RNA–Protein interactions for RNA: ENST00000503057.5

LIMCH1-205, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-205ENST00000503057 DCAF12L2Q5VW00 463 aa9.44□□□□□ -0.9
LIMCH1-205ENST00000503057 RGS7BPQ6MZT1 257 aaPredicted RBP9.44□□□□□ -0.9
LIMCH1-205ENST00000503057 TMEM88Q6PEY1 159 aa9.44□□□□□ -0.9
LIMCH1-205ENST00000503057 OR10V1Q8NGI7 309 aa9.44□□□□□ -0.9
LIMCH1-205ENST00000503057 AKR1E2Q96JD6 320 aa9.44□□□□□ -0.9
LIMCH1-205ENST00000503057 RASL12Q9NYN1 266 aa9.44□□□□□ -0.9
LIMCH1-205ENST00000503057 KNL1Q8NG31 2342 aa9.44□□□□□ -0.9
LIMCH1-205ENST00000503057 A0A0J9YW62 118 aa9.44□□□□□ -0.9
LIMCH1-205ENST00000503057 IL3RAP26951 378 aa9.44□□□□□ -0.9
LIMCH1-205ENST00000503057 LTBRP36941 435 aa9.44□□□□□ -0.9
LIMCH1-205ENST00000503057 THBS3P49746 956 aa9.44□□□□□ -0.9
LIMCH1-205ENST00000503057 LIAT1Q6ZQX7 453 aa9.44□□□□□ -0.9
LIMCH1-205ENST00000503057 LINC00596Q86U02 117 aa9.44□□□□□ -0.9
LIMCH1-205ENST00000503057 SKA3Q8IX90 412 aa9.44□□□□□ -0.9
LIMCH1-205ENST00000503057 TUSC5Q8IXB3 177 aa9.44□□□□□ -0.9
LIMCH1-205ENST00000503057 OR2M7Q8NG81 312 aa9.44□□□□□ -0.9
LIMCH1-205ENST00000503057 ACTR3CQ9C0K3 210 aaPredicted RBP9.44□□□□□ -0.9
LIMCH1-205ENST00000503057 EGLN1Q9GZT9 426 aa9.44□□□□□ -0.9
LIMCH1-205ENST00000503057 WDR13Q9H1Z4 485 aa9.44□□□□□ -0.9
LIMCH1-205ENST00000503057 SMOC1Q9H4F8 434 aa9.44□□□□□ -0.9
LIMCH1-205ENST00000503057 PILRBQ9UKJ0 227 aa9.44□□□□□ -0.9
LIMCH1-205ENST00000503057 MDFIC2A0A1B0GVS7 189 aa9.44□□□□□ -0.9
LIMCH1-205ENST00000503057 TRDCB7Z8K6 153 aa9.44□□□□□ -0.9
LIMCH1-205ENST00000503057 ONECUT2O95948 504 aa9.44□□□□□ -0.9
LIMCH1-205ENST00000503057 CCL2P13500 99 aa9.44□□□□□ -0.9
LIMCH1-205ENST00000503057 TMEM33P57088 247 aa9.44□□□□□ -0.9
LIMCH1-205ENST00000503057 OR2B11Q5JQS5 317 aa9.44□□□□□ -0.9
LIMCH1-205ENST00000503057 CISD2Q8N5K1 135 aaKnown RBP9.44□□□□□ -0.9
LIMCH1-205ENST00000503057 ZNRF4Q8WWF5 429 aa9.44□□□□□ -0.9
LIMCH1-205ENST00000503057 RGP1Q92546 391 aaPredicted RBP9.44□□□□□ -0.9
LIMCH1-205ENST00000503057 PATE3B3GLJ2 98 aa9.44□□□□□ -0.9
LIMCH1-205ENST00000503057 ZFP82Q8N141 532 aa9.44□□□□□ -0.9
LIMCH1-205ENST00000503057 ABHD3Q8WU67 409 aa9.44□□□□□ -0.9
LIMCH1-205ENST00000503057 ERRFI1Q9UJM3 462 aaPredicted RBP9.44□□□□□ -0.9
LIMCH1-205ENST00000503057 BCL3P20749 454 aa9.43□□□□□ -0.9
LIMCH1-205ENST00000503057 MAGEA5P43359 124 aa9.43□□□□□ -0.9
LIMCH1-205ENST00000503057 PPP1CBP62140 327 aa9.43□□□□□ -0.9
LIMCH1-205ENST00000503057 MPV17LQ2QL34 196 aa9.43□□□□□ -0.9
LIMCH1-205ENST00000503057 RPL7L1Q6DKI1 246 aaKnown RBP9.43□□□□□ -0.9
LIMCH1-205ENST00000503057 LCN15Q6UWW0 184 aa9.43□□□□□ -0.9
LIMCH1-205ENST00000503057 LYPD8Q6UX82 237 aa9.43□□□□□ -0.9
LIMCH1-205ENST00000503057 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.43□□□□□ -0.9
LIMCH1-205ENST00000503057 OR2C3Q8N628 320 aa9.43□□□□□ -0.9
LIMCH1-205ENST00000503057 ERGIC1Q969X5 290 aa9.43□□□□□ -0.9
LIMCH1-205ENST00000503057 PRR13Q9NZ81 148 aa9.43□□□□□ -0.9
LIMCH1-205ENST00000503057 GBF1Q92538 1859 aa9.43□□□□□ -0.9
LIMCH1-205ENST00000503057 FABP6P51161 128 aa9.43□□□□□ -0.9
LIMCH1-205ENST00000503057 ACOT6Q3I5F7 207 aaPredicted RBP9.43□□□□□ -0.9
LIMCH1-205ENST00000503057 CLEC18AA5D8T8 446 aa9.43□□□□□ -0.9
LIMCH1-205ENST00000503057 TGOLN2O43493 480 aa9.43□□□□□ -0.9
LIMCH1-205ENST00000503057 LMX1BO60663 402 aa9.43□□□□□ -0.9
LIMCH1-205ENST00000503057 CST7O76096 145 aa9.43□□□□□ -0.9
LIMCH1-205ENST00000503057 APOA2P02652 100 aa9.43□□□□□ -0.9
LIMCH1-205ENST00000503057 COX5AP20674 150 aa9.43□□□□□ -0.9
LIMCH1-205ENST00000503057 ADAM5Q6NVV9 412 aa9.43□□□□□ -0.9
LIMCH1-205ENST00000503057 TRAT1Q6PIZ9 186 aa9.43□□□□□ -0.9
LIMCH1-205ENST00000503057 GCNT2Q8N0V5 402 aa9.43□□□□□ -0.9
LIMCH1-205ENST00000503057 CLEC18CQ8NCF0 446 aa9.43□□□□□ -0.9
LIMCH1-205ENST00000503057 PINX1Q96BK5 328 aaKnown RBP9.43□□□□□ -0.9
LIMCH1-205ENST00000503057 CD74P04233 296 aa9.43□□□□□ -0.9
LIMCH1-205ENST00000503057 FOXO1Q12778 655 aa9.43□□□□□ -0.9
LIMCH1-205ENST00000503057 IGFBP7Q16270 282 aa9.43□□□□□ -0.9
LIMCH1-205ENST00000503057 ZNF239Q16600 458 aaKnown RBP9.43□□□□□ -0.9
LIMCH1-205ENST00000503057 HES3Q5TGS1 186 aa9.43□□□□□ -0.9
LIMCH1-205ENST00000503057 C2CD4CQ8TF44 421 aa9.43□□□□□ -0.9
LIMCH1-205ENST00000503057 SLC39A7Q92504 469 aa9.43□□□□□ -0.9
LIMCH1-205ENST00000503057 SERTAD4Q9NUC0 356 aa9.43□□□□□ -0.9
LIMCH1-205ENST00000503057 GFOD1Q9NXC2 390 aa9.43□□□□□ -0.9
LIMCH1-205ENST00000503057 ADAM11O75078 769 aa9.42□□□□□ -0.9
LIMCH1-205ENST00000503057 NGFP01138 241 aa9.42□□□□□ -0.9
LIMCH1-205ENST00000503057 CELA2AP08217 269 aa9.42□□□□□ -0.9
LIMCH1-205ENST00000503057 ZNF250P15622 560 aa9.42□□□□□ -0.9
LIMCH1-205ENST00000503057 CEACAM6P40199 344 aa9.42□□□□□ -0.9
LIMCH1-205ENST00000503057 KIAA0141Q14154 515 aaPredicted RBP9.42□□□□□ -0.9
LIMCH1-205ENST00000503057 ZNF362Q5T0B9 420 aaPredicted RBP9.42□□□□□ -0.9
LIMCH1-205ENST00000503057 TBC1D26Q86UD7 250 aa9.42□□□□□ -0.9
LIMCH1-205ENST00000503057 CPEB3Q8NE35 698 aaKnown RBP9.42□□□□□ -0.9
LIMCH1-205ENST00000503057 RXFP4Q8TDU9 374 aa9.42□□□□□ -0.9
LIMCH1-205ENST00000503057 TVP23CQ96ET8 276 aa9.42□□□□□ -0.9
LIMCH1-205ENST00000503057 A0A1W2PQM1 296 aa9.42□□□□□ -0.9
LIMCH1-205ENST00000503057 ERVH48-1M5A8F1 160 aa9.42□□□□□ -0.9
LIMCH1-205ENST00000503057 NDUFA6P56556 154 aa9.42□□□□□ -0.9
LIMCH1-205ENST00000503057 NR2C2APQ86WQ0 139 aa9.42□□□□□ -0.9
LIMCH1-205ENST00000503057 TMEM123Q8N131 208 aa9.42□□□□□ -0.9
LIMCH1-205ENST00000503057 ZNF561Q8N587 486 aa9.42□□□□□ -0.9
LIMCH1-205ENST00000503057 CORO2AQ92828 525 aa9.42□□□□□ -0.9
LIMCH1-205ENST00000503057 LHX4Q969G2 390 aa9.42□□□□□ -0.9
LIMCH1-205ENST00000503057 FAM131CQ96AQ9 280 aa9.42□□□□□ -0.9
LIMCH1-205ENST00000503057 PLXNA2O75051 1894 aa9.42□□□□□ -0.9
LIMCH1-205ENST00000503057 TSTD3H0UI37 97 aa9.42□□□□□ -0.9
LIMCH1-205ENST00000503057 PRRG2O14669 202 aa9.42□□□□□ -0.9
LIMCH1-205ENST00000503057 COX6A1P12074 109 aa9.42□□□□□ -0.9
LIMCH1-205ENST00000503057 PIGYQ3MUY2 71 aa9.42□□□□□ -0.9
LIMCH1-205ENST00000503057 FNDC7Q5VTL7 733 aa9.42□□□□□ -0.9
LIMCH1-205ENST00000503057 APCDD1LQ8NCL9 501 aa9.42□□□□□ -0.9
LIMCH1-205ENST00000503057 OR11H4Q8NGC9 324 aa9.42□□□□□ -0.9
LIMCH1-205ENST00000503057 H1FXQ92522 213 aaKnown RBP9.42□□□□□ -0.9
LIMCH1-205ENST00000503057 SLC2A9Q9NRM0 540 aa9.42□□□□□ -0.9
LIMCH1-205ENST00000503057 ANAPC1Q9H1A4 1944 aa9.42□□□□□ -0.9
LIMCH1-205ENST00000503057 A0A0B4J293 547 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms