RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 FAM90A16PA6NEW6 464 aa14.3□□□□□ -0.12
VCAN-204ENST00000502527 FAM90A20PA6NIJ5 464 aa14.3□□□□□ -0.12
VCAN-204ENST00000502527 FAM90A8PA6NJQ4 464 aa14.3□□□□□ -0.12
VCAN-204ENST00000502527 FAM90A7PA6NKC0 464 aa14.3□□□□□ -0.12
VCAN-204ENST00000502527 FAM90A22PA8MWA6 464 aa14.3□□□□□ -0.12
VCAN-204ENST00000502527 FAM90A12PA8MX19 464 aa14.3□□□□□ -0.12
VCAN-204ENST00000502527 FAM90A5PA8MXJ8 464 aa14.3□□□□□ -0.12
VCAN-204ENST00000502527 FAM90A23PA8MXZ1 464 aa14.3□□□□□ -0.12
VCAN-204ENST00000502527 SIGLEC5O15389 551 aa14.3□□□□□ -0.12
VCAN-204ENST00000502527 NUPL2O15504 423 aaKnown RBP14.3□□□□□ -0.12
VCAN-204ENST00000502527 ATG12O94817 140 aa14.3□□□□□ -0.12
VCAN-204ENST00000502527 FAM90A15PP0C7V4 464 aa14.3□□□□□ -0.12
VCAN-204ENST00000502527 FAM90A13PP0C7W8 464 aa14.3□□□□□ -0.12
VCAN-204ENST00000502527 FAM90A14PP0C7W9 464 aa14.3□□□□□ -0.12
VCAN-204ENST00000502527 FAM90A24PP0C7X0 464 aa14.3□□□□□ -0.12
VCAN-204ENST00000502527 COX5BP10606 129 aa14.3□□□□□ -0.12
VCAN-204ENST00000502527 DCAF10Q5QP82 559 aa14.3□□□□□ -0.12
VCAN-204ENST00000502527 CDCP2Q5VXM1 449 aa14.3□□□□□ -0.12
VCAN-204ENST00000502527 RPL7L1Q6DKI1 246 aaKnown RBP14.3□□□□□ -0.12
VCAN-204ENST00000502527 IL34Q6ZMJ4 242 aa14.3□□□□□ -0.12
VCAN-204ENST00000502527 LRTM2Q8N967 370 aa14.3□□□□□ -0.12
VCAN-204ENST00000502527 Q8NFD4 153 aa14.3□□□□□ -0.12
VCAN-204ENST00000502527 MOB3AQ96BX8 217 aa14.3□□□□□ -0.12
VCAN-204ENST00000502527 PRRX2Q99811 253 aa14.3□□□□□ -0.12
VCAN-204ENST00000502527 REPIN1Q9BWE0 567 aaKnown RBP14.3□□□□□ -0.12
VCAN-204ENST00000502527 PAPOLGQ9BWT3 736 aaKnown RBP14.3□□□□□ -0.12
VCAN-204ENST00000502527 TTTY12Q9BZ98 90 aa14.3□□□□□ -0.12
VCAN-204ENST00000502527 NKX6-2Q9C056 277 aaPredicted RBP14.3□□□□□ -0.12
VCAN-204ENST00000502527 STARD10Q9Y365 291 aa14.3□□□□□ -0.12
VCAN-204ENST00000502527 LNP1A1A4G5 178 aa14.29□□□□□ -0.12
VCAN-204ENST00000502527 FAM166BA8MTA8 275 aa14.29□□□□□ -0.12
VCAN-204ENST00000502527 OR7C1O76099 320 aaPredicted RBP14.29□□□□□ -0.12
VCAN-204ENST00000502527 CST4P01036 141 aa14.29□□□□□ -0.12
VCAN-204ENST00000502527 OR5AC1P0C628 307 aa14.29□□□□□ -0.12
VCAN-204ENST00000502527 CCNOP22674 350 aa14.29□□□□□ -0.12
VCAN-204ENST00000502527 ITGA3P26006 1051 aa14.29□□□□□ -0.12
VCAN-204ENST00000502527 SP6Q3SY56 376 aa14.29□□□□□ -0.12
VCAN-204ENST00000502527 C9orf135Q5VTT2 229 aa14.29□□□□□ -0.12
VCAN-204ENST00000502527 OR56B2PQ8NGI1 322 aa14.29□□□□□ -0.12
VCAN-204ENST00000502527 HES7Q9BYE0 225 aa14.29□□□□□ -0.12
VCAN-204ENST00000502527 PRRG4Q9BZD6 226 aa14.29□□□□□ -0.12
VCAN-204ENST00000502527 PLEKHA2Q9HB19 425 aa14.29□□□□□ -0.12
VCAN-204ENST00000502527 SLC2A9Q9NRM0 540 aa14.29□□□□□ -0.12
VCAN-204ENST00000502527 PQLC2LA1A4F0 135 aa14.29□□□□□ -0.12
VCAN-204ENST00000502527 ZNF724A8MTY0 619 aa14.29□□□□□ -0.12
VCAN-204ENST00000502527 DNASE2O00115 360 aaPredicted RBP14.29□□□□□ -0.12
VCAN-204ENST00000502527 ZNF205O95201 554 aa14.29□□□□□ -0.12
VCAN-204ENST00000502527 HLA-HP01893 362 aa14.29□□□□□ -0.12
VCAN-204ENST00000502527 MAGEA5P43359 124 aa14.29□□□□□ -0.12
VCAN-204ENST00000502527 HERV-K104P61576 105 aa14.29□□□□□ -0.12
VCAN-204ENST00000502527 SPEM2Q0P670 501 aa14.29□□□□□ -0.12
VCAN-204ENST00000502527 PDCD1Q15116 288 aa14.29□□□□□ -0.12
VCAN-204ENST00000502527 TSNAXQ99598 290 aaKnown RBP14.29□□□□□ -0.12
VCAN-204ENST00000502527 RNF122Q9H9V4 155 aa14.29□□□□□ -0.12
VCAN-204ENST00000502527 LSM5Q9Y4Y9 91 aaKnown RBP14.29□□□□□ -0.12
VCAN-204ENST00000502527 ZDBF2Q9HCK1 2354 aa14.28□□□□□ -0.12
VCAN-204ENST00000502527 C5orf49A4QMS7 147 aa14.28□□□□□ -0.12
VCAN-204ENST00000502527 ABCD4O14678 606 aa14.28□□□□□ -0.12
VCAN-204ENST00000502527 JTBO76095 146 aa14.28□□□□□ -0.12
VCAN-204ENST00000502527 ACTL6AO96019 429 aa14.28□□□□□ -0.12
VCAN-204ENST00000502527 GAPDHP04406 335 aaKnown RBP14.28□□□□□ -0.12
VCAN-204ENST00000502527 NPBWR2P48146 333 aa14.28□□□□□ -0.12
VCAN-204ENST00000502527 ARHGDIBP52566 201 aa14.28□□□□□ -0.12
VCAN-204ENST00000502527 PRDX4Q13162 271 aa14.28□□□□□ -0.12
VCAN-204ENST00000502527 PHLDA2Q53GA4 152 aa14.28□□□□□ -0.12
VCAN-204ENST00000502527 OR2A2Q6IF42 318 aa14.28□□□□□ -0.12
VCAN-204ENST00000502527 LIAT1Q6ZQX7 453 aa14.28□□□□□ -0.12
VCAN-204ENST00000502527 MRPL21Q7Z2W9 205 aaKnown RBP14.28□□□□□ -0.12
VCAN-204ENST00000502527 SAXO1Q8IYX7 474 aa14.28□□□□□ -0.12
VCAN-204ENST00000502527 SVBPQ8N300 66 aa14.28□□□□□ -0.12
VCAN-204ENST00000502527 CCDC71LQ8N9Z2 235 aa14.28□□□□□ -0.12
VCAN-204ENST00000502527 APOBEC3DQ96AK3 386 aaPredicted RBP14.28□□□□□ -0.12
VCAN-204ENST00000502527 APH1AQ96BI3 265 aa14.28□□□□□ -0.12
VCAN-204ENST00000502527 SMIM8Q96KF7 97 aa14.28□□□□□ -0.12
VCAN-204ENST00000502527 ZFP57Q9NU63 452 aa14.28□□□□□ -0.12
VCAN-204ENST00000502527 A0A1W2PNU3 283 aaPredicted RBP14.27□□□□□ -0.12
VCAN-204ENST00000502527 PRSS44E7EML9 344 aa14.27□□□□□ -0.12
VCAN-204ENST00000502527 H7C1Q1 480 aa14.27□□□□□ -0.12
VCAN-204ENST00000502527 TRIM77I1YAP6 450 aa14.27□□□□□ -0.12
VCAN-204ENST00000502527 TPD52L2O43399 206 aaKnown RBP14.27□□□□□ -0.12
VCAN-204ENST00000502527 LRP3O75074 770 aa14.27□□□□□ -0.12
VCAN-204ENST00000502527 AKR1C2P52895 323 aa14.27□□□□□ -0.12
VCAN-204ENST00000502527 PLGLB1Q02325 96 aa14.27□□□□□ -0.12
VCAN-204ENST00000502527 AKR1C1Q04828 323 aa14.27□□□□□ -0.12
VCAN-204ENST00000502527 PJVKQ0ZLH3 352 aa14.27□□□□□ -0.12
VCAN-204ENST00000502527 MST1LQ2TV78 715 aa14.27□□□□□ -0.12
VCAN-204ENST00000502527 LINC00696Q6ZRV3 163 aa14.27□□□□□ -0.12
VCAN-204ENST00000502527 LGI3Q8N145 548 aa14.27□□□□□ -0.12
VCAN-204ENST00000502527 TMEM251Q8N6I4 163 aa14.27□□□□□ -0.12
VCAN-204ENST00000502527 PLA2G3Q9NZ20 509 aa14.27□□□□□ -0.12
VCAN-204ENST00000502527 ZNF629Q9UEG4 869 aaPredicted RBP14.27□□□□□ -0.12
VCAN-204ENST00000502527 E5RGE8 158 aa14.27□□□□□ -0.13
VCAN-204ENST00000502527 SCGB1D2O95969 90 aa14.27□□□□□ -0.13
VCAN-204ENST00000502527 ARR3P36575 388 aa14.27□□□□□ -0.13
VCAN-204ENST00000502527 CEACAM21Q3KPI0 293 aa14.27□□□□□ -0.13
VCAN-204ENST00000502527 ZDHHC23Q8IYP9 409 aa14.27□□□□□ -0.13
VCAN-204ENST00000502527 OR5L1Q8NGL2 311 aa14.27□□□□□ -0.13
VCAN-204ENST00000502527 C18orf12Q96KH6 178 aa14.27□□□□□ -0.13
VCAN-204ENST00000502527 RSRP1Q9BUV0 290 aa14.27□□□□□ -0.13
VCAN-204ENST00000502527 PLSCR2Q9NRY7 297 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms