RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 RAB14P61106 215 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 ERVS71-1P61550 626 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 HERVK_113P61574 105 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 FAM3AP98173 230 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 AESQ08117 197 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 INCA1Q0VD86 236 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 CDC20Q12834 499 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 C16orf72Q14CZ0 275 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 PDK2Q15119 407 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 RGNQ15493 299 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 GUCA2BQ16661 112 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 CEACAM16Q2WEN9 425 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 HLA-DRB5Q30154 266 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 ACSM3Q53FZ2 586 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 METTL21CQ5VZV1 264 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 CST9Q5W186 159 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 TNFAIP8L2Q6P589 184 aaPredicted RBP1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 CD200R1LQ6Q8B3 271 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 FAM19A5Q7Z5A7 132 aaPredicted RBP1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 CAMK2N1Q7Z7J9 78 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 PRSS58Q8IYP2 241 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 LGI3Q8N145 548 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 STK40Q8N2I9 435 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 Q8N9L7 120 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 GPR26Q8NDV2 337 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 OR5M1Q8NGP8 315 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 OR10G6Q8NH81 332 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 C16orf78Q8WTQ4 265 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 BLNKQ8WV28 456 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 SRSF12Q8WXF0 261 aaKnown RBP1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 RAB8BQ92930 207 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 RERGQ96A58 199 aaPredicted RBP1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 TLCD1Q96CP7 247 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 DNAJC19Q96DA6 116 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 FAM210BQ96KR6 192 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 CEP170P1Q96L14 293 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 PGLYRP3Q96LB9 341 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 PPP1R36Q96LQ0 422 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 WFIKKN1Q96NZ8 548 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 QKIQ96PU8 341 aaKnown RBP eCLIP1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 METTL26Q96S19 204 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 TMEM208Q9BTX3 173 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 SUCNR1Q9BXA5 334 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 CDCA4Q9BXL8 241 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 SLC19A3Q9BZV2 496 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 SLC22A4Q9H015 551 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 CDC42EP4Q9H3Q1 356 aaKnown RBP1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 MAP1LC3AQ9H492 121 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 SLCO1B3Q9NPD5 702 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 HEBP1Q9NRV9 189 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 ZNF226Q9NYT6 803 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 TAS2R13Q9NYV9 303 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 IL37Q9NZH6 218 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 STOML2Q9UJZ1 356 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 SIGLEC7Q9Y286 467 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 PCDH11XQ9BZA7 1347 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 PALLDQ8WX93 1383 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 NPHP4O75161 1426 aaPredicted RBP1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 ADGRL3Q9HAR2 1447 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 TRAV8-2A0A0B4J237 113 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 RBFOX3A6NFN3 312 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 C11orf94C9JXX5 98 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 H3BQV1 296 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 NDUFS5O43920 106 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 SS18L1O75177 396 aaPredicted RBP1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 REM1O75628 298 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 HLA-DRAP01903 254 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 TCRBP04435 133 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 HLA-DPB1P04440 258 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 IFNA16P05015 189 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 CTSLP07711 333 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 ADRB3P13945 408 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 PRPS1L1P21108 318 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 MSNP26038 577 aaKnown RBP1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 CD70P32970 193 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 PRSS3P35030 304 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 RCVRNP35243 200 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 APLNRP35414 380 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 CDKN2BP42772 138 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 CXCL5P42830 114 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 LGALS7P47929 136 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 HSPA13P48723 471 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 OR4D2P58180 307 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 C1QTNF8P60827 252 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 LSM6P62312 80 aaKnown RBP1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 POLR2GP62487 172 aaKnown RBP eCLIP1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 HBG1P69891 147 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 HBG2P69892 147 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 ARG2P78540 354 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 SARNPP82979 210 aaKnown RBP1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 PRDX1Q06830 199 aaKnown RBP1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 SRSF6Q13247 344 aaKnown RBP1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 FAM53BQ14153 422 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 GINS1Q14691 196 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 PMVKQ15126 192 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 IRF4Q15306 451 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 SHHQ15465 462 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 PRSS8Q16651 343 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 C4orf26Q17RF5 130 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 TMEM183BQ1AE95 376 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms