RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 C17orf100A8MU93 164 aa6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 DEFB108AA8MXU0 73 aa6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 ZNF736B4DX44 427 aaPredicted RBP6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 MCRIP1C9JLW8 97 aa6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 E7EQL1 145 aa6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 H7C1Q1 480 aa6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 GEMIN2O14893 280 aaKnown RBP6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 SPRY3O43610 288 aa6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 LANCL1O43813 399 aa6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 KNG1P01042 644 aa6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 IGHV1-46P01743 117 aa6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 IRF2P14316 349 aa6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 GRNP28799 593 aaKnown RBP6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 SLC6A1P30531 599 aa6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 MDH2P40926 338 aaKnown RBP6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 KCNJ3P48549 501 aa6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 TAS2R46P59540 309 aa6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 ZMYND11Q15326 602 aa6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 CDSNQ15517 529 aa6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 SRSF7Q16629 238 aaKnown RBP eCLIP6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 PIGYQ3MUY2 71 aa6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 RNASE12Q5GAN4 147 aaKnown RBP6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 NKAPLQ5M9Q1 402 aa6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 OLFML2AQ68BL7 652 aa6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 WDR82Q6UXN9 313 aa6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 TRAPPC6BQ86SZ2 158 aa6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 WDR86Q86TI4 376 aa6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 Q8TCH9 128 aa6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 BBC3Q96PG8 261 aaPredicted RBP6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 OR2V2Q96R30 315 aa6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 CMSS1Q9BQ75 279 aaKnown RBP6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 DPAGT1Q9H3H5 408 aa6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 ZMAT3Q9HA38 289 aaKnown RBP6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 DYNLRB1Q9NP97 96 aa6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 NPDC1Q9NQX5 325 aaPredicted RBP6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 CISD1Q9NZ45 108 aaKnown RBP6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 TREM2Q9NZC2 230 aa6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 RCC2Q9P258 522 aaKnown RBP6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 ANAPC10Q9UM13 185 aa6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 MGAT4AQ9UM21 535 aa6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 DSPP15924 2871 aaKnown RBP6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 LINC00854A0A1B0GVQ3 168 aa6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 MEIOCA2RUB1 952 aa6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 LRRC30A6NM36 301 aa6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 SRRM5B3KS81 715 aa6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 DEGS1O15121 323 aa6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 RHBDL1O75783 438 aa6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 CD74P04233 296 aa6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 IGFBP2P18065 325 aa6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 NAT1P18440 290 aa6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 GLRA1P23415 457 aa6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 RAG2P55895 527 aa6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 SNRPD2P62316 118 aaKnown RBP6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 IKZF1Q13422 519 aa6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 DAZAP2Q15038 168 aaPredicted RBP6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 ATAD3CQ5T2N8 411 aa6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 SHEQ5VZ18 495 aa6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 SIGIRRQ6IA17 410 aa6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 STEAP1BQ6NZ63 245 aa6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 CCBE1Q6UXH8 406 aaPredicted RBP6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 ACP7Q6ZNF0 438 aa6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 GDPD3Q7L5L3 318 aa6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 C6orf201Q7Z4U5 140 aa6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 NRARPQ7Z6K4 114 aa6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 HOGA1Q86XE5 327 aa6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 C11orf53Q8IXP5 236 aa6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 C1orf87Q8N0U7 546 aa6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 MUC15Q8N387 334 aa6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 PPP1R35Q8TAP8 253 aa6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 NUDCD2Q8WVJ2 157 aa6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 ITLN1Q8WWA0 313 aa6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 GCDHQ92947 438 aaPredicted RBP6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 FBXW5Q969U6 566 aa6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 PIK3IP1Q96FE7 263 aa6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 HRASLSQ9HDD0 168 aa6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 C12orf4Q9NQ89 552 aa6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 DECR2Q9NUI1 292 aa6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 C1orf123Q9NWV4 160 aa6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 SCP2D1Q9UJQ7 156 aa6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 KCNK7Q9Y2U2 307 aa6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 NUBP2Q9Y5Y2 271 aa6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 SPENQ96T58 3664 aaKnown RBP6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 HIVEP3Q5T1R4 2406 aa6.88□□□□□ -1.31
TOPBP1-202ENST00000503338 TRBV6-6A0A0A6YYG2 114 aa6.87□□□□□ -1.31
TOPBP1-202ENST00000503338 WIPF3A6NGB9 483 aa6.87□□□□□ -1.31
TOPBP1-202ENST00000503338 DISC1C4P0D8 188 aa6.87□□□□□ -1.31
TOPBP1-202ENST00000503338 RAB3DO95716 219 aa6.87□□□□□ -1.31
TOPBP1-202ENST00000503338 IFNA6P05013 189 aa6.87□□□□□ -1.31
TOPBP1-202ENST00000503338 PTHLHP12272 177 aa6.87□□□□□ -1.31
TOPBP1-202ENST00000503338 ZNF44P15621 663 aa6.87□□□□□ -1.31
TOPBP1-202ENST00000503338 LMO1P25800 156 aa6.87□□□□□ -1.31
TOPBP1-202ENST00000503338 LOXP28300 417 aaPredicted RBP6.87□□□□□ -1.31
TOPBP1-202ENST00000503338 RFX2P48378 723 aa6.87□□□□□ -1.31
TOPBP1-202ENST00000503338 PPOXP50336 477 aa6.87□□□□□ -1.31
TOPBP1-202ENST00000503338 GUCA2AQ02747 115 aa6.87□□□□□ -1.31
TOPBP1-202ENST00000503338 RNASE10Q5GAN6 216 aaKnown RBP6.87□□□□□ -1.31
TOPBP1-202ENST00000503338 VAX1Q5SQQ9 334 aa6.87□□□□□ -1.31
TOPBP1-202ENST00000503338 AGAP6Q5VW22 663 aa6.87□□□□□ -1.31
TOPBP1-202ENST00000503338 PRAMEF6Q5VXH4 476 aa6.87□□□□□ -1.31
TOPBP1-202ENST00000503338 Q6ZS49 121 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms