RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 TMEM14AQ9Y6G1 99 aa11.66□□□□□ -0.54
TRAF4-212ENST00000498540 R4GMQ9 66 aa11.66□□□□□ -0.54
TRAF4-212ENST00000498540 KIAA2026Q5HYC2 2103 aa11.66□□□□□ -0.54
TRAF4-212ENST00000498540 DHRS7CA6NNS2 312 aa11.65□□□□□ -0.54
TRAF4-212ENST00000498540 H3BSH0 61 aa11.65□□□□□ -0.54
TRAF4-212ENST00000498540 CST1P01037 141 aa11.65□□□□□ -0.54
TRAF4-212ENST00000498540 IGLV1-47P01700 117 aa11.65□□□□□ -0.54
TRAF4-212ENST00000498540 PEX2P28328 305 aa11.65□□□□□ -0.54
TRAF4-212ENST00000498540 DUSP1P28562 367 aa11.65□□□□□ -0.54
TRAF4-212ENST00000498540 GDNFP39905 211 aa11.65□□□□□ -0.54
TRAF4-212ENST00000498540 MS4A2Q01362 244 aa11.65□□□□□ -0.54
TRAF4-212ENST00000498540 ZNF91Q05481 1191 aa11.65□□□□□ -0.54
TRAF4-212ENST00000498540 GK3PQ14409 553 aa11.65□□□□□ -0.54
TRAF4-212ENST00000498540 UBE2V2Q15819 145 aa11.65□□□□□ -0.54
TRAF4-212ENST00000498540 NKAPLQ5M9Q1 402 aa11.65□□□□□ -0.54
TRAF4-212ENST00000498540 ZNF322Q6U7Q0 402 aaPredicted RBP11.65□□□□□ -0.54
TRAF4-212ENST00000498540 SLC25A26Q70HW3 274 aa11.65□□□□□ -0.54
TRAF4-212ENST00000498540 OR2W3Q7Z3T1 314 aa11.65□□□□□ -0.54
TRAF4-212ENST00000498540 EGFL6Q8IUX8 553 aa11.65□□□□□ -0.54
TRAF4-212ENST00000498540 HS3ST5Q8IZT8 346 aa11.65□□□□□ -0.54
TRAF4-212ENST00000498540 TFAP2CQ92754 450 aa11.65□□□□□ -0.54
TRAF4-212ENST00000498540 EMG1Q92979 244 aaKnown RBP11.65□□□□□ -0.54
TRAF4-212ENST00000498540 MCRIP2Q9BUT9 160 aaKnown RBP11.65□□□□□ -0.54
TRAF4-212ENST00000498540 LEUTXA8MZ59 168 aa11.64□□□□□ -0.55
TRAF4-212ENST00000498540 E2F6O75461 281 aa11.64□□□□□ -0.55
TRAF4-212ENST00000498540 NHLRC4P0CG21 123 aaPredicted RBP11.64□□□□□ -0.55
TRAF4-212ENST00000498540 RAP2AP10114 183 aa11.64□□□□□ -0.55
TRAF4-212ENST00000498540 CCL1P22362 96 aa11.64□□□□□ -0.55
TRAF4-212ENST00000498540 CDK2P24941 298 aa11.64□□□□□ -0.55
TRAF4-212ENST00000498540 OR3A1P47881 315 aa11.64□□□□□ -0.55
TRAF4-212ENST00000498540 P2RX3P56373 397 aa11.64□□□□□ -0.55
TRAF4-212ENST00000498540 CXCR4P61073 352 aa11.64□□□□□ -0.55
TRAF4-212ENST00000498540 CBX1P83916 185 aa11.64□□□□□ -0.55
TRAF4-212ENST00000498540 DGCR2P98153 550 aa11.64□□□□□ -0.55
TRAF4-212ENST00000498540 SNAPC1Q16533 368 aa11.64□□□□□ -0.55
TRAF4-212ENST00000498540 ODF4Q2M2E3 257 aa11.64□□□□□ -0.55
TRAF4-212ENST00000498540 SLX4IPQ5VYV7 408 aa11.64□□□□□ -0.55
TRAF4-212ENST00000498540 ZNF596Q8TC21 504 aa11.64□□□□□ -0.55
TRAF4-212ENST00000498540 NOL4LQ96MY1 436 aaPredicted RBP11.64□□□□□ -0.55
TRAF4-212ENST00000498540 CNN2Q99439 309 aaKnown RBP11.64□□□□□ -0.55
TRAF4-212ENST00000498540 P2RX4Q99571 388 aa11.64□□□□□ -0.55
TRAF4-212ENST00000498540 PLEKHA1Q9HB21 404 aa11.64□□□□□ -0.55
TRAF4-212ENST00000498540 ZNF286AQ9HBT8 521 aa11.64□□□□□ -0.55
TRAF4-212ENST00000498540 SLC25A19Q9HC21 320 aa11.64□□□□□ -0.55
TRAF4-212ENST00000498540 PAPOLBQ9NRJ5 636 aaKnown RBP11.64□□□□□ -0.55
TRAF4-212ENST00000498540 RBFOX1Q9NWB1 397 aaKnown RBP11.64□□□□□ -0.55
TRAF4-212ENST00000498540 TVP23BQ9NYZ1 205 aa11.64□□□□□ -0.55
TRAF4-212ENST00000498540 SLC7A11Q9UPY5 501 aa11.64□□□□□ -0.55
TRAF4-212ENST00000498540 UBE2J1Q9Y385 318 aaPredicted RBP11.64□□□□□ -0.55
TRAF4-212ENST00000498540 NUDT19A8MXV4 375 aa11.63□□□□□ -0.55
TRAF4-212ENST00000498540 MGST3O14880 152 aa11.63□□□□□ -0.55
TRAF4-212ENST00000498540 CALCBP10092 127 aa11.63□□□□□ -0.55
TRAF4-212ENST00000498540 PRKACGP22612 351 aa11.63□□□□□ -0.55
TRAF4-212ENST00000498540 LMO1P25800 156 aa11.63□□□□□ -0.55
TRAF4-212ENST00000498540 NPBWR2P48146 333 aa11.63□□□□□ -0.55
TRAF4-212ENST00000498540 ARHGDIBP52566 201 aa11.63□□□□□ -0.55
TRAF4-212ENST00000498540 SNU13P55769 128 aaKnown RBP11.63□□□□□ -0.55
TRAF4-212ENST00000498540 TRIM25Q14258 630 aaKnown RBP11.63□□□□□ -0.55
TRAF4-212ENST00000498540 HLA-DRB5Q30154 266 aa11.63□□□□□ -0.55
TRAF4-212ENST00000498540 HSP90B2PQ58FF3 399 aa11.63□□□□□ -0.55
TRAF4-212ENST00000498540 UTF1Q5T230 341 aa11.63□□□□□ -0.55
TRAF4-212ENST00000498540 TPTE2P1Q5T6R2 138 aa11.63□□□□□ -0.55
TRAF4-212ENST00000498540 OR52W1Q6IF63 320 aa11.63□□□□□ -0.55
TRAF4-212ENST00000498540 UNQ9370/PRO34162Q6UXP9 181 aa11.63□□□□□ -0.55
TRAF4-212ENST00000498540 HEPN1Q6WQI6 88 aa11.63□□□□□ -0.55
TRAF4-212ENST00000498540 BCDIN3DQ7Z5W3 292 aaKnown RBP11.63□□□□□ -0.55
TRAF4-212ENST00000498540 RTN4RL2Q86UN3 420 aa11.63□□□□□ -0.55
TRAF4-212ENST00000498540 DUX3Q96PT4 197 aa11.63□□□□□ -0.55
TRAF4-212ENST00000498540 ZNF556Q9HAH1 456 aa11.63□□□□□ -0.55
TRAF4-212ENST00000498540 SEBOXQ9HB31 216 aaPredicted RBP11.63□□□□□ -0.55
TRAF4-212ENST00000498540 MRM2Q9UI43 246 aaKnown RBP11.63□□□□□ -0.55
TRAF4-212ENST00000498540 MOB4Q9Y3A3 225 aa11.63□□□□□ -0.55
TRAF4-212ENST00000498540 SNX5Q9Y5X3 404 aa11.63□□□□□ -0.55
TRAF4-212ENST00000498540 HSPE1-MOB4S4R3N1 261 aa11.63□□□□□ -0.55
TRAF4-212ENST00000498540 LY6LH3BQJ8 138 aa11.62□□□□□ -0.55
TRAF4-212ENST00000498540 BUB1B-PAK6H3BSN5 160 aa11.62□□□□□ -0.55
TRAF4-212ENST00000498540 M0QZK8 103 aa11.62□□□□□ -0.55
TRAF4-212ENST00000498540 SIRPB1O00241 398 aa11.62□□□□□ -0.55
TRAF4-212ENST00000498540 BCL3P20749 454 aa11.62□□□□□ -0.55
TRAF4-212ENST00000498540 CD34P28906 385 aa11.62□□□□□ -0.55
TRAF4-212ENST00000498540 ERP29P30040 261 aaKnown RBP11.62□□□□□ -0.55
TRAF4-212ENST00000498540 MYCNOSP40205 109 aa11.62□□□□□ -0.55
TRAF4-212ENST00000498540 OR3A4PP47883 348 aa11.62□□□□□ -0.55
TRAF4-212ENST00000498540 SLC35F2Q8IXU6 374 aa11.62□□□□□ -0.55
TRAF4-212ENST00000498540 ADGRG5Q8IZF4 528 aa11.62□□□□□ -0.55
TRAF4-212ENST00000498540 KLHL30-AS1Q8NEE0 82 aa11.62□□□□□ -0.55
TRAF4-212ENST00000498540 GAL3ST2Q9H3Q3 398 aa11.62□□□□□ -0.55
TRAF4-212ENST00000498540 ADGRL4Q9HBW9 690 aa11.62□□□□□ -0.55
TRAF4-212ENST00000498540 LSM4Q9Y4Z0 139 aaKnown RBP11.62□□□□□ -0.55
TRAF4-212ENST00000498540 PCDHGB5Q9Y5G0 923 aa11.62□□□□□ -0.55
TRAF4-212ENST00000498540 TENM2Q9NT68 2774 aa11.61□□□□□ -0.55
TRAF4-212ENST00000498540 TRGV10A0A0A0MS01 117 aa11.61□□□□□ -0.55
TRAF4-212ENST00000498540 TRBV2A0A0J9YWF9 115 aa11.61□□□□□ -0.55
TRAF4-212ENST00000498540 C3orf84H3BNL1 204 aa11.61□□□□□ -0.55
TRAF4-212ENST00000498540 M0R129 80 aa11.61□□□□□ -0.55
TRAF4-212ENST00000498540 GNGT2O14610 69 aa11.61□□□□□ -0.55
TRAF4-212ENST00000498540 PRKYO43930 277 aa11.61□□□□□ -0.55
TRAF4-212ENST00000498540 ENTPD6O75354 484 aa11.61□□□□□ -0.55
TRAF4-212ENST00000498540 RPP14O95059 124 aaKnown RBP11.61□□□□□ -0.55
TRAF4-212ENST00000498540 SNRNP70P08621 437 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms