RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 GINS1Q14691 196 aa11.03□□□□□ -0.64
CCDC58-207ENST00000498466 SLX4IPQ5VYV7 408 aa11.03□□□□□ -0.64
CCDC58-207ENST00000498466 OR2T5Q6IEZ7 315 aa11.03□□□□□ -0.64
CCDC58-207ENST00000498466 OR52W1Q6IF63 320 aa11.03□□□□□ -0.64
CCDC58-207ENST00000498466 EGFL6Q8IUX8 553 aa11.03□□□□□ -0.64
CCDC58-207ENST00000498466 OR52N4Q8NGI2 321 aa11.03□□□□□ -0.64
CCDC58-207ENST00000498466 OR2T29Q8NH02 315 aa11.03□□□□□ -0.64
CCDC58-207ENST00000498466 CHPT1Q8WUD6 406 aa11.03□□□□□ -0.64
CCDC58-207ENST00000498466 NOL4LQ96MY1 436 aaPredicted RBP11.03□□□□□ -0.64
CCDC58-207ENST00000498466 FEVQ99581 238 aa11.03□□□□□ -0.64
CCDC58-207ENST00000498466 CADM1Q9BY67 442 aaKnown RBP11.03□□□□□ -0.64
CCDC58-207ENST00000498466 ARGLU1Q9NWB6 273 aaPredicted RBP11.03□□□□□ -0.64
CCDC58-207ENST00000498466 HHLA2Q9UM44 414 aa11.03□□□□□ -0.64
CCDC58-207ENST00000498466 SLC7A11Q9UPY5 501 aa11.03□□□□□ -0.64
CCDC58-207ENST00000498466 UBE2J1Q9Y385 318 aaPredicted RBP11.03□□□□□ -0.64
CCDC58-207ENST00000498466 MOB4Q9Y3A3 225 aa11.03□□□□□ -0.64
CCDC58-207ENST00000498466 HSPE1-MOB4S4R3N1 261 aa11.03□□□□□ -0.64
CCDC58-207ENST00000498466 V9GYS6 101 aa11.03□□□□□ -0.64
CCDC58-207ENST00000498466 ARRDC5A6NEK1 342 aa11.02□□□□□ -0.65
CCDC58-207ENST00000498466 PRR32B1ATL7 298 aa11.02□□□□□ -0.65
CCDC58-207ENST00000498466 LOC110117498-PIK3R3F6TDL0 507 aa11.02□□□□□ -0.65
CCDC58-207ENST00000498466 TOR1AO14656 332 aa11.02□□□□□ -0.65
CCDC58-207ENST00000498466 PSPNO60542 156 aa11.02□□□□□ -0.65
CCDC58-207ENST00000498466 HMGN1P05114 100 aa11.02□□□□□ -0.65
CCDC58-207ENST00000498466 FAM106CPP0CH98 169 aa11.02□□□□□ -0.65
CCDC58-207ENST00000498466 ATP6V1B2P21281 511 aa11.02□□□□□ -0.65
CCDC58-207ENST00000498466 CDK2P24941 298 aa11.02□□□□□ -0.65
CCDC58-207ENST00000498466 MNDAP41218 407 aa11.02□□□□□ -0.65
CCDC58-207ENST00000498466 ROM1Q03395 351 aa11.02□□□□□ -0.65
CCDC58-207ENST00000498466 APOFQ13790 326 aa11.02□□□□□ -0.65
CCDC58-207ENST00000498466 DOC2BQ14184 412 aa11.02□□□□□ -0.65
CCDC58-207ENST00000498466 TPTE2P1Q5T6R2 138 aa11.02□□□□□ -0.65
CCDC58-207ENST00000498466 BCL2L15Q5TBC7 163 aa11.02□□□□□ -0.65
CCDC58-207ENST00000498466 ZNF695Q8IW36 515 aa11.02□□□□□ -0.65
CCDC58-207ENST00000498466 Q8NFD4 153 aa11.02□□□□□ -0.65
CCDC58-207ENST00000498466 OR14K1Q8NGZ2 314 aa11.02□□□□□ -0.65
CCDC58-207ENST00000498466 ASB17Q8WXJ9 295 aa11.02□□□□□ -0.65
CCDC58-207ENST00000498466 EMG1Q92979 244 aaKnown RBP11.02□□□□□ -0.65
CCDC58-207ENST00000498466 CREB3L1Q96BA8 519 aa11.02□□□□□ -0.65
CCDC58-207ENST00000498466 GAL3ST2Q9H3Q3 398 aa11.02□□□□□ -0.65
CCDC58-207ENST00000498466 MOB1AQ9H8S9 216 aa11.02□□□□□ -0.65
CCDC58-207ENST00000498466 GLS2Q9UI32 602 aa11.02□□□□□ -0.65
CCDC58-207ENST00000498466 LYSTQ99698 3801 aa11.01□□□□□ -0.65
CCDC58-207ENST00000498466 SERPINE3A8MV23 424 aa11.01□□□□□ -0.65
CCDC58-207ENST00000498466 CCL24O00175 119 aa11.01□□□□□ -0.65
CCDC58-207ENST00000498466 MGST3O14880 152 aa11.01□□□□□ -0.65
CCDC58-207ENST00000498466 IGLV1-47P01700 117 aa11.01□□□□□ -0.65
CCDC58-207ENST00000498466 SNRNP70P08621 437 aaKnown RBP11.01□□□□□ -0.65
CCDC58-207ENST00000498466 SLC2A5P22732 501 aa11.01□□□□□ -0.65
CCDC58-207ENST00000498466 DUSP1P28562 367 aa11.01□□□□□ -0.65
CCDC58-207ENST00000498466 ECI1P42126 302 aa11.01□□□□□ -0.65
CCDC58-207ENST00000498466 P2RX3P56373 397 aa11.01□□□□□ -0.65
CCDC58-207ENST00000498466 SLC35B1P78383 322 aa11.01□□□□□ -0.65
CCDC58-207ENST00000498466 RBM39Q14498 530 aaKnown RBP11.01□□□□□ -0.65
CCDC58-207ENST00000498466 CCDC144NLQ6NUI1 221 aa11.01□□□□□ -0.65
CCDC58-207ENST00000498466 SLC25A26Q70HW3 274 aa11.01□□□□□ -0.65
CCDC58-207ENST00000498466 GIPC3Q8TF64 312 aa11.01□□□□□ -0.65
CCDC58-207ENST00000498466 MAGIXQ9H6Y5 334 aa11.01□□□□□ -0.65
CCDC58-207ENST00000498466 IL36RNQ9UBH0 155 aa11.01□□□□□ -0.65
CCDC58-207ENST00000498466 LINC00527Q9UJ94 153 aa11.01□□□□□ -0.65
CCDC58-207ENST00000498466 OR52A1Q9UKL2 312 aa11.01□□□□□ -0.65
CCDC58-207ENST00000498466 COPS3Q9UNS2 423 aa11.01□□□□□ -0.65
CCDC58-207ENST00000498466 TMEM14AQ9Y6G1 99 aa11.01□□□□□ -0.65
CCDC58-207ENST00000498466 STAB2Q8WWQ8 2551 aa11.01□□□□□ -0.65
CCDC58-207ENST00000498466 TRGV10A0A0A0MS01 117 aa11□□□□□ -0.65
CCDC58-207ENST00000498466 A0A1B0GTI1 187 aa11□□□□□ -0.65
CCDC58-207ENST00000498466 DHRS7CA6NNS2 312 aa11□□□□□ -0.65
CCDC58-207ENST00000498466 BUB1B-PAK6H3BSN5 160 aa11□□□□□ -0.65
CCDC58-207ENST00000498466 E2F6O75461 281 aa11□□□□□ -0.65
CCDC58-207ENST00000498466 ZNF91Q05481 1191 aa11□□□□□ -0.65
CCDC58-207ENST00000498466 KPNB1Q14974 876 aaKnown RBP11□□□□□ -0.65
CCDC58-207ENST00000498466 HLA-DRB5Q30154 266 aa11□□□□□ -0.65
CCDC58-207ENST00000498466 C9orf66Q5T8R8 295 aa11□□□□□ -0.65
CCDC58-207ENST00000498466 HEPN1Q6WQI6 88 aa11□□□□□ -0.65
CCDC58-207ENST00000498466 ENTHD1Q8IYW4 607 aa11□□□□□ -0.65
CCDC58-207ENST00000498466 ELMOD2Q8IZ81 293 aa11□□□□□ -0.65
CCDC58-207ENST00000498466 COMMD1Q8N668 190 aa11□□□□□ -0.65
CCDC58-207ENST00000498466 OR5M8Q8NGP6 311 aa11□□□□□ -0.65
CCDC58-207ENST00000498466 RAX2Q96IS3 184 aa11□□□□□ -0.65
CCDC58-207ENST00000498466 PLEKHA1Q9HB21 404 aa11□□□□□ -0.65
CCDC58-207ENST00000498466 ZNF286AQ9HBT8 521 aa11□□□□□ -0.65
CCDC58-207ENST00000498466 PALMDQ9NP74 551 aa11□□□□□ -0.65
CCDC58-207ENST00000498466 GAR1Q9NY12 217 aaKnown RBP11□□□□□ -0.65
CCDC58-207ENST00000498466 ACTR3BQ9P1U1 418 aa11□□□□□ -0.65
CCDC58-207ENST00000498466 R4GMQ9 66 aa11□□□□□ -0.65
CCDC58-207ENST00000498466 DNAH1Q9P2D7 4330 aa10.99□□□□□ -0.65
CCDC58-207ENST00000498466 IGKV1-27A0A075B6S5 117 aa10.99□□□□□ -0.65
CCDC58-207ENST00000498466 TCRBV5S2A0A599 114 aa10.99□□□□□ -0.65
CCDC58-207ENST00000498466 OOSP1A8MZH6 123 aa10.99□□□□□ -0.65
CCDC58-207ENST00000498466 SRSF10O75494 262 aaKnown RBP10.99□□□□□ -0.65
CCDC58-207ENST00000498466 CHATP28329 748 aa10.99□□□□□ -0.65
CCDC58-207ENST00000498466 ERP29P30040 261 aaKnown RBP10.99□□□□□ -0.65
CCDC58-207ENST00000498466 OR3A1P47881 315 aa10.99□□□□□ -0.65
CCDC58-207ENST00000498466 PRRX1P54821 245 aa10.99□□□□□ -0.65
CCDC58-207ENST00000498466 SNU13P55769 128 aaKnown RBP10.99□□□□□ -0.65
CCDC58-207ENST00000498466 HES1Q14469 280 aa10.99□□□□□ -0.65
CCDC58-207ENST00000498466 UBE2V2Q15819 145 aa10.99□□□□□ -0.65
CCDC58-207ENST00000498466 FAM98BQ52LJ0 330 aaKnown RBP10.99□□□□□ -0.65
CCDC58-207ENST00000498466 C16orf89Q6UX73 402 aa10.99□□□□□ -0.65
CCDC58-207ENST00000498466 PLEKHG7Q6ZR37 379 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms