RNA–Protein interactions for RNA: ENST00000504203.5

MATR3-233, Transcript of matrin 3, human

TSL 2 BASIC

Gene MATR3, Length 2,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-233	ENST00000504203	SPEM2	Q0P670	501 aa		11.23	□□□□□ -0.61
MATR3-233	ENST00000504203	PRDX4	Q13162	271 aa		11.23	□□□□□ -0.61
MATR3-233	ENST00000504203	RNPS1	Q15287	305 aa	Known RBP	11.23	□□□□□ -0.61
MATR3-233	ENST00000504203	IAH1	Q2TAA2	248 aa	Predicted RBP	11.23	□□□□□ -0.61
MATR3-233	ENST00000504203	OR1S2	Q8NGQ3	325 aa		11.23	□□□□□ -0.61
MATR3-233	ENST00000504203	APOBEC3D	Q96AK3	386 aa	Predicted RBP	11.23	□□□□□ -0.61
MATR3-233	ENST00000504203	POM121L2	Q96KW2	1035 aa		11.23	□□□□□ -0.61
MATR3-233	ENST00000504203	CNTNAP3B	Q96NU0	1288 aa		11.23	□□□□□ -0.61
MATR3-233	ENST00000504203	PAPOLG	Q9BWT3	736 aa	Known RBP	11.23	□□□□□ -0.61
MATR3-233	ENST00000504203	CNTNAP3	Q9BZ76	1288 aa		11.23	□□□□□ -0.61
MATR3-233	ENST00000504203	MS4A7	Q9GZW8	240 aa	Predicted RBP	11.23	□□□□□ -0.61
MATR3-233	ENST00000504203	ZNF286A	Q9HBT8	521 aa		11.23	□□□□□ -0.61
MATR3-233	ENST00000504203	GLS2	Q9UI32	602 aa		11.23	□□□□□ -0.61
MATR3-233	ENST00000504203	FAM90A10P	A6NDY2	464 aa		11.22	□□□□□ -0.61
MATR3-233	ENST00000504203	FAM90A18P	A6NE21	464 aa		11.22	□□□□□ -0.61
MATR3-233	ENST00000504203	FAM90A16P	A6NEW6	464 aa		11.22	□□□□□ -0.61
MATR3-233	ENST00000504203	FAM90A20P	A6NIJ5	464 aa		11.22	□□□□□ -0.61
MATR3-233	ENST00000504203	FAM90A8P	A6NJQ4	464 aa		11.22	□□□□□ -0.61
MATR3-233	ENST00000504203	FAM90A7P	A6NKC0	464 aa		11.22	□□□□□ -0.61
MATR3-233	ENST00000504203	FAM90A22P	A8MWA6	464 aa		11.22	□□□□□ -0.61
MATR3-233	ENST00000504203	FAM90A12P	A8MX19	464 aa		11.22	□□□□□ -0.61
MATR3-233	ENST00000504203	FAM90A5P	A8MXJ8	464 aa		11.22	□□□□□ -0.61
MATR3-233	ENST00000504203	FAM90A23P	A8MXZ1	464 aa		11.22	□□□□□ -0.61
MATR3-233	ENST00000504203	FAM90A15P	P0C7V4	464 aa		11.22	□□□□□ -0.61
MATR3-233	ENST00000504203	FAM90A13P	P0C7W8	464 aa		11.22	□□□□□ -0.61
MATR3-233	ENST00000504203	FAM90A14P	P0C7W9	464 aa		11.22	□□□□□ -0.61
MATR3-233	ENST00000504203	FAM90A24P	P0C7X0	464 aa		11.22	□□□□□ -0.61
MATR3-233	ENST00000504203	FCGR2C	P31995	323 aa		11.22	□□□□□ -0.61
MATR3-233	ENST00000504203	TMEM187	Q14656	261 aa		11.22	□□□□□ -0.61
MATR3-233	ENST00000504203	C3AR1	Q16581	482 aa		11.22	□□□□□ -0.61
MATR3-233	ENST00000504203	GGNBP1	Q5YKI7	109 aa		11.22	□□□□□ -0.61
MATR3-233	ENST00000504203	TFAP2E	Q6VUC0	442 aa		11.22	□□□□□ -0.61
MATR3-233	ENST00000504203	NUFIP2	Q7Z417	695 aa	Known RBP	11.22	□□□□□ -0.61
MATR3-233	ENST00000504203	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	11.22	□□□□□ -0.61
MATR3-233	ENST00000504203	ZFP62	Q8NB50	900 aa	Predicted RBP	11.22	□□□□□ -0.61
MATR3-233	ENST00000504203	TOMM40L	Q969M1	308 aa		11.22	□□□□□ -0.61
MATR3-233	ENST00000504203	MRPL24	Q96A35	216 aa	Known RBP	11.22	□□□□□ -0.61
MATR3-233	ENST00000504203	FER1L6-AS2	Q96M78	137 aa		11.22	□□□□□ -0.61
MATR3-233	ENST00000504203	PIGM	Q9H3S5	423 aa		11.22	□□□□□ -0.61
MATR3-233	ENST00000504203	NAA60	Q9H7X0	242 aa		11.22	□□□□□ -0.61
MATR3-233	ENST00000504203	PCNX2	A6NKB5	2137 aa		11.22	□□□□□ -0.61
MATR3-233	ENST00000504203	ARID1A	O14497	2285 aa		11.21	□□□□□ -0.61
MATR3-233	ENST00000504203	KLRC4-KLRK1	H3BQV0	150 aa		11.21	□□□□□ -0.61
MATR3-233	ENST00000504203	OR7C1	O76099	320 aa	Predicted RBP	11.21	□□□□□ -0.61
MATR3-233	ENST00000504203	FAM157C	P0CG43	387 aa		11.21	□□□□□ -0.61
MATR3-233	ENST00000504203	CD79A	P11912	226 aa		11.21	□□□□□ -0.61
MATR3-233	ENST00000504203	ARR3	P36575	388 aa		11.21	□□□□□ -0.61
MATR3-233	ENST00000504203	UCP3	P55916	312 aa		11.21	□□□□□ -0.61
MATR3-233	ENST00000504203	S100A10	P60903	97 aa		11.21	□□□□□ -0.61
MATR3-233	ENST00000504203	RAB1A	P62820	205 aa		11.21	□□□□□ -0.61
MATR3-233	ENST00000504203	CEACAM21	Q3KPI0	293 aa		11.21	□□□□□ -0.61
MATR3-233	ENST00000504203	ZNF585A	Q6P3V2	769 aa		11.21	□□□□□ -0.61
MATR3-233	ENST00000504203	SAXO1	Q8IYX7	474 aa		11.21	□□□□□ -0.61
MATR3-233	ENST00000504203	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	11.21	□□□□□ -0.61
MATR3-233	ENST00000504203	MOB3A	Q96BX8	217 aa		11.21	□□□□□ -0.61
MATR3-233	ENST00000504203	STARD10	Q9Y365	291 aa		11.21	□□□□□ -0.61
MATR3-233	ENST00000504203	LIPG	Q9Y5X9	500 aa		11.21	□□□□□ -0.61
MATR3-233	ENST00000504203		R4GN57	208 aa		11.21	□□□□□ -0.61
MATR3-233	ENST00000504203	ARHGAP21	Q5T5U3	1957 aa		11.21	□□□□□ -0.62
MATR3-233	ENST00000504203	ACTL6A	O96019	429 aa		11.21	□□□□□ -0.62
MATR3-233	ENST00000504203	NGF	P01138	241 aa		11.21	□□□□□ -0.62
MATR3-233	ENST00000504203	HKR1	P10072	659 aa		11.21	□□□□□ -0.62
MATR3-233	ENST00000504203	BCL3	P20749	454 aa		11.21	□□□□□ -0.62
MATR3-233	ENST00000504203	FXYD4	P59646	89 aa		11.21	□□□□□ -0.62
MATR3-233	ENST00000504203	MRPL21	Q7Z2W9	205 aa	Known RBP	11.21	□□□□□ -0.62
MATR3-233	ENST00000504203	TMEM200A	Q86VY9	491 aa		11.21	□□□□□ -0.62
MATR3-233	ENST00000504203	LRTM2	Q8N967	370 aa		11.21	□□□□□ -0.62
MATR3-233	ENST00000504203	RNF141	Q8WVD5	230 aa		11.21	□□□□□ -0.62
MATR3-233	ENST00000504203	TMED6	Q8WW62	240 aa		11.21	□□□□□ -0.62
MATR3-233	ENST00000504203	MARC2	Q969Z3	335 aa		11.21	□□□□□ -0.62
MATR3-233	ENST00000504203	LDAH	Q9H6V9	325 aa		11.21	□□□□□ -0.62
MATR3-233	ENST00000504203	ZNF442	Q9H7R0	627 aa		11.21	□□□□□ -0.62
MATR3-233	ENST00000504203	SLC2A9	Q9NRM0	540 aa		11.21	□□□□□ -0.62
MATR3-233	ENST00000504203	ZNF629	Q9UEG4	869 aa	Predicted RBP	11.21	□□□□□ -0.62
MATR3-233	ENST00000504203	KCNIP3	Q9Y2W7	256 aa		11.21	□□□□□ -0.62
MATR3-233	ENST00000504203	FAM186A	A6NE01	2351 aa		11.21	□□□□□ -0.62
MATR3-233	ENST00000504203	CELSR3	Q9NYQ7	3312 aa		11.21	□□□□□ -0.62
MATR3-233	ENST00000504203	RAB19	A4D1S5	217 aa		11.2	□□□□□ -0.62
MATR3-233	ENST00000504203	CDK2AP1	O14519	115 aa		11.2	□□□□□ -0.62
MATR3-233	ENST00000504203	BET1	O15155	118 aa		11.2	□□□□□ -0.62
MATR3-233	ENST00000504203	DEDD	O75618	318 aa		11.2	□□□□□ -0.62
MATR3-233	ENST00000504203	IFNA21	P01568	189 aa		11.2	□□□□□ -0.62
MATR3-233	ENST00000504203	OR5AC1	P0C628	307 aa		11.2	□□□□□ -0.62
MATR3-233	ENST00000504203	ZNF806	P0C7X5	589 aa		11.2	□□□□□ -0.62
MATR3-233	ENST00000504203	FGF12	P61328	243 aa		11.2	□□□□□ -0.62
MATR3-233	ENST00000504203	BTN1A1	Q13410	526 aa		11.2	□□□□□ -0.62
MATR3-233	ENST00000504203	SLC10A1	Q14973	349 aa		11.2	□□□□□ -0.62
MATR3-233	ENST00000504203	UQCC3	Q6UW78	93 aa		11.2	□□□□□ -0.62
MATR3-233	ENST00000504203		Q6ZS49	121 aa		11.2	□□□□□ -0.62
MATR3-233	ENST00000504203	ZDHHC23	Q8IYP9	409 aa		11.2	□□□□□ -0.62
MATR3-233	ENST00000504203	BATF2	Q8N1L9	274 aa		11.2	□□□□□ -0.62
MATR3-233	ENST00000504203	BPIFC	Q8NFQ6	507 aa		11.2	□□□□□ -0.62
MATR3-233	ENST00000504203	SLAMF9	Q96A28	289 aa		11.2	□□□□□ -0.62
MATR3-233	ENST00000504203	HS3ST6	Q96QI5	342 aa		11.2	□□□□□ -0.62
MATR3-233	ENST00000504203	DOCK7	Q96N67	2140 aa		11.2	□□□□□ -0.62
MATR3-233	ENST00000504203	TAAR5	O14804	337 aa		11.2	□□□□□ -0.62
MATR3-233	ENST00000504203	HAAO	P46952	286 aa		11.2	□□□□□ -0.62
MATR3-233	ENST00000504203	GPM6A	P51674	278 aa		11.2	□□□□□ -0.62
MATR3-233	ENST00000504203	SP6	Q3SY56	376 aa		11.2	□□□□□ -0.62
MATR3-233	ENST00000504203	ABCA11P	Q4W5N1	156 aa		11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms