PJW8 107 aa16.09■□□□□ 0.17
UBE2D3-220ENST00000505307 SAC3D1A6NKF1 404 aa16.09■□□□□ 0.17
UBE2D3-220ENST00000505307 F2RL2O00254 374 aa16.09■□□□□ 0.17
UBE2D3-220ENST00000505307 SH2D1BO14796 132 aa16.09■□□□□ 0.17
UBE2D3-220ENST00000505307 SLC16A6O15403 523 aa16.09■□□□□ 0.17
UBE2D3-220ENST00000505307 ENTPD6O75354 484 aa16.09■□□□□ 0.17
UBE2D3-220ENST00000505307 FBXO24O75426 580 aa16.09■□□□□ 0.17
UBE2D3-220ENST00000505307 IGHA1P01876 353 aa16.09■□□□□ 0.17
UBE2D3-220ENST00000505307 RPSAP08865 295 aaKnown RBP16.09■□□□□ 0.17
UBE2D3-220ENST00000505307 OCM2P0CE71 109 aa16.09■□□□□ 0.17
UBE2D3-220ENST00000505307 OCMP0CE72 109 aaPredicted RBP16.09■□□□□ 0.17
UBE2D3-220ENST00000505307 NPBWR2P48146 333 aa16.09■□□□□ 0.17
UBE2D3-220ENST00000505307 SNRPGP62308 76 aaKnown RBP16.09■□□□□ 0.17
UBE2D3-220ENST00000505307 PDZK1IP1Q13113 114 aa16.09■□□□□ 0.17
UBE2D3-220ENST00000505307 IL18R1Q13478 541 aa16.09■□□□□ 0.17
UBE2D3-220ENST00000505307 LDLRAD2Q5SZI1 272 aa16.09■□□□□ 0.17
UBE2D3-220ENST00000505307 OR52W1Q6IF63 320 aa16.09■□□□□ 0.17
UBE2D3-220ENST00000505307 OR4S1Q8NGB4 309 aa16.09■□□□□ 0.17
UBE2D3-220ENST00000505307 RNF166Q96A37 237 aaPredicted RBP16.09■□□□□ 0.17
UBE2D3-220ENST00000505307 FGGYQ96C11 551 aa16.09■□□□□ 0.17
UBE2D3-220ENST00000505307 OPALINQ96PE5 141 aa16.09■□□□□ 0.17
UBE2D3-220ENST00000505307 CLEC7AQ9BXN2 247 aa16.09■□□□□ 0.17
UBE2D3-220ENST00000505307 HMG20AQ9NP66 347 aa16.09■□□□□ 0.17
UBE2D3-220ENST00000505307 FRRS1LQ9P0K9 344 aa16.09■□□□□ 0.17
UBE2D3-220ENST00000505307 HHLA2Q9UM44 414 aa16.09■□□□□ 0.17
UBE2D3-220ENST00000505307 J3QRE1 110 aa16.08■□□□□ 0.16
UBE2D3-220ENST00000505307 PSPNO60542 156 aa16.08■□□□□ 0.16
UBE2D3-220ENST00000505307 PEX14O75381 377 aa16.08■□□□□ 0.16
UBE2D3-220ENST00000505307 MT-ND2P03891 347 aa16.08■□□□□ 0.16
UBE2D3-220ENST00000505307 HTR1AP08908 422 aa16.08■□□□□ 0.16
UBE2D3-220ENST00000505307 PRKACAP17612 351 aa16.08■□□□□ 0.16
UBE2D3-220ENST00000505307 BCL3P20749 454 aa16.08■□□□□ 0.16
UBE2D3-220ENST00000505307 P2RX3P56373 397 aa16.08■□□□□ 0.16
UBE2D3-220ENST00000505307 TMEM219Q86XT9 240 aa16.08■□□□□ 0.16
UBE2D3-220ENST00000505307 NDUFA11Q86Y39 141 aa16.08■□□□□ 0.16
UBE2D3-220ENST00000505307 ACBD7Q8N6N7 88 aa16.08■□□□□ 0.16
UBE2D3-220ENST00000505307 NDNFQ8TB73 568 aa16.08■□□□□ 0.16
UBE2D3-220ENST00000505307 RNFT2Q96EX2 444 aa16.08■□□□□ 0.16
UBE2D3-220ENST00000505307 CHST6Q9GZX3 395 aa16.08■□□□□ 0.16
UBE2D3-220ENST00000505307 GAL3ST2Q9H3Q3 398 aa16.08■□□□□ 0.16
UBE2D3-220ENST00000505307 MEX3AA1L020 520 aaKnown RBP16.07■□□□□ 0.16
UBE2D3-220ENST00000505307 XPNPEP2O43895 674 aa16.07■□□□□ 0.16
UBE2D3-220ENST00000505307 ALPLP05186 524 aa16.07■□□□□ 0.16
UBE2D3-220ENST00000505307 HTR1DP28221 377 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms