RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, human

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGXB4-208	ENST00000498325	IDH3G	P51553	393 aa	Predicted RBP	4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	TAS2R20	P59543	309 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	AP3S2	P59780	193 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ZNF92	Q03936	586 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	PMPCA	Q10713	525 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	MADCAM1	Q13477	382 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ASAH1	Q13510	395 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ARL6IP1	Q15041	203 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	OR8B8	Q15620	311 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	KISS1	Q15726	138 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	TAB1	Q15750	504 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	UBE2V2	Q15819	145 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	TIMM23B	Q5SRD1	257 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ATAD3C	Q5T2N8	411 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	C6orf183	Q5T699	404 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	GLIPR1L1	Q6UWM5	242 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	SEM1	Q6ZVN7	128 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	MOB3C	Q70IA8	216 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ZNF767P	Q75MW2	155 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	GDPD3	Q7L5L3	318 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	SSX8	Q7RTT4	187 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	LYPD6	Q86Y78	171 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	SNX29P2	Q8IUI4	249 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	OR5AS1	Q8N127	324 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	TOMM5	Q8N4H5	51 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	WDR31	Q8NA23	367 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	STEAP2	Q8NFT2	490 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	OR4D6	Q8NGJ1	314 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	SMIM4	Q8WVI0	70 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	DEDD2	Q8WXF8	326 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	PIGC	Q92535	297 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	PIGT	Q969N2	578 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	MUCL1	Q96DR8	90 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	SLC25A38	Q96DW6	304 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ZNF75A	Q96N20	296 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ABHD1	Q96SE0	405 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	CST11	Q9H112	138 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	METTL9	Q9H1A3	318 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	OPN3	Q9H1Y3	402 aa	Predicted RBP	4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	NOX3	Q9HBY0	568 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	GPR173	Q9NS66	373 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ELOVL5	Q9NYP7	299 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	TAS2R8	Q9NYW2	309 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	PTTG3P	Q9NZH4	202 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	STARD10	Q9Y365	291 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	RBMX2	Q9Y388	322 aa	Known RBP	4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	MPC1	Q9Y5U8	109 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ANK2	Q01484	3957 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	NCOA6	Q14686	2063 aa	Predicted RBP	4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	RYR3	Q15413	4870 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	DNAJC13	O75165	2243 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	CACNA1C	Q13936	2221 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	MED12L	Q86YW9	2145 aa		4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	PRRC2C	Q9Y520	2896 aa	Known RBP	4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	IGKV1-9	A0A0C4DH69	117 aa		4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325		A0A1B0GUH1	482 aa		4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	LINC00854	A0A1B0GVQ3	168 aa		4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	FAM240B	A0A1B0GVZ2	78 aa		4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325		A0A1W2PR80	420 aa		4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	C5orf63	A6NC05	138 aa		4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	NAP1L6	A6NFF2	107 aa		4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	ANKRD30BL	A7E2S9	258 aa		4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	TMEM14DP	A8MWL7	114 aa		4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325		A8MXE2	369 aa		4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	LDLRAD4	O15165	306 aa		4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	LYRM1	O43325	122 aa		4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	HOXA3	O43365	443 aa	Predicted RBP	4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	CRTAP	O75718	401 aa	Predicted RBP	4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	KDM4B	O94953	1096 aa		4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	LY6G6D	O95868	133 aa		4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	CYB5A	P00167	134 aa		4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	CST4	P01036	141 aa		4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	NGF	P01138	241 aa		4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	IGKV3-15	P01624	115 aa		4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	CSTB	P04080	98 aa	Known RBP	4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	HEXA	P06865	529 aa		4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	TMEM225B	P0DP42	221 aa		4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	PSMB1	P20618	241 aa	Known RBP	4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	ACKR3	P25106	362 aa		4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	HLA-DMA	P28067	261 aa		4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	FAU	P35544	74 aa	Known RBP	4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	WNT5A	P41221	380 aa		4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	UCP2	P55851	309 aa		4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	MTCP1	P56278	107 aa		4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	PPP1CB	P62140	327 aa		4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	SSBP1	Q04837	148 aa	Known RBP	4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	DYRK1A	Q13627	763 aa		4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	GK2	Q14410	553 aa	Predicted RBP	4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	TSC22D1	Q15714	1073 aa		4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	C3orf36	Q3SXR2	165 aa		4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	PLCXD3	Q63HM9	321 aa		4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	TMEM42	Q69YG0	159 aa		4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	KRT74	Q7RTS7	529 aa		4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	NOXA1	Q86UR1	476 aa		4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	ZNF584	Q8IVC4	421 aa		4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	ZDHHC23	Q8IYP9	409 aa		4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	IZUMO1	Q8IYV9	350 aa		4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	TCTE3	Q8IZS6	198 aa		4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	CHST4	Q8NCG5	386 aa		4.52	□□□□□ -1.69
HMGXB4-208	ENST00000498325	NAXE	Q8NCW5	288 aa		4.52	□□□□□ -1.69

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